TCONS_00059717 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00059717
Unique Name	TCONS_00059717
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2170

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_330:46866..56739-

transcript sequence

>TCONS_00059717 ID=TCONS_00059717|Name=TCONS_00059717|organism=Clytia hemisphaerica|type=transcript|length=2170bp
TTTCGATTTGACTAAGTGTTATTGTTCAAAATCACAACCCATGTGCGAGC
GGAACGACACGCTTCTCGgcttttgactttcaaaaagaaCATATTTTTGA
GACATTGCATTTTACTTGAATAATGGGACGAAAAAGGAGAAGAAATGGAA
AGGATCATATGGCGAAAAAAAGGGCTAATCCAGCTTGGCAAGATATTGTT
AAGGAAAATGAGAAATTCGAGACATACTACAAGAAATAAAgctataaaca
aaaacaaaaaaacaaatcaagatGTTGGTATTATTCGAAACTCCTGCTGG
ATATGCTGTATTCAagctTTTAAATGAGAAGAAACTGGCTGAGGTTGATA
ACCTctataaagattttgaaactGGAGATAAAGCCAGCCAAGTggtcaaa
ttgaaacatttcaaaaaatttgaagataCAACTGAAGCTCTCGCAGCTGC
CACTGCATCGGTAGAGGGAAAAATGTCAAAGTcactgaaaaaattgatga
aaaaggtGGCTTCTAAAGAGGTCACTGAAGAAATGGCAGTTGCTGATGCT
AAAATCGGAAACATTATCAAAGAAAAATTCGACATCAGCTGTGTTTGCTC
TTCTGCTATTCATGAATTGATGCGTGGGATCAGATCTCAAATGAACAGCT
TAATCACAGGTTTGAGTGAAAAAGAAACGACAGCCATGTCCCTTGGTCTT
GCTCACAGTTTGTCACGATACAAGTTGAAATTCTCTCCCGATAAAGTTGA
CACTATGATCGTCCAGGCTATATCACTTCTTGATGACTTGGATAAAGAAC
TCAATAACTATGTCATGAGATGTCGTGAATGGTATGGCTGGCATTTCCCT
GAAATGGGAAAGATTGTCACTGATAACCTGGCTTATGCTAAAACTGTCAA
ACTTATTGgtTTCAAAACAAACACAGCAGACAGTGATCTCTCAAGTATCC
TCCCTGAAGAAGTTGAGGAAGAAGTTAAAGCCGCTGCAGAGATCTCCATG
GGTACAGACATTTCTGAGGAAGATATTGAGAATGTCACTTACCTCTGCGA
ACAAATCATCCAGATTGCTGAATACAGAATGTCTCTGTATGATTATCTGA
AGAACAGAATGCAAGCTATCGCTCCTAACTTGACGGTTATGGTTGGTGAA
TTAGTTGGGGCTCGTTTGATTGCTCATGCAGGATCACTTCTGAATCTTGC
AAAACAACCCGCCTCCACAGTCCAAATCCTTGGTGCTGAGAAAGCTCTAT
TCAGAGCTTTGAAGACGAAGCATGACACACCAAAATATGGTTTGATTTAC
CACGCTTCCTTGGTTGGACAAACAAGCGCCAAAACGAAAGGAAAGATATC
TCGTATGTTGGCAGCGAAGACCGCATTAGCAATTCGTTACGACGCCCTTG
GTGAAGAAATTGACACAGAAATGGGAATTCAAAATCGCGCAAAACTCGAA
ACAAGAATTAGATTCCTTGAGGAGGGTGGTATGACAAAGATCAGTGGTAC
TGGCAATGGAAAAGTTCACAACGCCAAGAAACACAGCATCAAAAGCGAGG
ACAACATTCCAGTTTACGACAACGGAATGGATTCAACACTCGGCAAGAAG
CGCAAAGTGAAAGAGGAATCAGACAGCGATGCAGAAGATACGAAACCCGT
CATCAAAAAGAAGAAGGTCAAGAAAGAACCAGTTGACTCTGATGAAGAGA
TGGAGGAAAAAcctaagaagaaaaagaaagtcaaGAAGGAGGAGCCcgaa
gaagaggaagaagaaacTGAACCagtagagaaaaagaaaaagaagaagaa
gaaggctGCCGAACCTGAAcccgaagaagaagaagagGAGGTCGTCGAGA
AGAAAgataagaagaaaaagaaaaaaaagaagaagaccGAAGAATCCGAT
TCTGAATGAATTCAAATCGAAACTTCCCCAAaaatgaaactcaaaaagtc
ataAAGCTATATTTACactaaacattttttatctCGACATatattggaat
tttttattttttaaaagttttatcgCTCAGGGTATATTTGGCTTACTAAT
GGTTGTGTcgattttgtatattttttgtcGTCTCATTTACGTCgcgttat
tttgaaaataaagacgtCTTTAATCTTTTGTAAATTAATTTGTCCTTTCA
TTGTATCAAATGAGGTCTAT

Run BLAST on NCBI

transcript from alignment at scaffold_330:46866..56739-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00059717 ID=TCONS_00059717|Name=TCONS_00059717|organism=Clytia hemisphaerica|type=transcript|length=9874bp|location=Sequence derived from alignment at scaffold_330:46866..56739- (Clytia hemisphaerica)
TTTCGATTTGACTAAGTGTTATTGTTCAAAATCACAACCCATGTGCGAGC
GGAACGACACGCTTCTCGGCTTTTGACTTTCAAAAAGAACATATTTTTGA
GACATTGCATTTTACTTGAATAATGGGACGAAAAAGGAGAAGAAATGGAA
AGGATCATATGGCGAAAAAAAGGGCTAATCCAGCTTGGCAAGATATTGTT
AAGGAAAATGAGAAATTCGAGACATACTACAAGGTATACATCTTTTAAAT
CCACCTATTTCCTGCCAGGATCTTTCTCTGACTATTTGAGTGCGACAAAA
CCTTTAAAAGAGGGCCCTAGACAAATATAAGTTTTGGTAGGACACTATGA
TGCTTTTATAAAGATTTTAATCAGGGGGTGGTCAGTACAGTGTACACAAC
GGCGGAATGTATCCTGGGGTTTGGTGGGTGTTTGAGTAAAAAAAAATTGT
CATGTACTACACCAACCCTGTTCCCTGCATATTATCAACTTTTTTATGCT
TACTGATAGACAGTGTAGCTGGAACCTCGATATTCCAGGATTAGAAAAAG
CTATACCTGTTATCTTTTTTCTTTTTTCTTTAAAAAAGAAAAAAGATAAC
AGGTATAGCTTTTTCTGGGTGCATGTCCGACACTTTCTAGTCCGACAGTA
AAATAGTTCGAATCTATAAAATAAATTTACAATTTGGAAGTCTTTTGTNC
GACACTTTCTAGTCCGACAGTAAAATAGTTCGAATCTATAAAATAAATTT
ACAATTTGGAAGTCTTTTGTTCCGACGTCACTTTTGTCCGAAAACGGAAG
ATTTTAGAGTGTCGAATGTTGAATAAGGGTTTTTCACTGAGATAATATTT
TAATAAAATTTAATTTTGGCAGCATTTTGACATAATTAGAAATAAAGGAC
CGATCAGGGTTGTAAATCACTAAAGAAGGGTCGTAAAACAACAGCCAAAT
CCAATTTCTTCACTCTTAAAAGCCTAATCCTAAGGGATCTTCGACAAAAA
ACTTTTTGAATTTTTTATCGGCATTGGGCCGATAAGGGGGTGGGGGGGGT
CCAACTACATATTGATAAAAAAACAAGTATTGTGACGAAAATCCTTTCAG
CCAATTTCTTTCTGATTTTGTCCACTAACTCCACTGAAAGCATATGATTT
CACTTGCTTTCACCTTTGCGCGCAAATTCGCAACTTTAAAAGTACAGTTT
TGAAATAGCTTTGATAAAAAACTTTTTCATTGGCCAGCGCGCTGCCTTTT
CCTTCGAAATGTTGCGACTTCATCCTGTCATTTTCACTTTCGTTTTGATT
AACAATATCAATGCGGGTATGAACAAACTCAATGTTGGTGCACAAATAGA
CAAAAATTCAACGATGGGTGGGAAGGCGATGGGTGGGAAGGCGATGGGGG
ACAAGATTGGAGGAAATTGTGTTTTCGAAGATGTAAAAGTTGGATTTGAA
TTTGGCCGATAAGAGCAAGGGGGGAGGGGGTCAATGCCGATAAAAAATTC
AAAAGTTTTTTGTCAAAGACCCCTAACAAGCTTCCCAAAATTTAAGAAAA
GTCAGGTTTAGAGGCCTAACCTCAAAATCGGGACTTTGGATTATTAAATA
AAAGATGTGCCTCCTCTTCCGCGATTCATATTTCATTTTTTATGTTTTTT
TGACTCGTTGTCGGACAAAATTGTTGTCGGAATACTGACGCATTCGTCAA
ATCCAACGTCGGACATTTTTACTGTCAGACTAGAAAGTGTCGGACTACTG
ACGACCTCCCCTTTTTCTAATCCTTTAAAAAGAATCAACAAGCCATCAAC
ATCGATAAATTACACACATTTCCTCATAAACTTTTAAGATTATCTGCCAT
TATGACTTTCTTGAAGCGGTTCCGAAATTAACCAATCGGGTTAGGTATCG
GAATTCCTATGGGAGTTCTTTTCCGAGATTTGTAAAATAGCTTAGTCAGC
AAAAAAACTTTTCCCGGAGGTTTGAGGAATAAACAGAACTGTTATCATTT
GTTTTTTATTTAACCATATATTTAAATTTGCGCTCAAAAACACTTAAATA
AATAAGTTAATAATATTTAATATACTACTTGTATCTCTCAGAAAATAAAC
ACTTACAGAACGACATAGTTTATCATTTGGAATACCCCCGTGTTTGGNAT
TCCTGGCAAAAAAGAATGGCGTGTTTTCAATCGCAATGGAAAAGAAATTG
AAGAATTTACTGAAGAATTAGCTCAATCTACCAACAGTATCAAAGCAACA
ATGTTCCCCCCTTCAAAGAAAGTTGCTGATGATATCAATTTGGAAAGGTG
TATGCGAATCTACCCACACTTGCAGAATACCGGTGGTTTCTTTATTGCTG
TTTTGGAAAAGAAAAATGATCTTCCCTGGCAAAAGAGCAAACGCGTTTGG
AAAAGCCTACCTTGGGATGAATGTAACACCAAAGAGTCAAAACTTGATGA
ATCAGAGGCTAAATCAACTGAACAGGTTGCCGAAAATACAGAGGAAACAA
TAACTGTTGAAGCCAGCGAGGATGAGAATCGTGGGGAAGAAACTGCCAGT
GATGACGAGCCAGCATCAAAACAACCTTGCATTGATGAGGAATCTCTCAA
TAAACCTGATGAATCTCTCAATAAGGATGGTGAATCTCAACCGACTAAAG
TAAAAAGAGGGGCAATCAAAGAAGATCCTTATATCTTTCTTGATGACTCT
GACAAAGATCTCTCTGATATTCGAAAATTTTATGGACTTTCCCCTGAATT
ACCTTCCAAACAATTTCTTGTGAGGAGCACTGGTGCAATTAAAAAGAGAC
ATATTTATCTTGTGTCGGAAAAAGTTCATCAAGTAATGAGTGAAAATAAA
CACTTAAAAATTATCAACACTGGTGTAAAAATAGTCACCCGTTCACCATT
TAGAGCAGGTCAAGCAGAACATGGTGTAGAGTTTAGACTTGTTCAGGATG
GTCTTCAACTTGTTGAAAAGTTTTTGAAAAATAGAATTGTACCTATTCGA
TCTGGTGATCTTGTTAATCTGATTTCAAATTTTGAAGCCAAAACAGCAGG
ATTTGATCTGGAAACACAAGCTACCATGGAGAAGATTGATATGGGTTGTG
TGGTTTGGCATTTGGATACTTCAAAGACAAAGGAAGGTGAGATATCGTTG
TCAAGCGACCTTTTCCTGTGTGGTCACATGGGGAGAAATGCTGTCCAAGT
CATGTTGAATAAGGAGGACCGAAGGCACTACCTTAGACTGCTTGGTGTTC
CAATACCAGAGGAATTGGGAAGGGTTGTCAAGGGTCCAAGTTGGGGAGAC
CAGCCAGCCAAAGAAAATCAACAGGGCGAAAACACTGATGAAAAACCAAA
GGATGTGCTTGAAGAACAAAAAGCTCCAGCTGAAGTGGCTCTATGATTAC
CATTGTAATTTTATTACCTGCCTAATTTTTAAAATTTAACAATTTTACTA
GTTTTTAAAAGATTCTTTTAATCAAAGGACCAGTTATTATAATTTGATCT
TTCAATAATTTGTGTGTATTTGATTAGACCATGAAAGGATTTGTTTTGTT
TTTGTTCTTTGCTTTAGCAACCTTAAACTAGACTGTATGACAAGAGAATC
CTGTTAATCTATCAAAGTTTTTTCATTTAACTTTTGCATAATTCGCCAAA
GGAAATGCTGTGTCTGATAAAAAAATCTTTATGCTTGATTTTTCAAAATA
CATTGTAGTATATCTAATTTATTTAAACTTAATAAAAAGTTAATGTCTCC
CTTGTTTTTCTTTACTTTCTTTCAGAGAAACAAAGTTCACCTTTAAACGA
TATTCGTTTTTTTAGTAAAAGAAACAATGTGCAGAATAATGAACAAAAAT
GAAAATGATTTTTTAAATAATATTCTGTTCTCTTTCAGAACTTTATAGGT
ATATTCATTTTATTTATTCATTTATCTTAGAAATAAAGCTATAAACAAAA
ACAAAAAAACAAATCAAGATGTTGGTATTATTCGAAACTCCTGCTGGATA
TGCTGTATTCAAGGTATTTATTTTTGTTTATACTTTTTTATATTTTCTTC
AAACTTTGTTTATAATGGTCAAAGATAAAGGCTTGCCTAATTCACACTGG
TTTCTGATTACTTTAACTCTGGATTATGAAAGTTTAATGGAGACTACCAT
TTTAGCATTTTTAGATACTTATACATATTTTATTTTTACTTTTAGCTTTT
AAATGAGAAGAAACTGGCTGAGGTTGATAACCTCTATAAAGATTTTGAAA
CTGGAGATAAAGCCAGCCAAGTGTAAGTTTAAAGTTGTACTGTCGCGAAA
CACAGTAAATTTTAAAGCTCTTTGTAACCTGAATTATTACATCATAAGAG
TCTTAATGTCAATAGAATTTGTCATGTTGGAAGATCGAAAATAGGAAAAG
GTAAAACTGGTTATTGAAACTTTTAATTTGTTTTTTCAGGGTCAAATTGA
AACATTTCAAAAAATTTGAAGATACAACTGAAGCTCTCGCAGGTAATTTT
TAAATGGTTGATATGCAATTTGTCATTCTCAGGGCTTTTTTCAAAGACCA
ATTCAATTTTCAGTTGAAAAAAATATCCAGGTTTGCTATTGTTATTGTGT
CTTTGTAACAACTTGATATTAATTTAGTTAATCTATTTCTTTGTAGCTGC
CACTGCATCGGTAGAGGGAAAAATGTCAAAGTCACTGAAAAAATTGATGA
AAAAGGTGGCTTCTAAAGAGGTCACTGAAGAAATGGCAGTTGCTGATGCT
AAAATCGGAAACATTATCAAAGTAAGAATTCTATAGATTTTACTATATTT
CTATATTTTTTACTTGTTCCTTGGCAGTTCTTTTGCATGTTAATAACTTG
ATTTGACTAGTATTATTGAATTCTTATCTTTTGCATGTTTTAGGAAAAAT
TCGACATCAGCTGTGTTTGCTCTTCTGCTATTCATGAATTGATGCGTGGG
ATCAGATCTCAAATGAACAGCTTAATCACAGGTAATGTTGTCTTCATTGA
ATAATGTAAAAAGCTTTTGATTTATATGATTAATTGTTAATTTTTGTTAG
ATTTATCGAAAAGTCTAAAAATGACTTACAACAATAACTTGTATATTTTA
GGTTTGAGTGAAAAAGAAACGACAGCCATGTCCCTTGGTCTTGCTCACAG
TTTGTCACGATACAAGTTGAAATTCTCTCCCGATAAAGTTGACACTATGA
TCGTCCAGGCTATATCACTTCTTGATGACTTGGATAAAGAACTCAATAAC
TATGTCATGAGATGTCGTGAATGGTATGGCTGGCATTTCCCTGAAATGGG
AAAGATTGTCACTGATAACCTGGCTTATGCTAAAACTGTCAAACTTATTG
GTAAGCATTCTTCGTCGTTTTTTAATCCAAAGCAAAAACTTCAAAAACTT
TATATTTAAAGATTTTATCTGCCTTTATCTCAAATTTAATTGATTTGTTC
AGATTTGTTTAGATTTCTTCTGTGCTTGATGTTAATGAATTTTTTTTTAA
TTCAGGTTTCAAAACAAACACAGCAGACAGTGATCTCTCAAGTATCCTCC
CTGAAGAAGTTGAGGAAGAAGTTAAAGCCGCTGCAGAGATCTCCATGGGT
ACAGACATTTCTGAGGAAGATATTGAGAATGTCACTTACCTCTGCGAACA
AATCATCCAGATTGCTGAATACAGAATGTCTCTGTATGATTATCTGAAGA
ACAGAATGCAAGCTATCGCTCCTAACTTGACGGTTATGGTTGGTGAATTA
GTTGGGGCTCGTTTGATTGCTCATGCAGGTAAATATTAAGCAGATATAAA
AATCAGATATCGAAAATTATTCAGTCGAGCTGAATCACTAAAACGAGACG
GAATAATTTCGATATCCGATTTTTCACGTTGAATATATGGTTTATTGTTC
ACCCATTAGCAGGAAAGCATTTAAATTTTCCCTATTGTGTATTGCATTCA
GTCTTTCTGTACTGTTCTGTATGATATTTTCGAACGTTTTACTATCTTAT
TTAAGGATGTCAATTTCATTGTTTTTCTCTTTTTAATTACAAAACGTTCG
AATTTGCTTTCTCTTTTGTTAAAAAGAACTTTCTTTTTATCTGTTTTTAT
ATATGTGACACATTTAAATTATTTGATCAAAAACCTGTTTTCTTTATGCT
CGCTGCTACAGAAGAGATATTTTGCTGTCGGATATCTAAAAATATTTGAT
AGTGCGTTTTGCTTAGCGGTAGACAATAAACCTAATTGTAGTATGTTTTC
GAAAGTGAAATCGATAATAAGTATAATCATCTTAAAAACCTACTTTTTGA
AGCACGTGTCTAATTGAATTCATCCTAATAATTTATTTTAATTCAATACT
ATACTGTTTGATAGGATCACTTCTGAATCTTGCAAAACAACCCGCCTCCA
CAGTCCAAATCCTTGGTGCTGAGAAAGCTCTATTCAGGTAAGTTGTTATG
GTTCCCCACCAGTCCCCACAGAAAGTTCTGTTAATTTCAAACCTCGCTAC
AAAGTTTTGTGATGGTATTGGGAACTCGGGGTTGAATAAATCAAGTAATC
TTTATTCTTTTATAGAGCTTTGAAGACGAAGCATGACACACCAAAATATG
GTTTGATTTACCACGCTTCCTTGGTTGGACAAACAAGCGCCAAAACGAAA
GGAAAGGTAGGTTGTCTATTCTTTCGCTAAATTTCTTTGTTACGTTTCAA
CGGAAATTTTAAAATGCTTATGTTTTGGTTCAATTTTAATGATTGGACTA
GAAAAATTGTCGAAAAAATGTTTCGATTTTTTTTACTTTCGCATCTAGAT
ATCTCGTATGTTGGCAGCGAAGACCGCATTAGCAATTCGTTACGACGCCC
TTGGTGAAGAAATTGACACAGAAATGGGAATTCAAAATCGCGCAAAACTC
GAAACAAGAATTAGATTCCTTGAGGAGGGTGGTGTAAGTGGTTTCATTGT
TTTGACCCTATTAAAGCTTTCCCAGATGTTAAAATTCCCTTTTAATTTAC
AAAACAATATATTAGTGGCTTTTTGACCTACTTAACTTAACGNTTATTCT
TTCGCTAAATTTCCTTGTTACGTTTCAACGGAAATTTTAAAATGCTTATG
TTTTGGTTCAATTTTAATGATTGGACTAGAAAAATTGTCGAAAAAATGTT
TCGATTTTTTTTACTTTCGCATCTAGATATCTCGTATGTTGGCAGCGAAG
ACCGCATTAGCAATTCGTTACGACGCCCTTGGTGAAGAAATTGACACAGA
AATGGGAATTCAAAATCGCGCAAAACTCGAAACAAGAATTAGATTCCTTG
AGGAGGGTGGTGTAAGTGGTTTCATTGTTTTGACCCTATTAAAGCTTTCC
CAGATGTTAAAATTCCCTTTTAATTTACAAAACAATATATTAGTGGCTTT
TTGACCTACTTAACTTAACGTAACGTTCCTTCTTGCTCCATTTTTATTGT
GAAAAATCTTCCCAGGAAACTTTTTGAAATATTTTTCCCCAACAAGATAT
AGTAATTGCAACTGATTGCAAGATTTATCCCACTCTTGAAAATCGCATTA
AAACGAGATAAAAGTAAGGCTCTTTCCGATAATGAAACTCTTAAGCTATC
TGAGTTTTGTCTGAAACCTTTCTTGGCTTTACCTCGAGTTTCAGTCTGCG
ATTGGGCTTGTGTCTAGAAATTCACGGGATTTGGGTTTAGACTTAAGACT
TAGGATTAATAGAAGACGGAGATTCCGGAAAACGTTTGAGAGTGTCTGGT
CTGGGAATCGGCTTTAGTCTCGAAACTATCAGGAAACCAGATAATTGGTC
ATAAAAACTTTGAACATCCTTATACTTGTAAAAAAATTATTGAAACCATC
CTTATCATCCCTTTAATTTCCGTTCAAAATATTGTTTTCTAGATGACAAA
GATCAGTGGTACTGGCAATGGAAAAGTTCACAACGCCAAGAAACACAGCA
TCAAAAGGTATAGAAGTCACAACTAGCATCATTGATGTTTTGTTTCTCTT
GTGATTCACTTCTTATTGACTCGTCAGTTTATTGTGATTCACAAAGTTCT
TTCTGAGATGCTAGTAATCTTTGAGAAGACAAAATAATAAAAAAGGTAAC
TAAAATAAATTTATCTTGTGCATNGTCTTTGAGAAGACAAAATGATAAAA
AAGGTAACTAAAAGAAATTTATCTTGTGCATTAATTTTGTTGTCAAATTA
TTGCGATTGTAACATCTTAAGAAAGTAGCTTTTAGATTGATTCTTTTACG
TTATTTATACTATGATGAACCTTCTAGATTTTTGCAAACTTTTTATCACC
CCTTCAATTTTTTAACATTTTGCCCACTTCAAGCAAAACATGTTCACAAT
TAACCAGCTAAATTTTAGCTAGACTTTTTTCCGGTAACCTTTGATTGTGA
TAAAGAACTGGAAAAGCATTGTTCTAAATTTCCTGATATTTGAATCTTGT
CTATTCTTAGCGAGGACAACATTCCAGTTTACGACAACGGAATGGATTCA
ACACTCGGCAAGAAGCGCAAAGTGAAAGAGGAATCAGACAGCGATGCAGA
AGATACGAAACCCGTCATCAAAAAGAAGAAGGTCAAGAAAGAACCAGTTG
ACTCTGATGAAGAGATGGAGGAAAAACCTAAGAAGAAAAAGAAAGTCAAG
AAGGAGGAGCCCGAAGAAGAGGAAGAAGAAACTGGTAAACTTTCTTCTCT
CTTGTCAATGACACGTGACATTTGCTCACACAGTTTCTATGAAGCCTTAT
ACGAACGTTTTCCCTCCTAAAAAACTGATTTTCTTTCGATTACTGCTTGC
GGTTGTTTTATTTCCAAAAATTTGAAGGTTTTATCGCAATCGGGAATTCT
CATTTATAATTGAAACCAATCTATATTCACTTCTTAATAGATCTTATCGG
AGGATTGTTTCGGGGGTATTACAATAGAAATCTCTTAGGAATTCCTCGAG
GGAATTCTATTGTAATACCCCTGAAACAATTGCATCGCTGTTTCAGAAAA
ATCAAAAACTCCGTTTGTATCGTTTCCATGTTCGTTCTAGTCAGATTCTA
ATATCAAGTTTCTCTTTTCATAGAACCAGTAGAGAAAAAGAAAAAGAAGA
AGAAGAAGGCTGCCGAACCTGAACCCGAAGAAGAAGAAGAGGTTTGTTGT
TCATTACACCGTATTTTGACCGTGGCCGCCAATTGTCGTGCGGGCTTTTT
TTGCCCGTGTTACCACCCTAAAACCGTCCCAGTCTTTTTTTCGCACCTAA
AGACAATAGAAAAAAGTGTGTATTGTCATCGTCAATCTCTTTTTTCATCC
CATATTAAGAACTTTACCTTCGACAAGAGAGCAGCTTAGATTGCTCTGCA
TAAATGCATGCTACTATAACCGTTATATTATGTAGTAGAATGCATAGACC
TGACAAAAGCTGTTATTAAGCATAACTTAAGTTCTTTTATCGCTTCGTGA
AAACCATGTTATGTTAAGACGAGGTGAAGAGAGCTGTATCAAGGCGACAT
TCAAAGAACCGTAAACTAATAAATTCATTGTCTTCTTTTAGGAGGTCGTC
GAGAAGAAAGATAAGAAGAAAAAGAAAAAAAAGAAGAAGACCGAAGAATC
CGATTCTGAATGAATTCAAATCGAAACTTCCCCAAAAATGAAACTCAAAA
AGTCATAAAGCTATATTTACACTAAACATTTTTTATCTCGACATATATTG
GAATTTTTTATTTTTTAAAAGTTTTATCGCTCAGGGTATATTTGGCTTAC
TAATGGTTGTGTCGATTTTGTATATTTTTTGTCGTCTCATTTACGTCGCG
TTATTTTGAAAATAAAGACGTCTTTAATCTTTTGTAAATTAATTTGTCCT
TTCATTGTATCAAATGAGGTCTAT

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_037564	XLOC_037564	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_330	supercontig	scaffold_330:46866..56739 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.7494	51.5241	20.2999	15.6518	282.89	221.278	147.466	159.864	83.6673	99.2354	62.6953	66.3716	70.3763	81.1898	98.4825	127.152	103.66	103.123	9.70246	14.9527	96.4336	101.45	81.6362	76.6425	71.5879	81.6596	59.6987	41.8834	65.5924	64.7517

Blast

[Close]

BLAST of TCONS_00059717 vs. Swiss-Prot (Human)
Match: NOP58 (Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1)

HSP 1 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 313/460 (68.04%), Postives = 377/460 (81.96%), Query Frame = 2

Query:  272 MLVLFETPAGYAVFKLLNEKKLAEVDNLYKDFETGDKASQVVKLKHFKKFEDXXXXXXXXXXSVEGXXXXXXXXXXXXVASKEVTEEMAVADAKIGNIIKEKFDISCVCSSAIHELMRGIRSQMNSLITGLSEKETTAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYVMRCREWYGWHFPEMGKIVTDNLAYAKTVKLIGFKTNTADSDLSSILPXXXXXXXXXXXXISMGTDISEEDIENVTYLCEQIIQIAEYRMSLYDYLKNRMQAIAPNLTVMVGELVGARLIAHAGSLLNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLVGQTSAKTKGKISRMLAAKTALAIRYDALGEEIDTEMGIQNRAKLETRIRFLEEGGMTKISGTGNGKVHNAKKHSIKSEDNIPVYDNGMDSTL---GKKRKVKEESDSDAEDT 1642
            MLVLFET  GYA+FK+LNEKKL EVD+L+K+FET +KA+++VKLKHF+KF+DT EALAA TA +EGK++K LKK++K    KE  E +AVADAK+G +IKEK ++SC+ S  ++ELMRGIRSQM+ LI G+  +E  AM LGLAHSLSRY+LKFS DKVDTMIVQAISLLDDLDKELNNY+MRCREWYGWHFPE+GKI++DNL Y K ++ +G + N A + LS +LPEEVE EVKAAAEISMGT++SEEDI N+ +LC Q+I+I+EYR  LY+YL+NRM AIAPN+TVMVGELVGARLIAHAGSLLNLAK  ASTVQILGAEKALFRALK++ DTPKYGLIYHASLVGQTS K KGKISRMLAAKT LAIRYDA GE+  + MG++NRAKLE R+R LE+ G+ KISGTG   +   +K+  KSE  +  YD   DSTL    KKRK+ E+ D + E T
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLK-KIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKA-LAKTEKYEHKSE--VKTYDPSGDSTLPTCSKKRKI-EQVDKEDEIT 455

The following BLAST results are available for this feature:

BLAST of TCONS_00059717 vs. Swiss-Prot (Human)

BLAST of TCONS_00059717 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOP58	0.000e+0	68.04	Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1...	[more]

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TCONS_00059717 (transcript) - C. hemisphaerica