TCONS_00059671 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059671
Unique NameTCONS_00059671
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1377

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059671 ID=TCONS_00059671|Name=TCONS_00059671|organism=Clytia hemisphaerica|type=transcript|length=1377bp
ttcagacattaaaataaatttaatagaAGAATAATAACACAtacaaaaat
ggcaaaatgtttggatcaatgatttcaaaaataagaCAAACTTCATTGCT
GCCTCAACGAACACAACAACTGACTTAGAGAGAAAAACCACACACCTCGT
CATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacggaagaag
aagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGAACATCAT
AAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACAACATCGT
TGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCGCTTTCGA
AGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCattatttat
gattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTTTGAAACC
ATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTCGGAAATC
TCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGATGACAGT
GATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAGcagaaca
acaacaaccaccacCACCACAACAACACAACCACGAGAGAGATCTGGGGA
AAGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAGTCCTTCC
ATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTTTGGTGAA
AAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAAAAATATG
CTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGAAGAAGAC
TCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGAGAAATNG
AAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAGCGAGA
AACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGCTAAGGAA
TGAAGTATTACCAGAGAGTGATTTGGAGTTGACCATTGGAACACCGAAAG
GAAAAAGCACTCAACCCAATGAAGAGAACGATGAAGAGGAGACACCAACT
GTCGACCACAAATTCAAATTGTTCCTTGAAGACTCCTCCGATGACGAAGG
GCCAAGCAATGTACAAAATGGACGTCCTCCTCTTCAAGATCAATTGTCAT
GTGATCTTTCAGCTGCTCTTGCTGATGATGAGAGATTTGCAGACACACTG
CCCGTCGACAGTAATCAACAACAATCGCCCAATGGCAGTGCAAGCATGGT
GTGCTCTAAAGAAGGCACCATTACCAAACTGCTTACCAATGAATATGCTG
ACACCTTGCTCATCGAAAAAAAGAACG
Run BLAST on NCBI

protein sequence of TCONS_00059671-protein

>TCONS_00059671-protein ID=TCONS_00059671-protein|Name=TCONS_00059671-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MEIDATQALDLNVTEEEEENERKQVGKLITEHHKEMPSTEFEIYQGHNIV
GRDEKSEVRVTVKSLSKKHACIETSLDGSIIIYDFDSRNKTRKEKTALKP
YVRYELKHNDQVTFGNLHAKFIHLEQEQRQDDSDATGSITASETESEAEQ
QQPPPPQQHNHERDLGKVDDSDDDDDDDENSPSIFTTNTAGQVNNNALVK
SDELNSSDIVLPTQKYASENQDEAYAKDTDEEDSENEGGKQENSEEGRNX
RVRERGRRTRKLRRSEKQKTHCDWTNTRCQAKE
Run BLAST on NCBI

transcript from alignment at scaffold_330:174011..179743+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059671 ID=TCONS_00059671|Name=TCONS_00059671|organism=Clytia hemisphaerica|type=transcript|length=5733bp|location=Sequence derived from alignment at scaffold_330:174011..179743+ (Clytia hemisphaerica)
ttcagacattaaaataaatttaatagaAGAATAATAACACAtacaaaaat
ggcaaaatgtttggatcaatgatttcaaaaataagaCAAACTTCATTGCT
GCCTCAACGAACACAACAACTGACTTAGAGAGAAAAACCACACACCTCGT
CATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacggaagaag
aagaagaaaatgaaaggaAGCAGGTTACCTGAGcgtcaaaaatcattttt
tcatataGGAGAactattatatttttcttttgacttttgTTGAAACTACA
GGCGTAGCATGTCGagtttttcaaattattcttaCTCAGTTTTGAATTAT
CTTTCTACGATGTATCCTTCTATGAGTATTATCAGTTACTTCCAGTTTTT
TATTGCTCAAAATATTTGATCATTCAAGACTTGACATTTTTTCTCTCCCA
AGGTTGGCAAGCTCATTACGGAACATCATAAAGAAATGCCCTCTAccgaa
tttgaaatttatcaagGTGTGATCACTCTCTTAGTTTTCAagtgtttctt
ttcactctGTCATTAATTTTGTAAAGTATGAATTGGAGGATGATTTTAGC
TTGTGTTTCTGTTTTTTCTTATGTAtcaaataatttcaatattATTTACC
TAATAATAATCTAAAGAATTACATTCTTCTCAATCCATGTTTCTCATTTC
ATCATAGGACACAACATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGT
TACAGTCAAGGTACACATAACTATTTGTTGTTTTATTCAATAACTCTTTT
CGATTCACTGCTATAAAGCTTGGCAATTTTATTTTCTTCGTGAATAAGTT
TCCTTCAACTGTTTGTCGCTTAACCGTTATTACATCCAATTGAATTTCAA
GATACTTAGACTTTACTGCTTGATTCTGAGCTATTTGGAATTTAGAAAGG
CTTTGATTATGAACGGTGGATTTCCTTATATCCAGTCCTCTCTCATTTAC
TTTCAGTCGCTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGG
CTCCATCattatttatgattttgataGCCGTAATAAAACAAGGAAAGAAA
AGGTTTGTACGATATTTTATACCTTATAAGAaagttttttacaattttgc
TATGGCGAGTACGGAATCGAATGGTgccttgatttttgatttcaattctA
AAACTTTGTCTTTAGACAGCTTTGAAACCATACGTGCGATACGAACTCAA
ACACAATGATCAAGTGACGTTCGGAAATCTCCACGCAAAGTTCATTCATC
TCGAACAAGAACAGGTATCAATCTAATATGTCAATGATATTGCTCTTCGA
ATTTCATAATAATttcaatttgtattttatttaaaGGCGAACCTTTGTAT
CATCAGTATCATCTTTACCAGAGCAAAATTATACAGTTACAATACAATTA
CAATTCTAACGttttagataaaaataaaacaatctatTGCTCTAGTGAAG
CCGCCAGAAAATAGAATATGTAGATGGCATTAATTCTGAATTGGTTAACC
ATAGCATCCTTCATTGTTTCAGCGGCAAGATGACAGTGATGCCACAGGCT
CCATCACTGCTTCAGAAACAGAATCAGAAGcagaacaacaacaaccacca
cCACCACAACAACACAACCACGAGAGAGATCTGGGGAAAGTGGATGACAg
tgatgatgacgatgatgatgatgagaaCAGTCCTTCCATCTTCACCACGA
ATACAGCAGGCCAAGTGAACAACAATGCTTTGGTGAAAAGTGATGAATTG
AACTCGTCGGATATCGTGTTGCCCACACAAAAATATGCTTCGGAAAATCA
AGATGGTATGGTTTGATTGATGGTCTAAAAAGacattattttttattgtt
aactggttactttttcgaagcgggctacacgggcTACACGGCTCGCAAGC
tcgtcgttacttgacctcgggcaatatttctcagtacagcctttacaaac
cggtcattattgtattaatgttCACCGattctgttttttcttttgaatga
tttttagcCTTGCTAAAATTTCTATTACTCTGGCTATTTTTAAGGTGCTA
GTTTTTGAGTATCTTCAAAACTGCCCAGGCATTTGTGCTCTGCCCAAGCA
GTCATTTCAAAGTATAGCTGTTCATCATACATCACATTTTTTCTCCATCA
CAGAGGCGTACGCCAAAGACACAGACGAAGAAGACTCGGAGAACGAGGGA
GGAAAACAAGAAAACTCTGAAGAAGGGAGAAATNGAAGAGTCAGAGAACG
AGGGAGGAGAACAAGAAAACTCCGAAGAAGCGAGAAACAAAAGACTCACT
GTGATTGGACAAACACCAGGTAATCAACTTTGTTCGATTGAGACTTAAAA
CGCTCAACGTTTTGTGTGACTTAAACAAGTATAAGGTCTTAAAGCACACG
AGCGTGGGAAAGTggtaaattttttctttcttttgtttgaaaatgttttc
taaGCAAAAATGGTATGAGattttaaatgataaatttttcagcGCGCAAC
GCTCTTCcgtttgttggacctaccccggtggggtggaggtcctataaatt
aacccgtgttcgttcgttcgttagttagtgtgttagttaccagcttttct
cgagattggaacattagttttttctgatttttggcacaaaggtgcatgac
cacAAACCCTccaatgtgacggagcccgattttcgaaaaaaaaattttta
aggcaaatttgggccaaaaaacggcttaaaaacgggttttttggactttg
taaaaaattggatcattaattttttctgatttttagcatgaaagtNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatcttt
ttcaatagtgttgatagtttctctcaatagatatgctttcattttcttta
ttttttgtattttgaccagttatgtcttatgtgtttcattgtttcagttc
actgattagtttgataaccaggtaggtccataaaagtatcgcttgtttca
CTTGAATCGggataaaatattggaaacagATAGAAATCTTTTCTACTCAT
GCATGATTTCCACTTCACTACTTCAGGTGTCAAGCTAAGGAATGAAGTAT
TACCAGAGAGTGATTTGGAGTTGACCATTGGAACACCGAAAGGAAAAAGC
ACTCAACCCAATGAAGAGAACGATGAAGGTATTGCGTTGTAGAGGATGGA
GAAAGGGTCAAACAATTCTTTCGCAACgaaatcttttcatttttgtttaa
aaaaagttataaagtttttataacCAAACCACCCTGTTTGTTTTTACTGT
AGCACATGCGACTTCAGGTAACCTATCTGGTTTGAGGTGTTGTCGTATCA
GTCGTTGTAACCTTCAGAATAAAGtttaatattttgtttgtaGATGCTAC
ATGttgcttataagcatatgaaggctcagatttgcagaattcctaagcat
aacataagcatatatgtcagcctgaaatatttttcaagttgtcatttttt
atctttttaaaaaggtttggtagaggtcaagtaaacaatagacattccac
ggctagctaaattccactgctcccaaaatctgtacaaatttttacaaaat
ttctgaaatttcactaaaaacttggctcggggtgaatcaaaccatataat
aagcatactctcgggtacctaatagccggggggtttggaataagcagggg
ggttggaaaaaatctcgaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaat
taattagcggccccccccccccggctattaagtacccgagagtattaaGC
TCTGccgcctggatgctttgagaacttaagcatacacgagcctgacgaat
gggcatacacttgcttacaaaaaaacaacatgtattTTTGAAACAGAGCA
ACAGCTAGCACCAGCTTTACAAAACCAGGTGAAGGTAAAGGTTACCCAAA
GCAAAGTGGAAAAACAGCACATCACATTTTGTTCCTGTTTGTTCAAAAGT
TAGATTTGTTTCATTAAATCTTTTCCCTTGTTTCAGAGGAGACACCAACT
GTCGACCACAAATTCAAATTGTTCCTTGAAGACTCCTCCGATGACGAAGG
GCCAAGCAATGTACAAAATGGACGTCCTCCTCTTCAAGATCAATTGTCAT
GTGATCTTTCAGCTGCTCTTGCTGATGATGAGAGGTGATGATGATGGACA
CGTGCAACTTTCTTTTGAATATGACGAATTTAAATTGTCTTCATACTCAT
GTATATCCGACTTTTTTTGCAACTTCGGAATTGTTATCTAGAACGAAGAT
GAGAGATTCTATGTTGAATAACTACAAAATACGTTCTTTTAATGTCCAAT
GTAAGAAAAGAACTTTTCCAAGAGTGGGCTTAACCCTAAAGAGTGTTATG
AAAGTGCTGGGGCTAAAAACAGACAACCGCTTTGGGGATTTAATACTTGG
CGTAGCTACATTCTCATCACTTAGACCGAGgctaaatattttttcaattt
ctgggCACATAACTCAAACCTCACACTAAGCACTTTAGGAATTCATTTTT
TGTACATAAATGTTTTAGATTTGCAGACACACTGCCCGTCGACAGTAATC
AACAACAATCGCCCAATGGCAGTGCAAGCATGGTGTGCTCTAAAGAAGGC
ACCATTACCAAACTGCTTACCAATGAATATGCTGACACCTTGCTCATCGA
AAAAAGTGAGTTTCGGCTTATATCTTGGAACTTTATTGCCGTCTCTAGCA
AACTCTTTGCTTATATTATGATTGAGATTATTTTTTACCACTCATGGgta
aaatatcaaccaaccgATTGCATTGAAACCAGAAAGGTTAACTGATGGAT
AGGTGACCAAGCTTTTTCAAACTTCACCAAGAGGCTAAATGCCAAACTAT
AACTACTATATAGTTTTTAGGTAAATTAGGTTTTGTCAAATAAAGATTTT
CGCGTGAGACACAAAATTACAAGGAAAATGTGCTGCGAAAATTTCACCAG
TACACTATTAAATTTCCGAATTGTCTTGTTTGTCACGTTCAAAACGTTTT
TGAGTTGTGCTCTTTTTCTTTGTGTAGAGAACG

Coding sequence (CDS) from alignment at scaffold_330:174011..179743+

>TCONS_00059671 ID=TCONS_00059671|Name=TCONS_00059671|organism=Clytia hemisphaerica|type=CDS|length=6816bp|location=Sequence derived from alignment at scaffold_330:174011..179743+ (Clytia hemisphaerica)
ATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacggaagaaga
agaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGAACATCATA
AAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACAACATCGTT
GGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCGCTTTCGAA
GAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCattatttatg
attttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTTTGAAACCA
TACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTCGGAAATCT
CCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGATGACAGTG
ATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAGcagaacaa
caacaaccaccacCACCACAACAACACAACCACGAGAGAGATCTGGGGAA
AGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAGTCCTTCCA
TCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTTTGGTGAAA
AGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAAAAATATGC
TTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGAAGAAGACT
CGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGAGAAATNGA
AGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAGCGAGAA
ACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGCTAAGGAAT
GAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacggaagaa
gaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGAACATCA
TAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACAACATCG
TTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCGCTTTCG
AAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCattattta
tgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTTTGAAAC
CATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTCGGAAAT
CTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGATGACAG
TGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAGcagaac
aacaacaaccaccacCACCACAACAACACAACCACGAGAGAGATCTGGGG
AAAGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAGTCCTTC
CATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTTTGGTGA
AAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAAAAATAT
GCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGAAGAAGA
CTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGAGAAATN
GAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAGCGAG
AAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGCTAAGGA
ATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacggaag
aagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGAACAT
CATAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACAACAT
CGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCGCTTT
CGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCattatt
tatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTTTGAA
ACCATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTCGGAA
ATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGATGAC
AGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAGcaga
acaacaacaaccaccacCACCACAACAACACAACCACGAGAGAGATCTGG
GGAAAGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAGTCCT
TCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTTTGGT
GAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAAAAAT
ATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGAAGAA
GACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGAGAAA
TNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAGCG
AGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGCTAAG
GAATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacgga
agaagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGAAC
ATCATAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACAAC
ATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCGCT
TTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCatta
tttatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTTTG
AAACCATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTCGG
AAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGATG
ACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAGca
gaacaacaacaaccaccacCACCACAACAACACAACCACGAGAGAGATCT
GGGGAAAGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAGTC
CTTCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTTTG
GTGAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAAAA
ATATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGAAG
AAGACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGAGA
AATNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGAAG
CGAGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGCTA
AGGAATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTacg
gaagaagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACGGA
ACATCATAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACACA
ACATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGTCG
CTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATCat
tatttatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGCTT
TGAAACCATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGTTC
GGAAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAAGA
TGACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGAAG
cagaacaacaacaaccaccacCACCACAACAACACAACCACGAGAGAGAT
CTGGGGAAAGTGGATGACAgtgatgatgacgatgatgatgatgagaaCAG
TCCTTCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGCTT
TGGTGAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACACAA
AAATATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGACGA
AGAAGACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGGGA
GAAATNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAAGA
AGCGAGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAAGC
TAAGGAATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGTTa
cggaagaagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTACG
GAACATCATAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGACA
CAACATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAAGT
CGCTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCATC
attatttatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACAGC
TTTGAAACCATACGTGCGATACGAACTCAAACACAATGATCAAGTGACGT
TCGGAAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGCAA
GATGACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCAGA
AGcagaacaacaacaaccaccacCACCACAACAACACAACCACGAGAGAG
ATCTGGGGAAAGTGGATGACAgtgatgatgacgatgatgatgatgagaaC
AGTCCTTCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAATGC
TTTGGTGAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCACAC
AAAAATATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAGAC
GAAGAAGACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAAGG
GAGAAATNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCGAA
GAAGCGAGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTCAA
GCTAAGGAATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAACGT
TacggaagaagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCATTA
CGGAACATCATAAAGAAATGCCCTCTAccgaatttgaaatttatcaagGA
CACAACATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTCAA
GTCGCTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTCCA
TCattatttatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGACA
GCTTTGAAACCATACGTGCGATACGAACTCAAACACAATGATCAAGTGAC
GTTCGGAAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCGGC
AAGATGACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAATCA
GAAGcagaacaacaacaaccaccacCACCACAACAACACAACCACGAGAG
AGATCTGGGGAAAGTGGATGACAgtgatgatgacgatgatgatgatgaga
aCAGTCCTTCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACAAT
GCTTTGGTGAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCCAC
ACAAAAATATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACACAG
ACGAAGAAGACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAGAA
GGGAGAAATNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTCCG
AAGAAGCGAGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTGTC
AAGCTAAGGAATGAATGGAAATTGACGCTACTCAAGCGCTCGATTTGAAC
GTTacggaagaagaagaagaaaatgaaaggaAGCAGGTTGGCAAGCTCAT
TACGGAACATCATAAAGAAATGCCCTCTAccgaatttgaaatttatcaag
GACACAACATCGTTGGTCGCGATGAAAAATCCGAAGTAAGAGTTACAGTC
AAGTCGCTTTCGAAGAAGCACGCGTGTATAGAAACATCCCTTGATGGCTC
CATCattatttatgattttgataGCCGTAATAAAACAAGGAAAGAAAAGA
CAGCTTTGAAACCATACGTGCGATACGAACTCAAACACAATGATCAAGTG
ACGTTCGGAAATCTCCACGCAAAGTTCATTCATCTCGAACAAGAACAGCG
GCAAGATGACAGTGATGCCACAGGCTCCATCACTGCTTCAGAAACAGAAT
CAGAAGcagaacaacaacaaccaccacCACCACAACAACACAACCACGAG
AGAGATCTGGGGAAAGTGGATGACAgtgatgatgacgatgatgatgatga
gaaCAGTCCTTCCATCTTCACCACGAATACAGCAGGCCAAGTGAACAACA
ATGCTTTGGTGAAAAGTGATGAATTGAACTCGTCGGATATCGTGTTGCCC
ACACAAAAATATGCTTCGGAAAATCAAGATGAGGCGTACGCCAAAGACAC
AGACGAAGAAGACTCGGAGAACGAGGGAGGAAAACAAGAAAACTCTGAAG
AAGGGAGAAATNGAAGAGTCAGAGAACGAGGGAGGAGAACAAGAAAACTC
CGAAGAAGCGAGAAACAAAAGACTCACTGTGATTGGACAAACACCAGGTG
TCAAGCTAAGGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037549XLOC_037549Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059671-exon-scaffold_330-1491911889:174011..174233TCONS_00059671-exon-scaffold_330-1491911889:174011..174233Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:174011..174233TCONS_00059671-exon-scaffold_330-1510915933:174011..174233Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:174011..174233TCONS_00059671-exon-scaffold_330-1575043694:174011..174233Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:174463..174526TCONS_00059671-exon-scaffold_330-1491911889:174463..174526Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:174463..174526TCONS_00059671-exon-scaffold_330-1510915933:174463..174526Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:174463..174526TCONS_00059671-exon-scaffold_330-1575043694:174463..174526Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:174718..174770TCONS_00059671-exon-scaffold_330-1491911889:174718..174770Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:174718..174770TCONS_00059671-exon-scaffold_330-1510915933:174718..174770Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:174718..174770TCONS_00059671-exon-scaffold_330-1575043694:174718..174770Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:175017..175112TCONS_00059671-exon-scaffold_330-1491911889:175017..175112Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:175017..175112TCONS_00059671-exon-scaffold_330-1510915933:175017..175112Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:175017..175112TCONS_00059671-exon-scaffold_330-1575043694:175017..175112Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:175226..175324TCONS_00059671-exon-scaffold_330-1491911889:175226..175324Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:175226..175324TCONS_00059671-exon-scaffold_330-1510915933:175226..175324Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:175226..175324TCONS_00059671-exon-scaffold_330-1575043694:175226..175324Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:175583..175865TCONS_00059671-exon-scaffold_330-1491911889:175583..175865Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:175583..175865TCONS_00059671-exon-scaffold_330-1510915933:175583..175865Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:175583..175865TCONS_00059671-exon-scaffold_330-1575043694:175583..175865Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:176214..176379TCONS_00059671-exon-scaffold_330-1491911889:176214..176379Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:176214..176379TCONS_00059671-exon-scaffold_330-1510915933:176214..176379Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:176214..176379TCONS_00059671-exon-scaffold_330-1575043694:176214..176379Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:177437..177538TCONS_00059671-exon-scaffold_330-1491911889:177437..177538Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:177437..177538TCONS_00059671-exon-scaffold_330-1510915933:177437..177538Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:177437..177538TCONS_00059671-exon-scaffold_330-1575043694:177437..177538Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:178697..178844TCONS_00059671-exon-scaffold_330-1491911889:178697..178844Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:178697..178844TCONS_00059671-exon-scaffold_330-1510915933:178697..178844Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:178697..178844TCONS_00059671-exon-scaffold_330-1575043694:178697..178844Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:179229..179365TCONS_00059671-exon-scaffold_330-1491911889:179229..179365Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:179229..179365TCONS_00059671-exon-scaffold_330-1510915933:179229..179365Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:179229..179365TCONS_00059671-exon-scaffold_330-1575043694:179229..179365Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1491911889:179738..179743TCONS_00059671-exon-scaffold_330-1491911889:179738..179743Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1510915933:179738..179743TCONS_00059671-exon-scaffold_330-1510915933:179738..179743Clytia hemisphaericaexon
TCONS_00059671-exon-scaffold_330-1575043694:179738..179743TCONS_00059671-exon-scaffold_330-1575043694:179738..179743Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059671-proteinTCONS_00059671-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:174011..179743 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.34833	5.24277	2.37304	2.08612	30.6806	22.7553	10.583	11.5528	5.32402	7.76774	6.15474	4.38979	3.57563	4.51054	5.03636	6.95959	7.93518	8.10993	1.45301	2.66927	3.55354	3.30901	5.99027	6.83919	9.09876	9.28465	2.29074	0.933447	5.6976	7.5224
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059671 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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