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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:208949..214129- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00027.2 ID=Blg00027.2|Name=Blg00027.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5181bp|location=Sequence derived from alignment at Sc0000280:208949..214129- (Branchiostoma lanceolatum)
TGGAGCCATTGTATCGGTTGCTAGGGGACGCGCTAGCCACTGCGCAAGTC
CGGAAGTAAAGACCCAGTGTCACCGTTCGTGCGGACGCCAGAAGCACTCG
GCGCAAATTATTCGCTCAAGAAACGTACAAGTTTGACGGTATGTCGTCTT
AAAATGCTCTAATTGTCTTGCAGTTTTGTTAGAATCTGACTTAAGATAGC
TGTCGTCGGTGAACACAGTTCCTGTTTTCCATAACGATGTGTATATTTGT
TGTTTTGACCAACAACAGGTTGTTTTGGCTCGTTATACCTCGGTACGCGG
TATCAAATTGGCACAATACAAATTTAAAGCAGCAGCTGGACAGATCATTG
TAAACGGTCAGACGTTTCAGATAGCATCCAATTTCTTTCGCAGTGACCGA
GGAAAATCCAACAGGTGGTATTCTATAGTATAGAGCAAAAACTATGAGTG
ACTTAATATTGTACTAAATCGTTACTCTCCAAGCAGAGGTTGGTCTCTGG
CTGGTTTTTGATGTGTTTCTAGGCGTTTTTGTCGGGCTTTCTATTTTGTC
CTGTTTTCTCTATGTCACCAGCCCACATAAAGAAAACGTGACCAAGTAGA
AAGATCGACAAAAACGCCTAAAACACGTCAAAACCTCTGCTTGGAGAGTA
CTGAATCGCCAATAGAAAACACACTGTAAGGTACAGGTGTAATACGATCA
CGAAAGTAGGTCATGTAAACAAGATGGCTAATGGAAATTATTTAATGCTA
AAAATGATATTGGTTTAATTCTGTGCCTAAATCTGCATTGAATTTTATTT
GGCAAAGATTCCAGTCTCAGCCATGTACTAAAATGTTGTTGTCCTTGTTT
AAAGTCTATTGTTTCGCTAGACATGGTCTCTTGGTGCTGGGTTTCACTTG
GTTCAGTTACAAAATGCAAAGTCATTGTCTCTGGTGTTTACGTATTGGTG
ACTTGTGCTTGTGTTTAGCTGGAAGTGTTTCTAGGAGAGCGCGTCGAGTC
TGTGCGTACTCTCAATGTACGTAAGGATTTCCACGGCCACGGGTACCAGG
TGTGACGCCAAATTTCTGCCCCGCCAGATTTCTGCTTCGTATGGTTGGGG
ATTGGTTTAGAGCTAGGGCTAGCAATTAGGATTAGGGTCGAGTTAGGGTT
AGGGTTAGCCTCCACAGAGCGACCCCTCCTTCCAAAGTTCTAACAGACTT
CTGCTAGGAATATTAGCCCACTCGTAGATTCGAGTCCGCACGTGCAGTGT
CAAAGGTGAAGGCCCCTGGCTTGTAAACAGTTCTTGTTTCGATATTGTCT
TTTGTTTGCAAAGCACTGCCCAGACGATTTTGGTTACGTCTAAAGGGCCT
TCACCTTTGATACTGCGCATGCCTACTTGAATCTACAAGTGGGCTTATTT
ACCACGCAACAAGAGTATGATCCACTTCTTTCACTTCAGGTATACTGAAA
AACCCCTAGCAGTGTTGGGGCATTTATTTGGCAGGGGACTGAATGACTGC
ATTACTATTACAGTAACCAATGTATCAAAAGCATTAGACAGGATACTGAA
CATAAAGATTCCCCTTTGGTTCAAATGCACAGGACAGAAGAGTCGAGACA
TCTCCAGAGATATCATGGCGGTTGAACCTGTAGTTGCTCAGCCTGGAATG
GCAGAACTGCCCTCTGAAACAGGTTTGTATCAGTATCTAATATCAAGTCT
CATAGTTCTGCATGTTCTGCATGCAAGCCACACTTTGAAAAATAATGGTG
AATTATTAAAAAAGATGTGCTAGATGCAGCGTTAGCAATCCCCAAAGATG
GCACACGTCGGATATCCAGGTGTTCAAAGTCCTAGATAACACGGTCTTAG
GATAAAAGAAAATTTGGAGCTAAAGCCACCCTCTCATTGGACCCGGGGCA
CGCTGGCGGCGTCGCTGCATCCTAAACTGGATTTGTGTTACCCTTGACTT
TATAATGGGAATATCGTTCAAAACGTACAAGTATGACCAAAAAGACAACA
AAACACACATTAGCTTAAAAATATTCGTTTTTTGTCGATGAAATTCGATC
GGCCGCAGCGACGCCGCCAGCGTGCAACGGGTTCAGTGAGAGGGGGGCTT
AAGAACTCCGGCGGTATTAAGTGATTTGTGATTACCACCCTGATGAAAAT
ACATTGCATTTTTTATTTCCTATATTTGCAGCACCAGGAACTGAGCCGGG
CAGTCCGCTGCAGGTCAGGAACATGGAGGCAGAAGACATCGAATTTGTCT
CTCGAATGTTGGTGGACGCTTTCAGTGATAAGTTTGAACACGCGGTTGGC
AAGAGTCGGTAAGATTTCCGTAAAGTATATTCAGTTTCATGCGTTGGCTA
GAGCCCTCTCCATTAAATATCTTCTAACCCTTTCTCATTTCTCAGTGGCT
TTTTGAAAGCACAAGCTCATTAGTATGTTTCACAAATGCCTCAGCTATGA
TTAAGTGAAATGCAAATGAGCACCTCTATATATCATAACAACACACACGC
CAATAATGTCACATATGAAAAATGTCGTTCTGTAGGATGGAAGGTGCGGT
CCAACAGACAGTCGCTTCGCTGGGCAGGTCCCAAGACGTCTGGCACAGAT
ATCGCGTCGCCGTGTACGAGGGCAGGCCAGCAGGCGCCATGGCCTTCAAA
TTTCATGGAGACAGGTCAGTTTATAGGACGTATGTTGGAAAGCTAAAAGA
AATACATGTCTTGGCTAGCGGCCTCGTACTATATATAAATCACATATTGC
ACAGGTATACACAATTACACATATCGAAGCATTTTAACCTTGATTGTGGG
CATGTTATAAGTTCTGTGAAGAACCAAAGCTTAGGATGCCGCTCCGTTTC
CTTGGTTTCCTGCATGTTGCTCTGATTCTGGCTGGAATCTAAACCACTAG
AATCTAAATTCCTTTATCTGCTGCAGCGCCATGGGGGATTTCAGCTGCGG
GGAGGCGTGCTCATTTCTTGGATGTGGCACGTGTGGGTATGTATCTTGTT
TGTTTGTTTGTTTGTTTGTTTGTTTGTGTATGAACAGTAAACCATCTTGT
TTTGCAATGCAGGAGTTTTGTACTTGGATTTTTATCGTATACGCCTTGCT
GTTCATGGAATAAGACAACGGCTGAACGATTAAATATGTTCGTATTGCAT
TTCTACATTTAGTGCACGGTGATTCGGACTATGAGATTAGTCCATTGTCA
CAGTTTACTGACGTTAGGGCTCCGTCATATGCATACTTGTGCGTATATTT
AAGTGCATTACCAGTTGCACATTAACATTTTTTTTTGGTTTAAGTAAGGT
TTGCGGGAAAAAGTTGTTTTCTGCTTTGACTCACCGTTGTGCAGCCTATA
GCTAGTGATTGAACCTAAGAAATCACTTATTCGGCTGCAAACTTAACATA
AACCCAAAAACATGTTAATACGCAACCAATGCGGACTTGTATATACGCAC
AGGTGTGACAGGGGCTTTATGGCGGGTTGTTTCCATGATGTCTTTTAAAC
GCTTACAGGCTCATCTGCATGGGCGCTGCCTTGGAAAACGACAACATTCC
TGTGGGGCAGTGTTACCTGGACCACATCGGCGTGGACGCGAGCTTTCGCG
GGAAGGGCATCGGGAAGGTGATGCTGGATAGGGCGGACTATGAGGCCAGG
CAACATGGGTGCACAGTACGTAGGCTGAATAGCCAATAACAGAAACATCT
TTTGAAATAATCTATGCTTGTGTTTAGTGTAACGTCAAATGACAGTCACA
GTAACTGGATAGAATTTGAAAACAGTCAGACGTTTCAGACAGCATCCGCT
GTCTTTCGTCAGTGATTAAAGGGGGGTAACTGGAATAAGCAGGTTTTAAA
CCAAAACTCTATAGATATGTTGATCACGTGAAGACAATTTTAAGTATCAC
GTTGTTTAAGGTTTGTTTTAACATAAAACACTGGGATATTGTACATCTAA
TACAGAAATGTCTACATCCATATTAAAAGATTAATGACAGAAAAATTACC
ATGCTACAAAAGAAAAAGCATACTTTATGCATTTTTGTCTGACACCAAAT
TTTGCTGTTACAGGGTATGTCGGACAACCCGGCACCATGTCAATAGGACT
GTTTCTAGTCATTTTGCAGTCAAGAATACGCCTAACTCTAACCCTAACCT
AATTCTAACTCAGGCCTAACCCTAATCCTTACTCTAACCATAACTCGAGT
CGTCCTGGACCTGGTGCCGAATCGTCCTGATTGGCTATGTGCCGAATAGG
CCGATTCTGACAGTCTATGACAATTAGCAGTTCAACCAATGATAGCATGG
CAAATGGCATTCAACCAATGAGACAGCGGTTGCATGTCGGTCAATATTTG
AATTTTCATGTTTTTAGTTTGCATTTCTACGTTGTGATGAAGGTAAAATA
AATGATAATTTAACGGTTGACAGTGGCAAACGTGCTAGATGTTGCACATC
GGCAACCAAATCTGCAGTGTGTTTTTTGGCACACAGTTTGACAGATTAGC
CGAATAGGCTCGGTGGGCGTCACTCCACCGTCCGGAAAGGTAGTGTAAAG
TGCCTTTCCCAAGGGCACAACGTCGGGGCATGGTGAGTATCGAACTCGGG
ACCTATTGATTCCGAGTTCAACGCTCTAACCGTTACGCCACGCCGACGTC
ACTAGCATTGTGATGAAGGTGGACCGGACTATGAGATCTGTTTATTGACC
TGATACCGTCACATTGTCTCAAAGAAGTTTTAATTGGTATTTCAAACTTA
ATGTGGTTGGTGCTCCTTCTTTTTCTGGAATCCGTGAATGAACGAATGAA
TGAATGAATGAATGAATGAAAACTTTATTATCGTGTCTTGCGACATTTTG
CGCCCAGCCCATGCGGGCTTTTAAGACACCGTATATCTTACATTAAATGC
ATAAAGAAAAGATCAGGAGTACATTGATGTCAAACGTTCTCTTTTCTTAC
AACCACAGGCGATTTTCCTGTGGGTGAAGAAGGGCAACCGTGCTGTTCAC
CTGTACGAACGTCAGGGCTACGTCATCACCCATACGTTCGGCGGCTGGTT
CAAGCGATGTGCGACGGGCTCCAGAGTGAGTCTGATTCTCACTGTAGCGT
AACATCTTCCATCTTCTTACTTCACTCTTACGTGTTGTTTTTCTGTTTGG
GTGACTGGTTGTCTTTGTCTCTCTCTCTATC Coding sequence (CDS) from alignment at Sc0000280:208949..214129- >Blg00027.2 ID=Blg00027.2|Name=Blg00027.2|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000280:208949..214129- (Branchiostoma lanceolatum)
ATGGCGGTTGAACCTGTAGTTGCTCAGCCTGGAATGGCAGAACTGCCCTC
TGAAACAGCACCAGGAACTGAGCCGGGCAGTCCGCTGCAGGTCAGGAACA
TGGAGGCAGAAGACATCGAATTTGTCTCTCGAATGTTGGTGGACGCTTTC
AGTGATAAGTTTGAACACGCGGTTGGCAAGAGTCGGATGGAAGGTGCGGT
CCAACAGACAGTCGCTTCGCTGGGCAGGTCCCAAGACGTCTGGCACAGAT
ATCGCGTCGCCGTGTACGAGGGCAGGCCAGCAGGCGCCATGGCCTTCAAA
TTTCATGGAGACAGCGCCATGGGGGATTTCAGCTGCGGGGAGGCGTGCTC
ATTTCTTGGATGTGGCACGTGTGGGCTCATCTGCATGGGCGCTGCCTTGG
AAAACGACAACATTCCTGTGGGGCAGTGTTACCTGGACCACATCGGCGTG
GACGCGAGCTTTCGCGGGAAGGGCATCGGGAAGGTGATGCTGGATAGGGC
GGACTATGAGGCCAGGCAACATGGGTGCACAGCGATTTTCCTGTGGGTGA
AGAAGGGCAACCGTGCTGTTCACCTGTACGAACGTCAGGGCTACGTCATC
ACCCATACGTTCGGCGGCTGGTTCAAGCGATGTGCGACGGGCTCCAGAGT
GAGTCTGATTCTCACTGTAGCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00027.2-exon-Sc0000280-1570713199:213992..214129 | Blg00027.2-exon-Sc0000280-1570713199:213992..214129 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:212458..212547 | Blg00027.2-exon-Sc0000280-1570713199:212458..212547 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:211822..211948 | Blg00027.2-exon-Sc0000280-1570713199:211822..211948 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:211466..211594 | Blg00027.2-exon-Sc0000280-1570713199:211466..211594 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:211144..211203 | Blg00027.2-exon-Sc0000280-1570713199:211144..211203 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:210465..210621 | Blg00027.2-exon-Sc0000280-1570713199:210465..210621 | Branchiostoma lanceolatum | exon |
| Blg00027.2-exon-Sc0000280-1570713199:208949..209171 | Blg00027.2-exon-Sc0000280-1570713199:208949..209171 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000280 | genome | Sc0000280:208949..214129 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00027 |
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