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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000280:97202..102655+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00018.0 ID=Blg00018.0|Name=Blg00018.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5454bp|location=Sequence derived from alignment at Sc0000280:97202..102655+ (Branchiostoma lanceolatum) ATGAATTTAAGCGCAGCTTCCAGTGACACGCGAACGTCGGTCGAGTTCCG
AAAAATTGCCCGAAGCCCGCGTAATCGACAGGACGTCGGTCGTACTTCGG
CCGAAAACACCCATTTGGAGCTCGCCGACACGTAGGCCGAGCTGAATTTT
TGACTTGTAACGGGGGCTTTATTAAAAGGCATACCAACCTTACTGTTATT
AACTGTACATAGATTAATTTACAAAGCCTCAAAATGACATCTCCTCTCTG
AAACAGTGCTGGACGCAGGTGGAAAACCCCCAAGTGGAATTTTCGATGGA
AACCTGGTCTGGGCTGGTAGCTACTCGCAATGTGTGAATATCACGAGCAA
AGGCTTCAACATCACATTCGATGGGAAGTTTTACCTGGCTACGCTGGTAC
CATTGGCCAGGGCCCAACAATCTGAACAGATAACACGAGTGAGTAGAAGT
CACAATAGATAAAAAAATAATACTAAAAGAAAGTAACAAACGAACAAACA
AACAAACAGAATGAATGAATGCCTTCCCATATAGATTGCTTACAACGATG
CTAGCTCATGAGTCATGCCACTGTTTCTACAGAGCTTAGGTGGAATACTC
AATGTGACGAGTATACAGATTGGCATCTGCGTCCCCAACTCCTGCAGTCA
ACATGACGTCATTCAAAGATTGGACGGCAGTAAGTCTGGCATCAAATTTC
GTACATACATGACTTTGAATTTGAACAGCTGTCGACAGTATGTATCGGAA
TTGTGCCAATTAGTTTAATTAGTAATTCTCAGCAATTATCTAGATAATTC
TGGCGACTAACGCATATGATTCTGGTAAGGTATTTTATATGCTAGACTGA
ATTTAGTTTTATTCGTTGTTATGGCTTCTCGGCTTGTTACCTTCTGAACG
CCGACAAATTTCTTTATCGTATTAGGTATCTACTGGCGTTTCCTTGTCCA
ACAGGGCATATTACAAGTGACGTCAGCCTATTCACAGGAATCCGCACCAG
TCCAAAATGTCACAATTGCTGCAATGTGAGCATATTTAATCCTTTGTTTT
TGTTACTAAAGCTATGTTGATTTGATTACTAGTATATAGGTTACATCCTT
TGGGAGCACCAAAATTGATGGGGGCGTGCAAATAAACTTGGGCTAATTTT
TGGTTGGTTAGAAGACATTGAACTCTTTCTCTTTTCCTACTTGCACTGAT
ATGTTTGTCCCCTTTGTTCTTTCTACAGATGTCTCTGCAGTCTCATCCTC
ATCCTCCTTGCGATTTGCACTATCTATGACGTCATCATCCACCAACCCCG
ACTGATGGCTAATGAAATTCAGAAGGTAAGAAGACATCTCAGGATCATCA
AATTGAAAGTTTAAGCTAAATGACGTCTTCGAAATTACACCTAATTGAGC
AACGCCATATGACCGTAAGTAGATAAATGTTAGCATACATCTGTAGTATA
AAACAGTTACAAATCATTGTTATGTGATGTTACAACTGAAGGGTGGCTGA
GGAGTTTTGGGTCGTTATTGAAAAAAAAACCTTCCTCAAGCTTAATTTTT
TTCAGTTAGTACCCTTTTTAGGTAATTATTTATGCAAATTGGTATGACGT
AATGATTTCGTCATTAAGAGTTATAAGGCCACGCCCATTTTTAGAAAAAA
GGCTCTCCTTGGCTTGTACTTCGATGTTTATCAAGATCAGTTTACAGGAA
TGTACATGATAGTTATACATCAAGGATTATGCGTGCCTGTGTTAATATTT
TGAAATAACGATTTTTGGCGAATTTCTATTGTAATTTTTGATCCTTGTTT
GTACGTTGTGCTGTGATGATCTGGGTAAATCATGTTGGGTCCATTTCATG
CCAGCAGTAGAAATTTGAGCATTATGAAATAGCCTAATGTATTAAGTAGA
TGACCATCGCATAATATCCGTAAGGCGTCTCCGACTGTGATGTTTGTTGA
CATAATTTTGTAGGGCGGTGAAGTACAAGGACCTGACTGCACCGTGACTT
TACCCGAGGAATTGACGCCGCTGGCGAACACACTCCCTTGCGAGGAAACT
TCAGCAGCAAAAGAAGGTCAGAACTAACTTCAATGATACTGTTAAAAGAA
TGCAGTATCAGATGTAGGAGGTTATATTATTTTGATGGTTCTATATTCCA
TAGGTATCACCGGCCGTATCCTCCTGTGTTTCTCCCTCTACACCAACGTC
GGGAAGCTCCTGAGCACCAAGCAGGCGCCCGGCAGCATCAAGTGTCTGCA
CGGTATCCGCTTCATCAGCATGACCTGGGTCATCCTGGGACATACTTACA
TTGATGCTCAATCACACTTCGGGCAATTAGGTATGTGCACTGTGCTCTAA
TCCGAAGCTCGACAATCATCCGACCAACAACTTAACTACAAAGCAAAGGC
CGGGTTTAAGCTTTGAGCAATTGCGCAAGTAAAACACTGGTCATTAGTGC
ACTGATGGAACGTTCATAGAATCTGGTCCAGGGCGAATCTTGTTGTCACC
ACATGATTTGATTTGATGTTGAAATTACCACACAGACCATCGATCTGGAA
TCTATGTTAATTTGATTTTTCAGACAACCCTGCGCTAGCTCTTGAGGCCG
TTCAAACATTTACAATTCAAGCCATCAACAATAGCTACGTTTCCGTGGAC
TCCTTCTTCTTCCTAAGGTAAGACAACGGTTCTTCGGAACATACATGTTA
TACTGGTAGAACGTAACTACGTTACATGTACAACTTTATATCTAATTATC
ATCTCCAAGAAAAATGGAGATATAGTTTTGGGTGTGTCTGTGTGTGTCTG
TGTGTTTGGGTTTCCGCACTACTGTAGTCAGCATAACTCAAGAACCTCTA
TAATGGATTACGATGATATTTGGTATGTGGGCTGGTGTGGTGAGACCGAC
ATTCAAGGTCGATTTTGCCACCTATTGTGTGACCTTGGTACTTCCATTTT
TGTATCTTTTGACCTGGACGTGCTATGGTCTTGATTTTTTTGTGGCAGAT
ATCTTGTGATGTAATAAAAAAAGTGGTGTAGGTTTGGGCCCCCTAGCAGC
TTGCTCTGGAACTGCAGGTGCGTTATTGTGAAAATCTTCTAAGGAGAATA
ACTGAACAATTGATATCTAGTATGCAGGTAGCTTAGACAGAGATGTACAT
AATGAAGTGCAAATTATGCTAATTGGAATTTAATTTGCATATTTGATTAG
CTTAATCTATATTTGCAATGATTTCCATAATATGACTAAAAAAATGTAAC
ATATTTACTTTTGTACTTTGCAATTAGCCATTCAACCTTGCTGTTTAAGC
GGAGTTCTTTGAATCAATAGCCCAACCATTTTTTTCTAATCTTCCCTTCC
AGCGGACTCCTGATGTCATACCTTCTAATCAAGCAGATAGAGAAGAAGGG
AGAAAAGGGAGAATCCGTCTCATACGGGATGGTGTATTTCCACAGGTATT
GGAGGTGAGAATATTTCAAAGCTATTTTGAAGCATATACCATCAGATCAA
TACATGCTATTAGAGATATTCCAGAAAACCACGTCTTCAAAACCAACGAC
TTTGAATTCGAGACATTTTCGACAATCATCTTCTTTCTCAAAGACAAGTA
TCGCAGATTTCACCGAACTGATTTTATTTCTTGTTAAGCCAAACTGACTT
GATTATATGGATGACATCCTCGTTTTTTCTACCATACTGTAGATCGCGGG
AAGCTGCAAAATGAACAAATATATGCTGTTAATTGCAAACAAATATCAGA
AAATGGATCCTAATGTCGTGGAATGCCTCTTTCCTTATCGTAAAATGTAC
TGATTCTGTCGTAAACGAATTTCTTGCACATTTTATGTTTGATGCAAGTG
AAGGTTTCCACACTATAACGTGTAAGGGATTTGAATCGCTTGTATATTAT
CCATTGTCTTCATCCTGCGTGCTGCCTATCGCTAGAACCACAGTGCAAAG
AACCAAAAGGCTTATGCCGAGTTGATTAAAGATATGATTATTGGTTGAGC
CTCCGTGAAATGTTAAGTATATGTATGGCCTCTTTGTATGTTTTGGTGCA
AGCATTTTGCCATTTCTATCAATACAAATCAGCTGAAAAATGTTTTTCGA
CCCCTGAGCGAGGTCTTCCAAAGTCCAAGAAGAAAATATGAAGGAACAAA
AACCATGTTCTGTGAGTTCAGTCAATTGTTGAACATTTCTGACGACTTTT
TTGACCCATGTATTTTTCGCTCATGCTCGCATCAGTTTTGTGGTGACGAG
GGGATATCATTCATATAATCGCATCAGTTTAGCCTTACTTTAAATCATAC
AGCCAGGAGGTTTCTACCAACTTCATCAAAGGAAGCTGGGCTAAGAACAT
ACACTGCTGTCAGTAGACAACGAATAGAAACAGCATATCGTGAAAACGTC
TTAGTGCACGTAAACAATTGCCTTCATTCTGCCATCCTCAGGTTGACACC
TACTTACATGTTTGTCATGATGCTGTACATGTGGGTGCTTCCCTACATGT
TCTCTGGCCCCTTCTGGCCACCAGCTCCTTTGGATCCAAACTGTGTGGAC
AACTGGTGGACAAACCTACTGTATATCAACAACGTTGTCCACGAAGATAA
GATTGTAAGCACATTTCTGTTAGCTTGTATGAGAGACAAGACAAGGGGTG
GAAAACAGTGCCATGTTGACAATTATTCACAACACCTGCTGATCATACAC
ACAACATCCGTTTCAGTATACGGAGGGGGGCATTCAACTGCACAAAGCAC
GCTTGCAGCATATGAAAAGATATTTAGTTTTCCTTTTCCGATGCGGTTCT
GTGGAATTCACTGCCACCACATGCAAGAGATGCAAAATCTATCGGTACTT
TTAAGATTTTATATACAAAGGAACTCCAGAGATTTTTAATTTCTGTTATC
CCTTATATATGTATTTTTTTTCTTCACATATCTATTATAATGTCTGCCAC
TCTTCACTTTAGTGTATGCTCTGGACCTGGTACTTGGCCAATGATATGCA
GTTCTTCGTCATCGGAGTTCCACTCGTCTACATACTGTACAGGTACTTCG
CATGATTTTACATTATCTATAAACCAATAGCGAAATGTTGCCGTTCGTAA
AGACATTGTCTAAATCACCTGAATACAATTTTTCAGTTACTATCCATTCA
TCATCATGAAGCAATGCAACATGTTGGTAATCTATAGTCTTTTTACAAAC
TGAAAATAAGCTTGATGTCATTTTGAATCCAATGGGATTCCATCAGATCA
GAAAGACATTGAGCTATGCAAAGAAAGAACGATGTCTTAACTTTTTACTG
AGCTTGCCTTTACCATTCGCTGATGATGATTCATCTGCTTACTGACAGGT
GGCAGATATGGGGGATTGCTGTGAAGCTGGCTCTTCTGTTGGCAAGCTTC
ATCACCACTGCAGTGATCAGCTGGCACTATGGTCTGAAAGCACCAGATGG
GTAA Coding sequence (CDS) from alignment at Sc0000280:97202..102655+ >Blg00018.0 ID=Blg00018.0|Name=Blg00018.0|organism=Branchiostoma lanceolatum|type=CDS|length=810bp|location=Sequence derived from alignment at Sc0000280:97202..102655+ (Branchiostoma lanceolatum) ATGAATTTAAGCGCAGCTTCCAGTGACACGCGAACGTCGGTCGAGTTCCG AAAAATTGCCCGAAGCCCGCGTAATCGACAGGACGTCGGTCGTACTTCGG CCGAAAACACCCATTTGGAGCTCGCCGACACATGTCTCTGCAGTCTCATC CTCATCCTCCTTGCGATTTGCACTATCTATGACGTCATCATCCACCAACC CCGACTGATGGCTAATGAAATTCAGAAGGGCGGTGAAGTACAAGGACCTG ACTGCACCGTGACTTTACCCGAGGAATTGACGCCGCTGGCGAACACACTC CCTTGCGAGGAAACTTCAGCAGCAAAAGAAGGTATCACCGGCCGTATCCT CCTGTGTTTCTCCCTCTACACCAACGTCGGGAAGCTCCTGAGCACCAAGC AGGCGCCCGGCAGCATCAAGTGTCTGCACGGTATCCGCTTCATCAGCATG ACCTGGGTCATCCTGGGACATACTTACATTGATGCTCAATCACACTTCGG GCAATTAGACAACCCTGCGCTAGCTCTTGAGGCCGTTCAAACATTTACAA TTCAAGCCATCAACAATAGCTACGTTTCCGTGGACTCCTTCTTCTTCCTA AGCGGACTCCTGATGTCATACCTTCTAATCAAGCAGATAGAGAAGAAGGG AGAAAAGGGAGAATCCGTCTCATACGGGATGGTGTATTTCCACAGGTATT GGAGGTGGCAGATATGGGGGATTGCTGTGAAGCTGGCTCTTCTGTTGGCA AGCTTCATCACCACTGCAGTGATCAGCTGGCACTATGGTCTGAAAGCACC AGATGGGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00018.0-exon-Sc0000280-1570713199:97202..97332 | Blg00018.0-exon-Sc0000280-1570713199:97202..97332 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:98430..98526 | Blg00018.0-exon-Sc0000280-1570713199:98430..98526 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:99165..99267 | Blg00018.0-exon-Sc0000280-1570713199:99165..99267 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:99355..99531 | Blg00018.0-exon-Sc0000280-1570713199:99355..99531 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:99775..99868 | Blg00018.0-exon-Sc0000280-1570713199:99775..99868 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:100554..100655 | Blg00018.0-exon-Sc0000280-1570713199:100554..100655 | Branchiostoma lanceolatum | exon |
Blg00018.0-exon-Sc0000280-1570713199:102550..102655 | Blg00018.0-exon-Sc0000280-1570713199:102550..102655 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000280 | genome | Sc0000280:97202..102655 + |
Properties
Property Name | Value |
GeneID | Blg00018 |
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