XLOC_037551 (gene) - C. hemisphaerica

Overview
NameXLOC_037551
Unique NameXLOC_037551
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:195051..200683+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037551 ID=XLOC_037551|Name=XLOC_037551|organism=Clytia hemisphaerica|type=gene|length=5633bp|location=Sequence derived from alignment at scaffold_330:195051..200683+ (Clytia hemisphaerica)
GCAAGAATAAGAATAATAAACTAACAAAACAAATGAAGAAATAACAAAAT GCTGACGCTGCAAAATTACCACATCCCCATCATATGGTAAGTCagtcatc ttcattttcaatttcattggtCATAAGAGACCTTAGCATGTATTTATTAT ATATACTTCCCTCCTTCTCTCAACTCCgtggccgggtagctcagtcggta gagcattcgccttacaatctaagggttgtgggttcgatccccggtcaccg ccaactcagcggatgatAGCTTAgaagcttagattgggtaatctgatcta ggcggtaagttactgggagctgagagtaggNcacttgccaagtgaatcgt agtgccacggtgggtatcgaactcgagcCTTCTAGACAGAAgtcaagcac gataaccactacaccactacgccgtttttaataaaaaacaaaaatgcttc tGGTTATTTTGTTTGTCAATATTTCAGTTATTGTATTACTTTTACATTAT AGTGCACATGGACACATGAACTGAAGATGGTAGGGCACTTTGACTCCAAT GTTATGTCTATTACCTAAACTGAATAACTTACATAAATGCTTGCTATTAA TTGTATTAATACACTTATTTCAATGGCATGTTTTGTCAAACTTGACAAAT TATTAAAGGAGAGAGAAAGAATTATAAATTAGTTGGATATTCCCTTGCTA CAATTAGTTTGATTAGTTGTAGCGTTTTCCTGTTAAAACAAAGTATGAAC TTTTCATCCAATGTTTACTACCTATTCTAACAAGAAACTTTTTACATGTT TGTAATGTTTAATAGGTGTTCAGGAGTGTCCATTTTTATTTACTTGACCT ATGAATGGTCTTCGATTTATTTCTTGGTTTAGCGATTACAATACTGAGCG TTTTCCTTATTGTTTTAGGTCTTTTTATGTTGTTAATTCCTGTAGGGGTT GTGGTAAGTGGACTTTAGAtaaatgttgtttttctttctttttttcatcc gTATTTTTNGGTATGAAAATGTAGTCTAATATTTTTAGCTTAGCTTTATT ACTTACTCACAACTTATCTTTATAGAGCTTTCAATGTAAATaacttgtaa acaaaaaatcaaaaacgatTTATATTAAATGGTTACGTTTTACTTCATGT CTAGAGTCTCAAAGAAATATACGTTCGATAAATTAACCTGTCAAACCCCC TTTCCTAGACACGCCTCGTTATTTATCCTTGATATCtcatcatttttgcc actttgatcattcaaaatgtatttttcacAATAATTATCTTTCTTCGTTT AGCAAGAATAAGAATAATAAACTAACAAAACAAATGAAGAAATAACAAAA TGCTGACGCTGCAAAATTACCACATCCCCATCATATGGTAAGTCagtcat cttcattttcaatttcattggtCATAAGAGACCTTAGCATGTATTTATTA TATATACTTCCCTCCTTCTCTCAACTCCgtggccgggtagctcagtcggt agagcattcgccttacaatctaagggttgtgggttcgatccccggtcacc gccaactcagcggatgatAGCTTAgaagcttagattgggtaatctgatct aggcggtaagttactgggagctgagagtaggtgtggcgcccCACCTCAgt attcgatctcccaggtctagcgcaaatagaaaaggggatagactccctca ctcccggctccgccgacagccaacagatgaatatacttacttacttactt ctCTCCACTATTTCTCTCAGTTTGAACCACGCGTGATTTTGTGCAGAGAT GCTGGCTAAATCGATCTGGCCAGCCAGGGTGCAGTGCGCAGTGCTGATGA GTCCAGTAAAGACGAAATTCATACACCTGTTCTGTCCACctaatctcctg agtgaattaAGTCGGACAGAAATTCTtgatttcttcacatatatgtTTAA TACCTTTTATTCAACATTGCAAGTTAGGACTTCCAAAAAGTGTTGCTTTT ATTTTTCTACCCCTCGAATGAGTTATTGCTTACACTTTACATTACACCAG CACTTAGTATTGATTATACATTAGATAGAAGTATAGATAGTATAGATTGA ACGATTAGGGCTCAAACTCCCGTTGAAATTCTGCTAAGATGGTCAGACCG CTAACGCAGCATTGTGTAAAACATTATGATCAGGAAAACATATTACAATA TTTCAGTGATGACCTCTTGTGAGTGAGGTCGAATATTTAGTTTTTNTTTA GGTCTTTTTATGTTGTTAATTCCTGTAGGGGTTGTGGTAAGTGGACTTTA GAtaaatgttgtttttctttctttttttcatccgTATTTTTGCGTACCTT TTCCCTTAGGAATCCGAATGAGTTGTGATAGCTTACAAAATCTTTCTCTC ATTTTCGTCGTTATTTCGTTTGACAACTTCTACAATTTCATGTTATAGGT CATCAATTTGTAATCAATACAATACCACGACGACGTCTAATCTTTCAACA TTGTTTTGTATGGATTAGTGTAAGGAGAAATCAGAACATATTACTTTCGT CAAATAGAAGAGAGTTGAGTTAAAGGTATGAAATATGTCTCTTATTTATC TTTTGGAAAATGTATGAAGGTAAATTTTTTTAAGCTGCCTTCTTGGAACT TCTTGATCAAGCACATAAAGTTCAACATCGAATTAccttttcaacggtat ataacTATGAAACATTCTGTACCCTTTTTGGTACGGTAAATTTATATAAC TGGACATTCCACGTATGATCTTGATCCAGTGACATGATGTTGTCAGAGGT TTTAAAAATGGAGAATATTCTTTATAGGTGATAAGGTTCACAGTGTTTGT TCAATTTAACCCTGGCGTGTTATTAAATTAAGCCATTTCTCTAAAATAAA ACCGTGTGATAAATGATTAATTCCTTATCCCAGTGTTTCAGTCCCTAGTT ACACTTTCGCGAAATTACACATAAAGTATCCTCTTTCCCTTCTTTTACGA ATATCAgtacaaatttttaattttgtttggcCCTTTTTCGAAGCTAATGG TGACATTATTACATAATGTTTCATACGGAAACAGCCCGGTTTTTTACCCG TAATGACAAATCTAAACTAtacaaaaattgttcaaaatttgcCATTGTCA GGTGTTTCCGTTTCTTCAAAAGAAATCATGAATTATAATATAAGCAAATA AAGGTAATACGATGCCTCGTATTGAATGTAAGTACTGTATTTAGTTTTCA TACCGCCTTCCATAATTCTCCTACTGTAaatgcatacacgttttttataa gaatacattttataataacataaggtttcgatgaccaaaatattaaggac AACTtagaatatttcaaggcttcatggactttaaaacacctaatttctta ggaaattgcacaaaaatactcacaaaatagtaGAAATGCGaacagaacat tttaaagcttagAACTGAGGTTAAAAACTTGCGTTTATTTTCCTTTATGT GTCAAAGCACCACTCAAACTTGAGGGttgaaaaatacacaaaaatctTCT CATGACAAGTGTTTTAACACTCTAACCATcgtaaaagaaaacaaactcTT TCTATCATATGTTATAAAATAAACATACAGCTTTCTAACAAGTTCTTTCT CATGTTTTTGCACAGGCTGAATATTTCCGTAGTTGGGTAATCAAACATTT TGACTATGTGAATGGTTGAGAGGACGAGAGCCTATAAATAAGTAaacttt tagagaaaaaaaagcttttaaaatctCCTTACAAGAATTAGTGATTATCC CTTATCATATTTCATTGGATGTTCGTTTATGAGCAAATATTTACTGTTTG TTCGTGTTTCTTACACGNTTGGATGTTCGTTTATGAGCAAATATTTACGG TTTATTCGTGTTTCTTACACGTGAAAGCAAACAACATTTGTAACATGAAA TTGTTGTTGTGTAGTACTACATAGTATAAAGTTCTTCTTCTGTTTTTCGG ATCTGTTAAATCTGTTAAATTGAGGGATAATATTTGATGGTTGGTTTTGA TTGCATAAATTTCGGCTCGTTCTGATTTTTCCACTACATTTGAAGAATgt gcttttttcataagaaccaggGAATTCTCAGCTGTTCTtatgtttttggt gtttttgttgcTTGGAGtgttaaattgttcttattcttaTCTCTTATTCC TAACACNCTTATCATATTTCATTGGATGTTCGTTTATGAGCAAATATTTA CGGTTTATTCGTGTTTCTTACACGTGAAAGCAAACAACATTTGTAACATG AAATTGTTGTTGTGTAGTACTACATAGTATAAAGTTCTTCTTCTGTTTTT CGGATCTGTTAAATCGTTAAATCGAGAGATAATATTTGATGATTGGTTTT AATTGTATGAATTTTGGGTCGTTTCTAATTTTTCCACTTGTTTTGAAGAA TgtgcttttttcataagaactagGAAATTCTTATTAAGCTCAGCTGCTCT tatgtttttggttttggtgCTTGGAGcgttaaattgttcttattcctATC TTATTTTTAACGCGGAAATGGAGTTTCTTTTAAGCTTATACCCAATTTGT ACAATTTATTTTGACCCttctgacacccctgtctcacgtgtaccggtgga acttcttcccacagtcgggataaaaatttctattgaaatcccagggggtg atagaaattctattcttCCCAGGTCAGAAGATCCAGTTtcgatggttttg gagtgcaattttttccatCGAATTTCAAATTGGgatgaaaacattttcaa gtGGGTGAAATTGTAGGGCATCCTTCCCACCGGGGAGGAACTATTAGCAA AATTTTCCATTGTGAAAGTAGCCCAACCGGGTCTGGTACACAGGTTTGTC TTCTGCAATTAcgaaagtttcttgtttttttgGGGGGAAATCTGGCACTC AGATTGGCTCTTTAATGCAACATtcctggatgttcttattttttcctaaa tttcagcctaaatgttcttataaattaggTTCTAATGAAATGATGTAAAG CCAAAAACCTTCAAACCACCATCATCGCTCAAGTTTTCCTCCCTTCGACA GGTTCTTTCTGgacggaaaatttaaaataaagaaatccAGTCTTCATTCA AGTTTTGTGAAACATGAATGTTTAGtatgaaaatttcatatttgacaaaa gaatattttgttgGTACATACATTTTTAAAGAGGGTAAGGTCGAAGTTTA TCCCCTTCTTCAAAAGTTTTTCCgtaaatattgatattttacaATAACTT AGAGGCTCGAAAAAGTAAAGTGAAACGTTGAAAGGCTagacaaaaaaaat gtttttcgagaGACTTTAATCAAACCTTCTTTATGGCTTGCCTGCctgtg atattttttggattccTTCATTGTTTGGTTGGTATAGTTGTCAGACCTtg cattttgataaaaacatgaCGACCACGGTCAATTCCAATGGATTTATgcc aatctttttttttgtacttttagaTTTAATCAATGCGCACCCCATGGTTG TTTAAATCACGGTTGTCAAAAAAAAGACGATATATAGATATGTTTAAATC AGAAAGgctgattttggagacatgatGGCATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059675TCONS_00059675Clytia hemisphaericatranscript
TCONS_00059676TCONS_00059676Clytia hemisphaericatranscript
TCONS_00059677TCONS_00059677Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:195051..200683 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.92 1.47 0.41 0.85 15.22 16.71 16.3 11.74 4.29 3.21 6.07 3.45 1.68 0.44 1 3.66 2.88 2.83 0.27 1.4 2.92 1.07 0.68 1.31 0.83 2.21 1.55 0.97 0.56 1.18