|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000646:36109..41842+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00600.1 ID=Blg00600.1|Name=Blg00600.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5734bp|location=Sequence derived from alignment at Sc0000646:36109..41842+ (Branchiostoma lanceolatum)
GTCACGCCCTGACATAATCTGGGTCAGGTAACAACCACGGTGGATCAGCA
ACATTTATATGCCCCGAGGCCGTTCGACAACCTTTTTGTGTCCGCTGAAA
GAAACTGCGTTCGTTCACTTCAGTGCGGTTCTTTGTATGTATATCCTTGG
CTAGTTGCCCTTTTGTGTCCCCAGCCTAGACATGTGACGCGTCAGAAACC
TCGCCGAGCAACTTGTATACCGGCCCGGCCAAGGAAACTATATATACCTC
TTGTATGTACCACGCGAGAGGTGTATATGTACCAGACCACTGCAGCAGCA
GAACACAGTGGACTATTACCGCGACTCAGCTGTACCGAGGGAGATATGAC
ACCTATAGCCTGCTGAATCTGTTAGTCGCCATGCGGACATGGTTCACCAA
TCTTCTCCAGTTCGAAATTGTCGTCTTTGTGCTTGCAATGAGTCATTTCG
GAGTGTTAGTATTGTATAGCTATGGGCAGAGAGCCTCAGCACCGAGTGAC
GACTGTGACTGTGAGGAACGTACAGAATGGCGACGTATGAAACTGAGGTC
AGTCAGTGCACAAACATTAAGCTTGTCTTCAAGCAGATCGTCTGGGGCCA
GTTAAAAACCGAATTTTGCCCCAGTGTTCTGTTATGAGATCACCACATAC
CAGCGTTAAACAATCGATGCTATTTCTGGTGAGATTAGTTCTGTCTTGCT
TGTTCCTCATTGTAACTTGCAATTTTTGTTTCCAAGTGGTCGACACCAAT
CCCTTAACAGCCCACTGAACCACCCCGGCACACACCCACTGCTCCCAGCC
AGGTCAATTCAGCAGACAGACCAAGCAGTACACTAGTACGTGGCAAATCT
CACGTTAGCTTAGTCTGTCTGTCTTTGATGTGGCATTATCATTACTGAAG
TTCCAATGCGTCGGGTCAGGTAAGTGTTAGTTCTGAAAACACGTAACAGT
TCAGAAATACTGTATAGTTCACTAATTCTGCCACGCAGATAATTACAGGT
TTATTCTTTGCCCCGGGCGATATTCCCATTGTTCGCCAGCCAAAGCCTCG
TGTGCTACCACGTCTGCGGATACAGTTCGGACAATGCTCCTTTTAAAGGC
CCTGTCACACTTGTGCGTATATACAAGTCCGCATGAGTTGTGTAATAATA
TGTTTTTGGTTTAGGTTAAGTTCGCAGCCGAATTAGTGATTTCTTAGGTT
CGATCACTTGGCAGCACAACAGTGGGTGAAAGTAGAAAACAACTTTTTCC
CCCGCAAACCTTACTTAAACCAAAAATGTTAATGCGCAACTCACGCGCAC
TTGAATATACGCACAAGTGTGACATGGCCCTCACATGCATTCAGTATTAC
GATTCGTGGTTATGAAAGTTGTTTTCATCATTGTGCCAGTTAGATTTGCA
CTGCACAATCCATTGACAAATACTCGCACGATTTTTGTCCAATTGCCAGA
CCAGACCAGTCTTGTATCAAATGCTTGTGTGTTCTATTTATAGCCCGGTG
ATCGATGAGAGGCAACAAAGGTTATTGGAAAACAACTCATTACAAACCTT
AGAAGCTACAGAGAAATCACCGACCCCTGTTTTAAAGGCTAAAAAAGAAC
CTGGATCGGAAAGGTGGAAGGTGTGGATGTGGAACGGGTTTGACTTCACC
ACACTTCGGAACATAAGGTGGGATATTTCTTTATTAGACTTCTTCATTTA
CAAGATGAAGGGGGGGGGGCAATGCAGGTGATTCCTCACCTCTGCTAGTT
GCCTTCCCTGAATATTGATGGCTCGTTTCTTTGTCTCTTACGCCGTTATC
AGTTACATGTACATACAAATGTACATACATTGGGATGTGCCGCCTTGTAA
TCTTAGATGTAACATACATCATCAGCGTAGTTTTATGTCAGTGGTTTCTT
GAACAAAATGTTGTTGAAAATTCAAATCAGCAGGATCAACAACTAATGTG
ACACGGTATCCATGTGGATTCATTCCTCAACACCGTTATATGTAAGCATT
TCAAGATACAATACTGAGTCGTTGAGATGAAGTATTCATTGATTTCGCAG
AGAATCCATCTTGGAGAACACCAATGTCACCACCCACTGGTACTGCTCCA
AGGACAACATGCCGCTACATTCAACCTTCAGGTTTTATGATGGAAAACAA
CAACACAAAGTCATGAGAGGGACTTACCAGTACCTACCACAGGCAAGTAT
ACAATGTGGGGGAAGAGCTAGCAATCCCTCCCTGTAAAAATATAAAAATT
ACCTTGCTACATGCTATAGCTACATGCTGACCTAGGTGCCACTTGGCACT
CCATTGTGAACAACAACGCGGATATACTGTGCAGAGAGTACCGTGTGTTT
GCACATTTAAGTCACTGATCAAAGATATGCTTGACAGATTTTGGAGTTCG
TCATATTCCTTCCTCTCTGATTGGATAGATTTGAAGAAAAAACATTAATG
ATAAAAGATAAACCTCCATATCTAATTCATCATTTCACGTGTATCTGTCT
CAAATTGAAAAATATACGTAATTCTATGTGTCTTCTACTCATTTTCGATA
CCCATTGTGTTTATTACCGATTGAAATAATACTAGGTTAAAGGTTTTCCA
GCCCACTATTTCTCTTTATGACAGTGGAGCTGTTACATCAACCGCAGAAG
TTTTAGGCTAAAGGAACACCGAACAAAAGTTAACCTACTCATGTGTCGTG
ATGAAATGTTCTGTACTTTACGAATGAGCCACGAATAACCGCGTGCTATA
TGCGGCCCGCGCATTTAGGCGGCGTATACCTTTTATGGTGCCGCGAAATG
ATAAAATGTTTTTTCCATGTCCAGGAAACACATTTTCCCGACAAGCTGTT
CCGAACCTGCAGTGTTGTTGGCAACGGAGGGATCCTCAACGGCGGAGGCT
GTGGCAGCCAGATCGACTCCGCTGACTACGTGTTCAGGTGAGAACTTTCA
TCATGCCGGAAACGTACAGAATCGTCATACTATCTGTTGTGGCAGAAGCG
GCGACTCTTGTAGAGTGTGTTATCTGCTGGGAGCCCTCCACAAAAGTCGC
CACGGCTACACTGTAATGTGCTTTTTTACAAAGCTGCGAGTGTTCTAAAA
CGCAGCATGCTAGCACGTACTTTAATATCACATGCATTTCTTCCAACAAC
ATGTAATGTTTCTCTCAGCTCTCTCATATACCTTATAAGTTAGACGCCAT
GGACAGTTGTTGATCAAATGCCCCCCCCCCTTCATTCTTTAGAATCAACT
TGCCTCCTGTCCATGGAGACTACCAGAAAGATGTCGGCAGGAAGGCAAAC
TTCGTCACCATCAACCCTTCTCTTCTAACAGAACAGTAAGTGTGAACGAA
AAGTATCTTCTGGCATAGAGTTACGTGTGAAGAGTGTGCATGATAAAAGA
GTGTGTTCTAAGAGTGAGTGTGAATGGAGATCGTGATCTAGGATTTTACA
TATCAACAGATAGGTGAAAATGGACGATCATTTCGGTTAGGGTTAGGGTA
AGTATGGACATTGGATATAGATATTGATATCGTAACTTTTTGAAAAAAAG
ATATTTCACCTGAAACTCGACAAAAATACAGAGCAACAGGTGTCAAAATA
TGCTGGACCTGTTGACCAGAAGCAAACAAATTACCCTGACATCTTTATAC
AATCCCCGTGCCCCTTCCTGATACGCCATGTACACTATAACCATGTCGAC
CATTTTCTGTTTAAAAGGTATGGTTCGCTCAAATCGGACGTAGGTAGACA
GAACTTCACTGTCATGCTTGACTCCTACCTCGGCCCGACTACCTTCTACA
CACACCCGTTTTACAACGTCAACAGCAGACAGATGGCCTACGCCGCCCTG
CGAGTGGTCAAGAACCAAACAGCAGACGACGGGAAAACGGTTGTCTGGTC
ACACCCTGGCTTCCTCCAGGCGGCAAATACGTTCTGGAGAGAAACCGGGC
GTGTCAAGGTCAAGAGAATTACCTCAGGTTCGTTCCTGCACTGGTAGAAC
AAGTAATATCCCCAGGCCCGGTCCATAGTAATTTAATAGGATTGGTTAAA
TCTGAATACTAGATAGACGCGGTCACATACGTCGTGCGATCGTCGTACGA
TCAAAAAAACTGCATGGGTTGTATTCTTAGGATAGCCATGCATGTGTCCT
GCAAATTTCAGCTGTCTTGTTGCCAAACAGGCTGTTTTAAATCCTTGTAC
ACACTTGGTTCTGTCACAGCCTGATTGAAAATTGTGTCACAGTCTTAACA
TGACAAATATGACCGCACCATAACATAAACGTCTTGTAGTCACACAAACT
TCTTATATAACATTTCTAAACACTCTTTCTACTGGTACTGTGCCCGATGT
TTTCCAGGTCTGTTGGTCGTGACCATCGCCCTGGCCATGTGCGAGGAGAC
CCACGTGTACGGCTTCTGGCCCTTCAGCACGGACCTGGACGGGAACCCGC
TCAACTACCACTACTACGACCGCGCAGTCACCCTCCGCAGTAAGGTCGTG
TCCCAGAAGAACCAGTGGAGGGTGGTGGAGATGAACAAATATCACAAGAT
GAAGACTGAGCACGACAGACTGGCGAGGCTACACGAGATGGGCGTGGTCC
GGATGCACGTGGGGACGTGTGACGTCACAGAACAGGACGATGAACGAAGT
TGAAACACGAAGTTGAAAGAACGAAATGAGAGAAGACTGCCAATCTTAAG
TGCTGTTAGTAAAAGCGGTTTTAAAGAAGACAACTCCACGTCAGGGTTTT
GGGATCGTCTATCCCGATTTTATCTTGAGATTAAAAGAAACAGACATGCA
TATAATGTCTTCTGTAGGAAGATGGCTGATGCTTTCTGAAAGTTTCTCAC
CACAGCTTAAATTGTACTCGTCGTGAGCAACAGTTTTGTTCTTTTTTTTG
TTCTTTATGTTAAAGATATCCTAATATATCCTGTAGATATGGGTAAAACT
TTTGCGCCATGTGCAAATTTATTTGCCAGTTGATTTTAGTGACGCTGAAG
AAGAGTACTAGACATCACTCCATGCACTCGAAACGTCCGTATCTTATCCA
TTTGTACAGATTGAATTGTCTGTAAACATGTGCAATTTGTTGAACTATTT
CTGGTTTCTCTATCAAGTGAGGCTCACTCAGTTTCTAGTCAGTACAGTCG
GCAGCAAAAGTTAGATTTACCTCATGAATTGGAATTTGAACAACAACTGC
ATGAAACAAACCTCGACTTGTAATGGTAAAAAAATAACCCGATTCTGTGT
CTGTGTTGCCCTTCCGTGTTTTCCCAGCATTGTTTGTTTGTACTACATTC
TAAGATTTCTGATTTAATACAAAATAGACAACGTCTATGATCAATTAGTT
TACTAGGTAAGAAGACCCTCATATCTGGTAATATATATGAAATATATCCT
CGGCTCAGCATTTGTTGATGACAACACAACAGTGATGGAAGTATTAACGC
GTAGCGCCTAGCAATCGACAATTCAAACCTCACTTTTCTTTAGTCTGGAG
AGGTTTGTGAATTTTCCTGATGTTTTTCTCTATCTCTCTTCTAATTACCC
TCGGCTTAATACAAAAGATTAGCTCCCATGATGTTGGGAAAAGCAACTCC
TGTCCAGGAATAGCCTCTGTAACGTTGGGTAACCTAAATTCGGGATTTTT
CCGATAATGGTTGACTGAAATCAATCTAGCAGAACAATAAACCATCCTTT
TTTTCTATAATTCTGTCAGTATCATGTACTATCT Coding sequence (CDS) from alignment at Sc0000646:36109..41842+ >Blg00600.1 ID=Blg00600.1|Name=Blg00600.1|organism=Branchiostoma lanceolatum|type=CDS|length=1371bp|location=Sequence derived from alignment at Sc0000646:36109..41842+ (Branchiostoma lanceolatum)
ATGTACCACGCGAGAGGTGTATATGTACCAGACCACTGCAGCAGCAGAAC
ACAGTGGACTATTACCGCGACTCAGCTGTACCGAGGGAGATATGACACCT
ATAGCCTGCTGAATCTGTTAGTCGCCATGCGGACATGGTTCACCAATCTT
CTCCAGTTCGAAATTGTCGTCTTTGTGCTTGCAATGAGTCATTTCGGAGT
GTTAGTATTGTATAGCTATGGGCAGAGAGCCTCAGCACCGAGTGACGACT
GTGACTGTGAGGAACGTACAGAATGGCGACGTATGAAACTGAGCCCGGTG
ATCGATGAGAGGCAACAAAGGTTATTGGAAAACAACTCATTACAAACCTT
AGAAGCTACAGAGAAATCACCGACCCCTGTTTTAAAGGCTAAAAAAGAAC
CTGGATCGGAAAGGTGGAAGGTGTGGATGTGGAACGGGTTTGACTTCACC
ACACTTCGGAACATAAGAGAATCCATCTTGGAGAACACCAATGTCACCAC
CCACTGGTACTGCTCCAAGGACAACATGCCGCTACATTCAACCTTCAGGT
TTTATGATGGAAAACAACAACACAAAGTCATGAGAGGGACTTACCAGTAC
CTACCACAGGAAACACATTTTCCCGACAAGCTGTTCCGAACCTGCAGTGT
TGTTGGCAACGGAGGGATCCTCAACGGCGGAGGCTGTGGCAGCCAGATCG
ACTCCGCTGACTACGTGTTCAGAATCAACTTGCCTCCTGTCCATGGAGAC
TACCAGAAAGATGTCGGCAGGAAGGCAAACTTCGTCACCATCAACCCTTC
TCTTCTAACAGAACAGTATGGTTCGCTCAAATCGGACGTAGGTAGACAGA
ACTTCACTGTCATGCTTGACTCCTACCTCGGCCCGACTACCTTCTACACA
CACCCGTTTTACAACGTCAACAGCAGACAGATGGCCTACGCCGCCCTGCG
AGTGGTCAAGAACCAAACAGCAGACGACGGGAAAACGGTTGTCTGGTCAC
ACCCTGGCTTCCTCCAGGCGGCAAATACGTTCTGGAGAGAAACCGGGCGT
GTCAAGGTCAAGAGAATTACCTCAGGTCTGTTGGTCGTGACCATCGCCCT
GGCCATGTGCGAGGAGACCCACGTGTACGGCTTCTGGCCCTTCAGCACGG
ACCTGGACGGGAACCCGCTCAACTACCACTACTACGACCGCGCAGTCACC
CTCCGCAGTAAGGTCGTGTCCCAGAAGAACCAGTGGAGGGTGGTGGAGAT
GAACAAATATCACAAGATGAAGACTGAGCACGACAGACTGGCGAGGCTAC
ACGAGATGGGCGTGGTCCGGATGCACGTGGGGACGTGTGACGTCACAGAA
CAGGACGATGAACGAAGTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00600.1-exon-Sc0000646-1570713199:36109..36655 | Blg00600.1-exon-Sc0000646-1570713199:36109..36655 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:37602..37775 | Blg00600.1-exon-Sc0000646-1570713199:37602..37775 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:38159..38300 | Blg00600.1-exon-Sc0000646-1570713199:38159..38300 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:38933..39045 | Blg00600.1-exon-Sc0000646-1570713199:38933..39045 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:39351..39443 | Blg00600.1-exon-Sc0000646-1570713199:39351..39443 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:39826..40085 | Blg00600.1-exon-Sc0000646-1570713199:39826..40085 | Branchiostoma lanceolatum | exon |
| Blg00600.1-exon-Sc0000646-1570713199:40466..41842 | Blg00600.1-exon-Sc0000646-1570713199:40466..41842 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000646 | genome | Sc0000646:36109..41842 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00600 |
|
