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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000509:72382..78681+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg02143.1 ID=Blg02143.1|Name=Blg02143.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6300bp|location=Sequence derived from alignment at Sc0000509:72382..78681+ (Branchiostoma lanceolatum)
TTCGACTTTATTCAAATCTTTTTGTAACATCTTAACCTATGTGACCATCC
TTTTTTTCAGCAAAAGCTAGCTGAAGCTACAGGTGAATCCACACAAGACA
TGACAGACTTCCCTTCACCTGATCCCACACACGACACTGCACCGTCAGAT
GTGGAGAACACAAGTACCGCCCAAGTAATGTCAGAACTGAGCAAGGTAAT
TTTTTTCTTTTCTCTTTATTTGTATACATATGTATACATATGTATGCTAC
CATGCATCTGCAATACATTAGTGCCAAGGGCAAGAAGTTTAATGTTTGTT
AGGGTCGGCTACTTCTCACTGCACAAAATGCCCTCTTTATGCATACCTTA
AAGCATTATAATGTAAAAGCTCCACTATCTTACTCTACGGTGTAGAAACA
GAACCCTTTATGCATGCCTTAAGGTGTATTTGAAGATCAAATTTCATGCA
CTGTCCCCAATTTGATTTCTTGATTTTTGTGCAGTACCCAACCCTATTTA
TAGCTGATGAGTCTCTGTCACTCTTGGCAGCAGTTAATAGCTTAATTTGG
ATACATGGCTAGTAAATTTAGTCAGGAAGTGAAAGTTCAAAATCCATAGC
TCAGAGTGTTAGTAGCCAGTTTAATGTGTTGACTTTGTGGCTGCTCTGTT
ATCATTCAGTTTGGGTTCATCATAGGATAGATGTGTTTTTTTAAATATTC
ATTTTTTTGCATTGCCCCACTTCATTTAGCTCCCTTCAAAATTCCAAGAA
TCAACAAATAGAATTGGTGTGGCTTGATAAAACACCATCTGGAAGCTTTA
ATTAAGTTTGCAATGAAGCAGTCAAACAAAACCAGGGTCTGCCAAAAATA
TCAAGAATCACCATGATATTTCTTTCTCTAGATTCCTCTTGCAGACATGG
ATCCTAAACTCCAAAATGTCACCAGCACAAGCTTAGACATATTGGAAGAG
TTTGTCACAGCTGTGAGTGAAGATGAGGTTAAAGATTACCACAGGGCAGA
GGAGAAGCTGGTTTGTCTTCTGCTTGAGTTGGATACTCACCCAACTGATG
GTAGTGGGGACAGGAAGCAGGCTGTGGATTATGTGATCCACTGTACAAAG
CTGCTGGACCTGCATGCTCAAAGGAAGGCCAAAGACAAGGTGAGCACAAT
CTGTCTTGCATATTGAGTCTTGATATTCAATTTACATTACTGTATACATG
TACTATGTGGTATCAAGCCTGGGTACCAAACCCGAGGGTTGGCTTACGGG
TGATTTTCTTACCCCTGCCTTTACTAAGCACAGGCGATCTATACCCACGG
GCCTATCTCCAGCTGGTTTCTCTTTATCCACTTGCTAATCTTCTATTACG
CCGAGCGAAGAATCCTATCATAAACTGTATGTATAAAGCTACCCCCGGCG
CACGGTAATTGGGACCTGGGTTGGCGGGGGGCAACAGTACCAGCACCAAA
GAGACACCACTGAGCTCATGATATGTCTCACTGCCTACCAGGCTATATAG
TATCAATTGTGAAAGATGAACTTGAACACCAAACTGTATTTTTTCAATCA
GATGGTATGGGCTGGAAAAATTTCGGCATTCTGATAGGATGTAATTCTAT
AGATGTTAAAGCCTGAAGCCAACGTATGAAAAGGACCAAAAACTTTCTAT
CACACTAAGATTATGGCCTTGCTTGGTAAAACGTTTAATCAGTTTCCATT
TCCCTCAGACTGGGGTCTTTGTTTCACTTAAGACTTGTTGAACTTGCGTC
ATGTATTCCTTGCACTAGTCTGAAGCAAACCCAGCAAATAAACAGAGGCT
TGCATGTTTTACTTTTCAGTTGCATGAAATTGAAAGGAAGCTGGAAGATG
GCACTAGTACAGCTGATTGTGCTGAGAGGCTGCAGAGAAGAAGAGATGAT
TTGAGGAAGTTACTTTGTAGACTTAAGGTATATGTACCTCAAAACCCTCG
GTTTTTTTATCCCATTTACAGTAATTGTAGGGCCGAAAGCACAGATGAAG
CAATCATTGATAGCATGTAGTGTTAATGTATGTCTGGTTATATAATGTCT
GCTTACATTAAAGCTGTGTGGTGTTCACTATACCAACTAAGTTCTTGACC
ATTGCTAAACTGGTTTGTAAAGTTATCATGATGTTTTGTACTGTTCGGAA
TTGCTTTTGTATCCCAAATCAACTGATAAAGATATTGTTTCAGAATTTTG
GTTTAATCTAATTTGGCATTGATCTATTTTGACACACAGGACGACACTAC
AGAAACTCCTGTGGGGGATGGAAATGAGATGAATGTTCAACCTGCAAAAT
CAACATCCCCAGAAGAAACTAGTGAGGTAACTTGAATGAATCATCTCTAG
ATCTGGCTCAATACTCAGTTGCAGACAGAGTGCATTGCATTTAAGATGAA
ATACTTACAACCCATATTCTAAATCTAAATTCAACGTCCTATCAGAGGGA
CATCCCAGGACCGTTACCAAAGCTACTCATTTTCATGTCAAGTGAGGAAA
TACAATGTAGGTGTAAAGTGCCCTTCCCAACGGCACAACATTGCAACCCT
GTCAGGGATTGAACTAAGTACCTCTAAGTTCTCAGTCAACAGCCCTCACC
TCAAGGCCAAAATGCCACCTTTTCTCTGTTCGTCCCTCAGCCAGCTTTTT
TTAAAAGCTTTCTTGTTCCTAAATACAGGACAGTGATGAATACCATGAGG
ACCAGATATGGTACTATGAGGACCAAGAACTACTCAGCCTTGATGAGGAG
AATGCGGAGGTTGAAGAGGTTGAAGAGGTTGAAGAGGAACTGGATGAAAC
AGAAGAGGTGGAATTGGAGGTTGAGGAAGAAGATGTTGAAGACCATGATG
AAGATAGTGACAAAAGTCACACTTTGTCTTGGATAACAGCATTCTTACTT
TACCTCAGTGTATGGAAATCTAAGTTCAATGTTTCAGACAATGCACTTGT
TGTACTGCTTACTATTTTAAAATCTTTTCTGCTTGCTTTGTGCAACTTGT
TCAATGTCAAAATAGCAGAAACCCTTGCAACATTCTTTCCAGAGACACTG
TACACATTCCGAAAGACATTAGGATTAGATAGAGATGACTTTACGCGTTA
CGTTGTCTGCCCATCATGCGATATGGTCTATACAAAAGATGAAGCAAGAA
TAGCGATAAGGGATAGGCATGGCAAAATTGTTGGTTACAAGTCAGCAAAA
TGCTCTTTTGTTGAATTCCCAGCACACAACCAAAGAAAATTCCGTCGTCC
GTGTGGAACATTGCTAATGAAAACTTTTTATCGCAAGGATGGGCAGAAGG
ATGTTCGTCCAAAAAGAACTTTTTGCTACCGAAGTATTGAAAAATCTCTG
CAAGACTTGACCTTAAGACCAGGGTTTTTTGAAGACTGCGAAAAGTGGAG
AAATAGAAATGTTTCAGAAGGCGTGTATGGTGATATATATGACGGGAAGG
TGTGGGCTGACTTTCAGTATTACGATGGTGAGCCCTTTTTGGCCGAACCT
TGCAACCTCGGCCTCATGTTCAATGTCGACTGGTTTCAAGTGTACGAAAA
TGTTAAGGATTCAGTTGGTGTCATGTATATGGTAGTAATGAATCTACCGA
GGGAGCAGAGGTTCAAAAAAGAAAATATAATTGTGGTTGGTATAATACCT
GGGCCCAGGGAGCCTGCAAGGCATATCAATGCTTATTTAAACCCACTGGT
TGAAGAAATTCATAGATTATGGCATGGTGTATACCTCTCAGACACCTCCC
CTTTAGGAACAGAAATGTACAGAGCAGCCCTGTTGTGTTTATCCAGTGAT
GTACCTGCCACCCGAAAGTCTGCTGGTTTTCTTGGACATATGGCAAACAA
AGCGTGCTCAAAATGTCTAAAAACGTTTCCAAGAGATAAAGACAACACTG
TAGATTATTCTGGGTTCTACATTGATGAATGGGAGCCACGTACTAAGGCC
GTTCATGTTGACACTGCTGAAAGGTCAAAAGCTTCCAAGACAAAGTCTGC
ACAAAAGAGAGTTGAGGCTGAATTTGGTGCAAGGTATAGTAGTTTTTATG
AACTACCGTACTTCGATCCAATAAGGATGCATGTAGTGGACCCCATGCAC
AATCTTTTAGAAGGAACGGCAAACAGGGTTCTCCAGATGTGGAAAGAAAC
AAATGTACTAACCAATTCAGCATTCAAAACCATGCAGTCAAGGGTGGATA
ACATGAGGGTTCCCTCTGACCTGGATGGAGGACTTCCAGGTAAAATTGAA
CATTCATTTGATGGCTTTAAAGCTGCCCAATGGGAACACTGGGTGTGCAC
ATACTCCTTGTGTGCCCTTAAGGGCACACTTGATGATCAAGACTATAACA
TCTGGAATTGTTTTGTAACAGCAGCCAGGATACTTTGTAACAGAGTGATA
ACTACTCAAAAACTTAATGAAGCACATGAATGTCTTAAAATATTTTGCAA
TCGTTTCCAACGCAAGTACGGTAAAAATTGGTGCTCGATGAACATGCATT
TACATCTTCACTTGAAACAATGCATACACGACTATGGGCCTATCCAGGCC
TTCTGGTGTTTCGCATTTGAGAGGGCAAACTATACATTGGGTGAGTACCA
TAACAATAATCGTGATGCCGAAGTCATCATAATGCGTAAATGGTTGTTAG
ATTGGCAAGTTGCNATCATAATGCGTAAATGGTTGTTAGATTGGCACGTT
GCAACTAAACAAAAGTGCGAAGTGTTAGGGGACAATATGGTACCACCTGT
ATCAGTTTTTATGGAAGGAAAAAAACGTAGGGAAGGTCATGTCTTGACCA
TGGAAGAATTAGACATGCTGAATAGGCTCTCAGAAAGTGATGAGTTACAT
AGTAGAAATTTGGCTTTTGATAGCAAATCTGAAGTACTCCTTCCGCCATT
GAAATCAGCTTATATGAGTTTGGATGACAACCTTAAAATAGTTGATATGT
TTGAAATCATGTTTCCCGACTGTGTTGTAAGTAGAGTTTCTTTGAAATAC
ACAGAATTTGATAGATGTTCTCTATCAGGAGAGCTTGTATCATCAGAAGG
ATACCGAACAGATGCTTCTTCTTGCATTTATGCCAAGTGGTTTGGAAATG
AAAATGTTATTGACCCTAGTGCAGAACCAAGGCCAGGAGTTGTAAGCAAC
ATGATGAAAGTATCAGTTTTTCTGAATACTGGTGGCCCAGGTGAATTAAA
CCTAGTTTATACTTTGGCCGAAGTCAAGTTGTTCAAACAACATGGGGACA
GATACCACTATGGTAGGAAGGATCTGTGTTCTGTGTGGGAACCTAGTTAT
GAACCATTTTCGCATGCCTCTTTCTTGCCTTTAAGGAGAATTGTGAGTCG
CTGTGCTTATTCGAAGGCCAAGGTAACGCTGTCGGCCACTAGAGAAGAGA
CAGTGTACACAGTTGTACCTCTATCATCTGTACGATGTATTTGAATTGGG
AACTCAGCAGCTACAGCCAGGCGAAACATATCATTTAGCAAACAACCATT
GGAAAAAATTTAAGTCGATATTGAAAATTACTTCAATTTGCATGTGTTTA
TGGATAATTGTTCATCCATTGATAGCAACTTCATTTATATACCTCCTTTT
TAAAAGAAAGCACCTTGATTTATGGCAATAATCCCATTAAAACAAAATCA
AAGAAAGACTTTAAAGATAGTGCTCTCAGATTTTCTAGGAGTGATCTTGA
AAATTAAGTTGTTAGACTGGATATTGCATCACGAGTCTGCAGGGGGGGCA
GTTCCTTATTTATTGAATTACAAAATGGTTAAAGTGACTTATTCCTTGTT
AAAAGTTAATTTTGTATTCATTTAAATGTGGTATTGTAAACAATGATAGC
CGCTGCTGCTGTTGAGTCCCCCCTTAACTTGCCTGGATCAATGGGACAGT
TTTATGCTGGTAATTGAAACAAAAAAACAGAAAATACATAAGTGTGTGCT
GGTATATTGATAACTGCTGTATTCCGTTCTCACTGTGTTGCACTCTCAGC
TTTGTACACAACTTTCAGATACAATAGGTATGCATATAACCATTCTGGGT
CCCAAATATCAATGATGATACATAATGATTGTACCAGTCTATCATATGAC
GCTTGGGTAGTACAGGCTGTATAATTGCATGTATACATTGTTATGTATCT
TTTATTACAAATACCGTATGGNTACAAATACTGTATGGATACAGTTGACT
GTACTAATGGTGTTTATAATCTTTGTCCCGCTGAGGGGAAGAAAATTTAA
CCTACAAATGTATGTCCAGAGAAAATAAACAGAGGTGGGTGGAAACATGA
Coding sequence (CDS) from alignment at Sc0000509:72382..78681+ >Blg02143.1 ID=Blg02143.1|Name=Blg02143.1|organism=Branchiostoma lanceolatum|type=CDS|length=3315bp|location=Sequence derived from alignment at Sc0000509:72382..78681+ (Branchiostoma lanceolatum)
ATGACAGACTTCCCTTCACCTGATCCCACACACGACACTGCACCGTCAGA
TGTGGAGAACACAAGTACCGCCCAAGTAATGTCAGAACTGAGCAAGATTC
CTCTTGCAGACATGGATCCTAAACTCCAAAATGTCACCAGCACAAGCTTA
GACATATTGGAAGAGTTTGTCACAGCTGTGAGTGAAGATGAGGTTAAAGA
TTACCACAGGGCAGAGGAGAAGCTGGTTTGTCTTCTGCTTGAGTTGGATA
CTCACCCAACTGATGGTAGTGGGGACAGGAAGCAGGCTGTGGATTATGTG
ATCCACTGTACAAAGCTGCTGGACCTGCATGCTCAAAGGAAGGCCAAAGA
CAAGTTGCATGAAATTGAAAGGAAGCTGGAAGATGGCACTAGTACAGCTG
ATTGTGCTGAGAGGCTGCAGAGAAGAAGAGATGATTTGAGGAAGTTACTT
TGTAGACTTAAGGACGACACTACAGAAACTCCTGTGGGGGATGGAAATGA
GATGAATGTTCAACCTGCAAAATCAACATCCCCAGAAGAAACTAGTGAGG
ACAGTGATGAATACCATGAGGACCAGATATGGTACTATGAGGACCAAGAA
CTACTCAGCCTTGATGAGGAGAATGCGGAGGTTGAAGAGGTTGAAGAGGT
TGAAGAGGAACTGGATGAAACAGAAGAGGTGGAATTGGAGGTTGAGGAAG
AAGATGTTGAAGACCATGATGAAGATAGTGACAAAAGTCACACTTTGTCT
TGGATAACAGCATTCTTACTTTACCTCAGTGTATGGAAATCTAAGTTCAA
TGTTTCAGACAATGCACTTGTTGTACTGCTTACTATTTTAAAATCTTTTC
TGCTTGCTTTGTGCAACTTGTTCAATGTCAAAATAGCAGAAACCCTTGCA
ACATTCTTTCCAGAGACACTGTACACATTCCGAAAGACATTAGGATTAGA
TAGAGATGACTTTACGCGTTACGTTGTCTGCCCATCATGCGATATGGTCT
ATACAAAAGATGAAGCAAGAATAGCGATAAGGGATAGGCATGGCAAAATT
GTTGGTTACAAGTCAGCAAAATGCTCTTTTGTTGAATTCCCAGCACACAA
CCAAAGAAAATTCCGTCGTCCGTGTGGAACATTGCTAATGAAAACTTTTT
ATCGCAAGGATGGGCAGAAGGATGTTCGTCCAAAAAGAACTTTTTGCTAC
CGAAGTATTGAAAAATCTCTGCAAGACTTGACCTTAAGACCAGGGTTTTT
TGAAGACTGCGAAAAGTGGAGAAATAGAAATGTTTCAGAAGGCGTGTATG
GTGATATATATGACGGGAAGGTGTGGGCTGACTTTCAGTATTACGATGGT
GAGCCCTTTTTGGCCGAACCTTGCAACCTCGGCCTCATGTTCAATGTCGA
CTGGTTTCAAGTGTACGAAAATGTTAAGGATTCAGTTGGTGTCATGTATA
TGGTAGTAATGAATCTACCGAGGGAGCAGAGGTTCAAAAAAGAAAATATA
ATTGTGGTTGGTATAATACCTGGGCCCAGGGAGCCTGCAAGGCATATCAA
TGCTTATTTAAACCCACTGGTTGAAGAAATTCATAGATTATGGCATGGTG
TATACCTCTCAGACACCTCCCCTTTAGGAACAGAAATGTACAGAGCAGCC
CTGTTGTGTTTATCCAGTGATGTACCTGCCACCCGAAAGTCTGCTGGTTT
TCTTGGACATATGGCAAACAAAGCGTGCTCAAAATGTCTAAAAACGTTTC
CAAGAGATAAAGACAACACTGTAGATTATTCTGGGTTCTACATTGATGAA
TGGGAGCCACGTACTAAGGCCGTTCATGTTGACACTGCTGAAAGGTCAAA
AGCTTCCAAGACAAAGTCTGCACAAAAGAGAGTTGAGGCTGAATTTGGTG
CAAGGTATAGTAGTTTTTATGAACTACCGTACTTCGATCCAATAAGGATG
CATGTAGTGGACCCCATGCACAATCTTTTAGAAGGAACGGCAAACAGGGT
TCTCCAGATGTGGAAAGAAACAAATGTACTAACCAATTCAGCATTCAAAA
CCATGCAGTCAAGGGTGGATAACATGAGGGTTCCCTCTGACCTGGATGGA
GGACTTCCAGGTAAAATTGAACATTCATTTGATGGCTTTAAAGCTGCCCA
ATGGGAACACTGGGTGTGCACATACTCCTTGTGTGCCCTTAAGGGCACAC
TTGATGATCAAGACTATAACATCTGGAATTGTTTTGTAACAGCAGCCAGG
ATACTTTGTAACAGAGTGATAACTACTCAAAAACTTAATGAAGCACATGA
ATGTCTTAAAATATTTTGCAATCGTTTCCAACGCAAGTACGGTAAAAATT
GGTGCTCGATGAACATGCATTTACATCTTCACTTGAAACAATGCATACAC
GACTATGGGCCTATCCAGGCCTTCTGGTGTTTCGCATTTGAGAGGGCAAA
CTATACATTGGGTGAGTACCATAACAATAATCGTGATGCCGAAGTCATCA
TAATGCGTAAATGGTTGTTAGATTGGCAAGTTGCNATCATAATGCGTAAA
TGGTTGTTAGATTGGCACGTTGCAACTAAACAAAAGTGCGAAGTGTTAGG
GGACAATATGGTACCACCTGTATCAGTTTTTATGGAAGGAAAAAAACGTA
GGGAAGGTCATGTCTTGACCATGGAAGAATTAGACATGCTGAATAGGCTC
TCAGAAAGTGATGAGTTACATAGTAGAAATTTGGCTTTTGATAGCAAATC
TGAAGTACTCCTTCCGCCATTGAAATCAGCTTATATGAGTTTGGATGACA
ACCTTAAAATAGTTGATATGTTTGAAATCATGTTTCCCGACTGTGTTGTA
AGTAGAGTTTCTTTGAAATACACAGAATTTGATAGATGTTCTCTATCAGG
AGAGCTTGTATCATCAGAAGGATACCGAACAGATGCTTCTTCTTGCATTT
ATGCCAAGTGGTTTGGAAATGAAAATGTTATTGACCCTAGTGCAGAACCA
AGGCCAGGAGTTGTAAGCAACATGATGAAAGTATCAGTTTTTCTGAATAC
TGGTGGCCCAGGTGAATTAAACCTAGTTTATACTTTGGCCGAAGTCAAGT
TGTTCAAACAACATGGGGACAGATACCACTATGGTAGGAAGGATCTGTGT
TCTGTGTGGGAACCTAGTTATGAACCATTTTCGCATGCCTCTTTCTTGCC
TTTAAGGAGAATTGTGAGTCGCTGTGCTTATTCGAAGGCCAAGGTAACGC
TGTCGGCCACTAGAGAAGAGACAGTGTACACAGTTGTACCTCTATCATCT
GTACGATGTATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg02143.1-exon-Sc0000509-1570713199:72382..72576 | Blg02143.1-exon-Sc0000509-1570713199:72382..72576 | Branchiostoma lanceolatum | exon |
| Blg02143.1-exon-Sc0000509-1570713199:73263..73520 | Blg02143.1-exon-Sc0000509-1570713199:73263..73520 | Branchiostoma lanceolatum | exon |
| Blg02143.1-exon-Sc0000509-1570713199:74201..74308 | Blg02143.1-exon-Sc0000509-1570713199:74201..74308 | Branchiostoma lanceolatum | exon |
| Blg02143.1-exon-Sc0000509-1570713199:74621..74707 | Blg02143.1-exon-Sc0000509-1570713199:74621..74707 | Branchiostoma lanceolatum | exon |
| Blg02143.1-exon-Sc0000509-1570713199:75060..78681 | Blg02143.1-exon-Sc0000509-1570713199:75060..78681 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000509 | genome | Sc0000509:72382..78681 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg02143 |
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