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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059411 ID=TCONS_00059411|Name=TCONS_00059411|organism=Clytia hemisphaerica|type=transcript|length=741bp
GATGATATTTTGTTGATCAAACATTTCCAAATAACGAACATTTCCATACC
TACCAACATAATGAAGAACGTTCCAACCATTATCATTCACCAGTGAAAAA
TCTTGCGGATATTCCATCAAGTGAATGAAGaagtaaaatttaattttaag
acGACTGAATTTAAAAGTGTGATGGAAAATACTTGGGATGATATTTTGTT
GATCAAACATTTCCAAATAACGAACATTTCCTTTCCATACCTACCAACAT
AATGAAGAACGTTCCAACCATTATCATTCACCAGTGAAAAATCTTGCGGA
TATTCCATCAAGTGAATGAAGaagtaaaatataattttaagaCGAGTGAA
TCTAAAAATGTGATGGAAAAAACTTGGgatgatatttttttgatcAAACA
TTTCCAAATAACGAACATTTCCATACCTACCAACATAATGAAGAATGTTC
CAACTATTATCATTCACCAGTGAAAAATCTTGCGGATATTCCATCAAGTG
AATGAAGaagtaaaatataattttatgaCGAGTGAATCTAAAAGTGTGAT
GGAAAATACTTGGGATGATTTTGTTGATCAAACATTTCCAAATAACGAAC
ATTTCCATACCTACCAACATAATGAAGAATGTTCCAACCATTATCATTCA
CCAGTGAAAAATCTTGCGGATATTCCATCAAGTGAACGAAGaagtaaaat
ataattttatgaCAAGTGAATCTAAAAATGTCATAGAAAAT Run BLAST on NCBI transcript from alignment at scaffold_327:210425..211813+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059411 ID=TCONS_00059411|Name=TCONS_00059411|organism=Clytia hemisphaerica|type=transcript|length=1389bp|location=Sequence derived from alignment at scaffold_327:210425..211813+ (Clytia hemisphaerica)
GATGATATTTTGTTGATCAAACATTTCCAAATAACGAACATTTCCATACC
TACCAACATAATGAAGAACGTTCCAACCATTATCATTCACCAGTGAAAAA
TCTTGCGGATATTCCATCAAGTGAATGAAGaagtaaaatttaattttaag
acGACTGAATTTAAAAGTGTGATGGAAAATACTTGGGATGATATTTTGTT
GATCAAACATTTCCAAATAACGAACATTTCCATACCTACCAACATAATGA
AGAACGTTCCAACCATTATCATTCACCAGTGAAAAATCTTGCGGATATTC
CATCAAGTGAACGAAGAAGTAAAATATAGATTTAGAACTTTTATCTCCAT
TTCGAGTTGACCTCTATGTAACGAGTTGATTACGTTTACGATTTCCATCA
AGTGAACGAAGaagtaaaatataattttaagaCGAGTGAATCTAAAAGTG
TGATGGAAAATACTTGGGATGATTTTGTTGATCAAACATTTCCAAATAAC
GAACATTTCCATACCTACCAACATAATGAAGAATGTTCCAAACATTATCA
TTCACCAGTGAAAAATCTTGCGGATATTCCATCAAGTGAATGAAGaagta
aaatataattttaagaCGACTGAATCTAAAAATGTGATGGAAAATACTAT
CGATGATTTTGTTGATCAAACATTTCCAAATAACGAACATTTCCAGACAT
ACGAACATAATGAAGAACTTCCAACCATTATCATTCACCAGTGAACAATC
TTGCAGATATTCCATCAAGTGAATGAAGaagtaaaatataattttaagaC
GAGTGAATCTAAAAATGTGATGGAAATTACTTGGGATGATATTTTGTTGA
TCAAACATTTCCAAATAACGAACATTTCCTTTCCATACCTACCAACATAA
TGAAGAACGTTCCAACCATTATCATTCACCAGTGAAAAATCTTGCGGATA
TTCCATCAAGTGAATGAAGaagtaaaatataattttaagaCGAGTGAATC
TAAAAATGTGATGGAAAAAACTTGGgatgatatttttttgatcAAACATT
TCCAAATAACGAACATTTCCATACCTACCAACATAATGAAGAATGTTCCA
ACTATTATCATTCACCAGTGAAAAATCTTGCGGATATTCCATCAAGTGAA
TGAAGaagtaaaatataattttatgaCGAGTGAATCTAAAAGTGTGATGG
AAAATACTTGGGATGATTTTGTTGATCAAACATTTCCAAATAACGAACAT
TTCCATACCTACCAACATAATGAAGAATGTTCCAACCATTATCATTCACC
AGTGAAAAATCTTGCGGATATTCCATCAAGTGAACGAAGaagtaaaatat
aattttatgaCAAGTGAATCTAAAAATGTCATAGAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059411-exon-scaffold_327-1491911889:210425..210632 | TCONS_00059411-exon-scaffold_327-1491911889:210425..210632 | Clytia hemisphaerica | exon |
| TCONS_00059411-exon-scaffold_327-1510915933:210425..210632 | TCONS_00059411-exon-scaffold_327-1510915933:210425..210632 | Clytia hemisphaerica | exon |
| TCONS_00059411-exon-scaffold_327-1575043694:210425..210632 | TCONS_00059411-exon-scaffold_327-1575043694:210425..210632 | Clytia hemisphaerica | exon |
| TCONS_00059411-exon-scaffold_327-1491911889:211281..211813 | TCONS_00059411-exon-scaffold_327-1491911889:211281..211813 | Clytia hemisphaerica | exon |
| TCONS_00059411-exon-scaffold_327-1510915933:211281..211813 | TCONS_00059411-exon-scaffold_327-1510915933:211281..211813 | Clytia hemisphaerica | exon |
| TCONS_00059411-exon-scaffold_327-1575043694:211281..211813 | TCONS_00059411-exon-scaffold_327-1575043694:211281..211813 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:210425..211813 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR020683 | Ankyrin_rpt-contain_dom |
Blast
The following BLAST results are available for this feature:
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