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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:158344..164588- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00036.0 ID=Blg00036.0|Name=Blg00036.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6245bp|location=Sequence derived from alignment at Sc0000280:158344..164588- (Branchiostoma lanceolatum) ATGGCGCCTCGCGTGCTACACGTGTCCGGAACCAACCGCCAAGTCGGGGT
CCAGGTCGGCAAGGCGACGAAGAGACAGATCCAAGACGCCATGAGCTCCT
ACGAACCATTCAAGGAGATCATTTCCTCCTTAGAGACCAGCGAAGGGAGG
CGGGTGTACGAAGGTTCGAGTGATTTGTTTTGGTGATTTAAAGACGTTGG
TCTCCAAGAAAGATACACATTCTTACGTGTATAGGCATAAATCTGGACCC
TACGTTGCCCTAAAACTGTTCACTCTGTATTATTGTAGGGCAAGGGTTCT
GTACAAACTGTACAAAGGGGGCTACATTGTTGTACATTGTTGAGCAAATA
GGATGACGTTGTCCCGGTAGCCTCCGTTAAACCCGTGTAAGGCGTGTTAC
ACAACATGAAAATACTTCGGCCGACAGACTCTGCGAGCTCTAAATAACAT
TTTCGGCAGTAGTACGACCGGTCTTCTCTCGATCATCGACGGGCCGTTGT
TCACACTATGCCGAGCTCCGTAAAATTTGATACGGTAGATTTTTTTCAGG
CGAAAACTACGCGCGACCCTCTGTAGATTTTAAATTGGGCGACCTCTCCT
GACGATAAACAAATGCGACCTAGCTATATTGAAGCTTATCCGTGTGACAG
GAGCTTTACGACTTCCTACTGTAGGCGATCGTACAAACGCTTCTCATGAG
TGAGTTAGCGGAGTAGAATAAGTAGCTATTTCTTTTCTTTTAAGTCAAGT
CATGTCTTACTCATGGCTTCCATATGGTAGAAAGTAGGGTCATTGACCTC
GCCAGGGCTGTACACAACGTGAGGACTTTGACCTGTTAACGGATGCCAAA
GAAAATGAGTCGAAAAATCGTTACTAACACTTTGACTCTTTTACTGCATT
TAAGTTCGCGGTGATTTAATTTCGCGGTAAGGAAAAAATATTGTGTCCGG
TGGGTTTGAGTTCGCGATAGCACTAAAGTCACACACTGTTACAGTAATGG
AAACACAGGCACCCTTACGGATAGCCAGTCAGAAACCACCTACTAGTGAC
TCGGTAAGGGTGCTACAGACGAACAGAACGGTAACCCTCATCTTTAGCTG
TTAACGAAGCTTCTCTCAACCGGGACGGGAGGCGATATCAACTTCCGACG
GCATTTGACCCATTGCTCACGTCACACGCGCAGATAGTCACGTGTCCACA
GCGATTGCGTAAGACAGCTGAAGAAGACTTAGTGGGTCGGTGAAAATTCC
GATGAGTCCAATTGTTGAGTTGAAGGACTGTCTATCACTACAGAAATGAA
TGCAAAAGACTATTTTTACACAACCAAGAGATTTATTACAAAATTGTTTG
TACGATTGGGACCGCATAGTGATGCCATCCCCTGTGATTGTACATATGTA
AATACTTTGCGTTTGGGATTGCATCACATTATTATGTATAAGCAGCAACA
CCTGTGCTACATTGCTATGTGAACCAGTCAGAATTGCTTTGAAGAATGTG
ATAGATGGTCACTGAAACGTCGGTGGAATAAATCTCTTGGTTGTTTAAAA
AAGAGTCTTTTTTTTATCCAGTAACTTACCAACCTGATGAAACTATTCAC
GGATGTTTATCTCTTAATAAGTTGTAATGAAGATCACTTCCAACGGCCAA
GACAACTCTTGGTCGTCTTCACTATCCACCAAAGATACTCCTCTCTCTAC
AATTCTATAATGTCAAGTTTGAATTAACTCCCTGTTGATTTTCCGCAAAG
GTTTCTTAAAGGCGGCGAAGACTGCGTACCCGAACTATGTGGAGGAGTTG
GAGGGGATGGCAGAGGGAGCCGAGGTGCCGTTCGAACACCTGTTCATCGT
CAACTTCGAGTTCGAACGTGAACTCCTGAACATGAAGAAACAAGATGAAG
AGGAAGGGTTGAAAGGTCTTGGGCCCATTCATAATTCATATTCATTCCTA
TTTTAGACATATTTGCAGCACTACGGTACACAGACTTGGGTGCAGAACTT
TGATTACCAGTCCATGCACCATTCTCCGTGATTCGACTCATTGAGTTACT
TGGCATATCTTAACAATAATCGTTGCATCTATATAGCTAGTGGTACGTTG
TAAGAAACCAGGTGTTCTTGACCGAAATTGTAAAATTCTATTAGTCGGAG
TCACTTAAAACCCATTTAAGGGCTGAAAAATTGTATAAAAGAACAACAAC
AACAAATGACTGACTCAAAAGAAGAGTGCACATTTCAGAAAAGCTCAAAA
CTGTGTGGATCAACTGGCAAATTATCCACCCTATTTGGTCACTGGTCGAT
ATCTACTATTCTTATCCCCATACGTACAGGGGCATGGTATAGATATAATT
GTCCTTTGCAAGCGATATATTTACCTTGTACTTCATTCTAGTAACACATC
CTCCATACATCCAGGTCGGGAAAAGAGGAATAAAATTGAATCTTTACTTC
TCGATAAAAATACATTTGTAAACACAGACGTTTCAAGCGCCCATCCGGCA
TTTTTTTCAATGAGGAGAATGATGTTACGTCGATCTTACGGAAGCATCAT
GATGATATCAAGATGATAAGCGTCTTTATGCTTCCGAAAGTTCAAAGTAA
ACATCTTTCTCCTCATTGAAAAAAAAGCTGCCGGATGGGCGCTTGAAACG
TCCGAGTTTACAAATGTATTTATTCAGTAGTGAAGATTCAATTTTATTCC
TCACATCCTCCTCATTTGTTTCACGTCACTGCAGGTTGCACCACGGTGTT
CCTGAACTACCGTGACGGCCCGAGAGTGTTGGCCCACAACGAGGACGGCC
CGGCCGGCGAGCAGGGCTGCATCGTCGCGGCGCACATCGAACCTTACCGG
CTACCCGGAGGGAAGATTCTACCCGAGGAGAACTTCGTGTCTTACTGTTA
CACATGCCTCCTGCCGGGTGTAGCGTACTCCTTCAACTCTCGCGGCTTGT
GTATCACGTGTAACACGCTAGTGTCAAAGGACGCGGAGGAAAATAAAATC
GGTAAGTATCAATAAAAATTCGATGTACTTACTATCAGATACATGCATAT
GTTTTTGCAAAGACCTTTGTTTCAAAATCTAAGGGAAAGTCTCTATTGCT
AGGTATAACCATTTGAAGACTTTGAAATATCAAGGCTTCAGAAATGGCCT
CATCTTCTCACTAAGAGTATGTTCATATAAAGATACTGGCCTTGTCTTAA
TGCTTTGCGAAAGTCTTTACAACCATGCAAAACAGATAGTGCTAGCAGGG
AATAACTATCTGAAGACAGCTATAAAAGTTTTCCAAAACCTGTAATAGCG
TAAGTACCAACCAGTGTAAAGCGGCCATCTTTGCGATGACAATTGAGGCC
ACTTTTTTGTCGGTTTCCTGGATGTTTCGAATTGACCTTCGTTGTCTCTA
TACTGGTTCCTTTTCTCTTGAGGCTGTAAAAGATGGGGCACTGCATGCAC
AAAACCAGTGTACCTAACGAAAGACCCCATCTTCTATAATAACGAGTCCC
AGCTAAGACGGGTTGTACTACAACTAACTACTTGAAAAGGCATCATGCAT
GCTTTACCTAAACAATTGAGAATGACTGCTCTATCTTTACCCTAACGCCA
AAAATAGTTACTCAAGCAACTGAATAAGATTTTGAAACAGTCAGGCGTTT
CAGACAGCATCCGTTGTCTTTCGTCAGCTAGTGACTAACGGTAAGGATTG
GAAAACCAGATTTATACTAAAACTCTGAATAGATATGTTAATGAGGTTAA
TACAATGTAGGGTGTCTTGACGTAGTCTTCACAAGAAGGTTAATTCAAGA
CAAGGTTTATGCCAGTAGTTCAATTAGCGACTGTTGTTTTAGTACAACAG
TAACTAAATGTTGTTCGTCCGGGGGTGAGGGGTGCTGGGCAATGCATTAT
CCCAAGTGCCTGAAAGTTCAACGCGTAGACCCCCTTTCCAGTTGAGGGTG
GGATTGTGCATCCTCTCATATATTGCTTGTCTAACTCCCCGTTCGAACCA
GCGGGATTCACGATCTAGGATGTCCGTGGATTCGAGATTGAATGAAACGT
CTGACTGTTTCAAAATTTTATCCAGTTACTTGAGTAACTTTTTTTGGCGT
ATCTCACTACCCGGATGTCTAACCTTCATCAACACCTTTACCATTACCTT
AACTAGGTGTATCGTTTGCTTGCCGAGCGGTTCTCTCCGCCACCTCTGTT
GAAGAGGCGGTGGCTATGTTGAAGGGTGACGGTGTCGGCATGGCCATTGG
GTACTCCTTCAACATGGTCAGCACCAGGGACAGCACCCGGAGGATGTATT
CTGTGGAGACCGCCGCGGCAGTGGGACAGGCGACCACTCTGGTGTCCGTG
CACGCTGTGGAGCCAGTGGACGGGAGTACAGAGGGCCATTTCTACCATTA
CAATCTGTAAGCTCACTTATTTTCACAGCCAAATCAATCAATCAATCAAT
CAAATAAATCAAATTTACTTGGGGTTCCAAACATATAAACCAATCATCGT
TACAATGGTACAGTGAGAAATAAAGTGACGTTTGTCTTCTAGTTCTCCCC
TCCTCCCTTCTTCCCTCACTCTTCCTTCCTTCTTTCGTGTCATCTCTTCC
CTCTCTCTAGCTACCTAGCTTATGGTAGAGGAATATAGTCTCTACCAGAC
TAACTGCGCGCAGGCTATAGGGAGAATATTTGCCAGGGAAGTGGCCATCA
TTGGGTTTCATTTGCAGGCGCAGATGTTAACCTTACCGTGGACTGACTTT
CTTAGCAAATTGCCAAATTTTACGATCCCTTTTCCCCGTAGAAAGGCTTT
GTGGAGGCTAAAAGAATAGGTAAAGTTGTTTATTGTGAGTGATATGAAGA
GATAGTTTTGTTTTTTAAATTAGCACTTCATATTGGCACCGTTTGGTCAC
AAAACTTTCTCAGAGAGGCATACCATTTGGTTAGTTTCGTTTCACCACGT
TCTTACCTGATGGCATAATTTGTTTATCTTCCGCAGGTATGAACACCTTT
CCGTCCCCGAGTGGCCGCTGAGCCCCAGTTCCCACCACAGGAAGGCTCGC
GCGTCGGAACTGGTCGCACCTCGGACAAAGGAGGACGTTCTCGCTGTCCT
AGGTAAAGACCCCAATGACCAAACATTGGTTATCATGATCATTGGTCATT
GGGAGCATTGGCCATTCAGATTTAGGGTCATTGAGGTCGGAGACTTTTAG
TCCTTATGCTTTCATGTAGATCATCATCAGATACGATAGGGACCTTGTCA
TTTGATATCTTTTAGAATATTTTTCTAGTTTTATGTATCAATGAAAACAC
CAAACGTTCAGACCCCGTCCTTTTCATCAGGTGACACCGAAGATCCCGAG
TACCCGATTTACCGATCTGGTACAGGGAGGGACAAGGGATACACACTCAA
CACAGGTTACTTATTCATCTGATTGTGCATTTCTATATGTATACGTAATG
AAATTAAATTTAATTTAAGACAAGTGATGTGCAGGCCATATACATGTACA
CCTGACCAATCCTTTCCGTATATTCAATGTAACCTACATTGACTAGTAAA
TATATATATACTACTTGTAGTTCATGCTTGTAGAGAGCCTAGGTAGCATG
TCAATGGTGAAGTAGATTCTACATTTGATCCGAAAATGGAAGTATGAAGG
AATCTACTGTGTTTTGGTCAACGATTCATCAACGCATGGTTTATACTTGT
TCTTTTCTAGTATTAACTGTACGAGGCTGAGTCAGAAAGACATGTCACTA
GTATCATAGCAGTTTCATTTTTGTGTGAAATGACTTGACATTTGACACAA
ATGTAAAGGCACATATCTTCCTGAGAGTGAAGTATCTCGATTCGTTCAGA
TTTTTATTATACACGACAGTAGAGATGAGGCAGCCTGGATCAATTTTATG
CAAATCTATTCATGAGATGCAAATTCATGCCAACCCACTCTCATATATAG
TCTCATTTTGCACTACAAATTTTTTAGAGTAGATTAGTTACCTAGAATCC
TTATTAATAGAAGTAGTCATACGTTGTACTGTTGACTTGCCTTGTACCAC
AGAAGAAAATACTTAGTACGCTTAAAGTATTTTGTTATAATATTAAACAG
TTGTTGTACAGTAAAGTTATTATTCATACCTTTTACTTCTGCAGCGGTGT
TCGAACTACAGAAGGGTGTCATGGAGGTTCACACTGGTAACCCTAAGGCC
GACGAGAAGCTCGGGCCGGCACTTCAGTTCATCTTACCCGCTTAA Coding sequence (CDS) from alignment at Sc0000280:158344..164588- >Blg00036.0 ID=Blg00036.0|Name=Blg00036.0|organism=Branchiostoma lanceolatum|type=CDS|length=1137bp|location=Sequence derived from alignment at Sc0000280:158344..164588- (Branchiostoma lanceolatum) ATGGCGCCTCGCGTGCTACACGTGTCCGGAACCAACCGCCAAGTCGGGGT CCAGGTCGGCAAGGCGACGAAGAGACAGATCCAAGACGCCATGAGCTCCT ACGAACCATTCAAGGAGATCATTTCCTCCTTAGAGACCAGCGAAGGGAGG CGGGTGTACGAAGGTTTCTTAAAGGCGGCGAAGACTGCGTACCCGAACTA TGTGGAGGAGTTGGAGGGGATGGCAGAGGGAGCCGAGGTGCCGTTCGAAC ACCTGTTCATCGTCAACTTCGAGTTCGAACGTGAACTCCTGAACATGAAG AAACAAGATGAAGAGGAAGGGTTGAAAGGTTGCACCACGGTGTTCCTGAA CTACCGTGACGGCCCGAGAGTGTTGGCCCACAACGAGGACGGCCCGGCCG GCGAGCAGGGCTGCATCGTCGCGGCGCACATCGAACCTTACCGGCTACCC GGAGGGAAGATTCTACCCGAGGAGAACTTCGTGTCTTACTGTTACACATG CCTCCTGCCGGGTGTAGCGTACTCCTTCAACTCTCGCGGCTTGTGTATCA CGTGTAACACGCTAGTGTCAAAGGACGCGGAGGAAAATAAAATCGGTGTA TCGTTTGCTTGCCGAGCGGTTCTCTCCGCCACCTCTGTTGAAGAGGCGGT GGCTATGTTGAAGGGTGACGGTGTCGGCATGGCCATTGGGTACTCCTTCA ACATGGTCAGCACCAGGGACAGCACCCGGAGGATGTATTCTGTGGAGACC GCCGCGGCAGTGGGACAGGCGACCACTCTGGTGTCCGTGCACGCTGTGGA GCCAGTGGACGGGAGTACAGAGGGCCATTTCTACCATTACAATCTGTATG AACACCTTTCCGTCCCCGAGTGGCCGCTGAGCCCCAGTTCCCACCACAGG AAGGCTCGCGCGTCGGAACTGGTCGCACCTCGGACAAAGGAGGACGTTCT CGCTGTCCTAGGTGACACCGAAGATCCCGAGTACCCGATTTACCGATCTG GTACAGGGAGGGACAAGGGATACACACTCAACACAGCGGTGTTCGAACTA CAGAAGGGTGTCATGGAGGTTCACACTGGTAACCCTAAGGCCGACGAGAA GCTCGGGCCGGCACTTCAGTTCATCTTACCCGCTTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00036.0-exon-Sc0000280-1570713199:164426..164588 | Blg00036.0-exon-Sc0000280-1570713199:164426..164588 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:162674..162838 | Blg00036.0-exon-Sc0000280-1570713199:162674..162838 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:161588..161854 | Blg00036.0-exon-Sc0000280-1570713199:161588..161854 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:160183..160432 | Blg00036.0-exon-Sc0000280-1570713199:160183..160432 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:159487..159602 | Blg00036.0-exon-Sc0000280-1570713199:159487..159602 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:159184..159258 | Blg00036.0-exon-Sc0000280-1570713199:159184..159258 | Branchiostoma lanceolatum | exon |
Blg00036.0-exon-Sc0000280-1570713199:158344..158444 | Blg00036.0-exon-Sc0000280-1570713199:158344..158444 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:158344..164588 - |
Properties
Property Name | Value |
GeneID | Blg00036 |
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