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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058072 ID=TCONS_00058072|Name=TCONS_00058072|organism=Clytia hemisphaerica|type=transcript|length=1183bp
CATGACTTCTTTTATTAGGATCCTTTGGGGTGCAAGTAAAAGGTTTCCTT
TTACTCGTtcgtttttaagatttttaagaCCACAATTTTCATGATTCGTT
AATTTACATTTGATTACTctctttttttagaatttagaaataatttctca
ataacaaaataatgaacatttttaatgaaaaatgctcaaaaagaaaatga
ataaaagaagaagaagaaaaagaaaagtaaagaccTGGGAAGACTTCATA
ATGGGATCAACTGAGTTTTGACAGTGATGATTTCTTTGATGGATTAATAA
CGTGATGGTTTAAAATGGACCCCAAAAGAGGAACTACTTTCATTGATATC
AAGTAAGTACTTTTAATCTCCTTTTATTTTGACTATAGtttgttttttca
tatttttcttcatttaaataTATAGTTTGATTTGCTATGGAGGAGTGATG
TTATTTCACTGTGTTCCTGGAACTGATGGTAATATTTCCAAGGCCGTATT
TCCAAGGCTACGACACACAGATTACGGCAATAAAGCatttctttaaagat
atttttatctttACCGATTTTGAAGTTTGCCTTGTATTACaattattcag
tcacaactaaCCATCAAGTTTATCCTAATGACTGAATTAAACTAGCTTAG
CTGCCTAGCCTACATAAAGCGAATAGATTCGAGAAATGTCAAAATATGTA
GATAATGGTTTTAGCTGGTTTTAGCTCCATAAACACGAAATGATGCTCTT
TGGTCGGTGTAAGTTTACTTCAAATCATCCGAGATTATAATGCCACCAAA
CATTTGCTAGGTTCTGGAAttcatttaattattttactGTTGTTTAGAGA
TCTCAAAATGTATTCAGAAATTTAATGCTTGGGTCAATACCTAGCTTTCT
TCCCCTTGGGTCATGAATAATCGAATGATTAGAATTAAGACCACTCCCTC
AACAAACAGTACGTCTAAAAAAGTTTAACCCAGATGGTTTGTTTTCATGA
ATAGTGTTTCAGCGATGGTTTGCACATAAAAACATCTCGTAACTTAAGAT
ATTTTATCGAAGTTCGTAACCACTTTCTGAAATTCTTTTATTCATCATGG
AGGAATAAATCAAAAGTCTGACTTTAAGGATATTTTCTTGGACCAATGAT
TGaacgatgaaaagaaaaactagaattcttttc Run BLAST on NCBI transcript from alignment at scaffold_305:22164..23346+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058072 ID=TCONS_00058072|Name=TCONS_00058072|organism=Clytia hemisphaerica|type=transcript|length=1183bp|location=Sequence derived from alignment at scaffold_305:22164..23346+ (Clytia hemisphaerica)
CATGACTTCTTTTATTAGGATCCTTTGGGGTGCAAGTAAAAGGTTTCCTT
TTACTCGTtcgtttttaagatttttaagaCCACAATTTTCATGATTCGTT
AATTTACATTTGATTACTctctttttttagaatttagaaataatttctca
ataacaaaataatgaacatttttaatgaaaaatgctcaaaaagaaaatga
ataaaagaagaagaagaaaaagaaaagtaaagaccTGGGAAGACTTCATA
ATGGGATCAACTGAGTTTTGACAGTGATGATTTCTTTGATGGATTAATAA
CGTGATGGTTTAAAATGGACCCCAAAAGAGGAACTACTTTCATTGATATC
AAGTAAGTACTTTTAATCTCCTTTTATTTTGACTATAGtttgttttttca
tatttttcttcatttaaataTATAGTTTGATTTGCTATGGAGGAGTGATG
TTATTTCACTGTGTTCCTGGAACTGATGGTAATATTTCCAAGGCCGTATT
TCCAAGGCTACGACACACAGATTACGGCAATAAAGCatttctttaaagat
atttttatctttACCGATTTTGAAGTTTGCCTTGTATTACaattattcag
tcacaactaaCCATCAAGTTTATCCTAATGACTGAATTAAACTAGCTTAG
CTGCCTAGCCTACATAAAGCGAATAGATTCGAGAAATGTCAAAATATGTA
GATAATGGTTTTAGCTGGTTTTAGCTCCATAAACACGAAATGATGCTCTT
TGGTCGGTGTAAGTTTACTTCAAATCATCCGAGATTATAATGCCACCAAA
CATTTGCTAGGTTCTGGAAttcatttaattattttactGTTGTTTAGAGA
TCTCAAAATGTATTCAGAAATTTAATGCTTGGGTCAATACCTAGCTTTCT
TCCCCTTGGGTCATGAATAATCGAATGATTAGAATTAAGACCACTCCCTC
AACAAACAGTACGTCTAAAAAAGTTTAACCCAGATGGTTTGTTTTCATGA
ATAGTGTTTCAGCGATGGTTTGCACATAAAAACATCTCGTAACTTAAGAT
ATTTTATCGAAGTTCGTAACCACTTTCTGAAATTCTTTTATTCATCATGG
AGGAATAAATCAAAAGTCTGACTTTAAGGATATTTTCTTGGACCAATGAT
TGaacgatgaaaagaaaaactagaattcttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058072-exon-scaffold_305-1491911889:22164..23346 | TCONS_00058072-exon-scaffold_305-1491911889:22164..23346 | Clytia hemisphaerica | exon |
| TCONS_00058072-exon-scaffold_305-1510915933:22164..23346 | TCONS_00058072-exon-scaffold_305-1510915933:22164..23346 | Clytia hemisphaerica | exon |
| TCONS_00058072-exon-scaffold_305-1575043694:22164..23346 | TCONS_00058072-exon-scaffold_305-1575043694:22164..23346 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_305 | supercontig | scaffold_305:22164..23346 + |
Blast
The following BLAST results are available for this feature:
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