|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057533 ID=TCONS_00057533|Name=TCONS_00057533|organism=Clytia hemisphaerica|type=transcript|length=955bp
CAATTCTATTACTATACTATAGTACAGTAGCCAGAGGACTCACGCTAGGG
GGATAGCGGAAGATACGTTGAGAGTTCCTTTAAGATAAATATTTACTCGA
AAGCACCTTCACAAAATCAAAGGTATAATATATTCCAAGAATAAGAAcca
atttatatttattttagaatattaaaaattagtaaattgATCTTAGTACT
ATTTACAAAAAGGAACTTgaaaaatgatacaaaatggaACAAATTCAAtt
ctgttaaaaaaataaagtttttaaattttaatgttGAAAACATCAGTACA
GTTTCTACTGTACATAGCTTCTTGTGTTTAATATCATTAGTCAGTCacgg
aaatccttgcatttgcacggggtgtGCATTTGCAATGGTTTCAACGATTT
TTCCCGACCCTGTGCAAATGATAGCACTCGAGAATGTAAAATAAAAGAGT
GGTACAAAtgactagttttaccaagcagcctcaatgtttcttaagaaatc
ggtattttgagccttaaatatttcttacattatttttcaagcaaagaaga
TAAGCATTTATTTtaattggaaggttcttaaaaaagaaTACGCATTGAAA
AATGTTATTTCTCATTCTAAGCTCTAGCATctagcatgtttcttagtttt
taggaattctgagcctcatgtttcttaaaagtgtgtttctttaaaaaaaa
tttgtaactCGAATAATTCCTTAACTCGAAGAAGTTTTAAGTTCCCTTCA
GTTAACTCTGCCAAATAAACCTTaatccttaactcgaacaaatttgcgtt
ccccATGCGTGTTCGCGTTTTGAGGACTCCACTGTATTTAAAATATTGTA
AATCTAAacgaaaacttgaaaaaatacaAACGAAATCAATAAAAAAGCCT
TTCTTGAATTTCCGCATATAATGTTCTTCCTCTGAAATTCATCCACTAAT
AGCAC Run BLAST on NCBI transcript from alignment at scaffold_291:70403..71357 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057533 ID=TCONS_00057533|Name=TCONS_00057533|organism=Clytia hemisphaerica|type=transcript|length=955bp|location=Sequence derived from alignment at scaffold_291:70403..71357 (Clytia hemisphaerica)
GTGCTATTAGTGGATGAATTTCAGAGGAAGAACATTATATGCGGAAATTC
AAGAAAGGCTTTTTTATTGATTTCGTTtgtattttttcaagttttcgtTT
AGATTTACAATATTTTAAATACAGTGGAGTCCTCAAAACGCGAACACGCA
TggggaacgcaaatttgttcgagttaaggattAAGGTTTATTTGGCAGAG
TTAACTGAAGGGAACTTAAAACTTCTTCGAGTTAAGGAATTATTCGagtt
acaaattttttttaaagaaacacacttttaagaaacatgaggctcagaat
tcctaaaaactaagaaacatgctagATGCTAGAGCTTAGAATGAGAAATA
ACATTTTTCAATGCGTAttcttttttaagaaccttccaattaAAATAAAT
GCTTAtcttctttgcttgaaaaataatgtaagaaatatttaaggctcaaa
ataccgatttcttaagaaacattgaggctgcttggtaaaactagtcaTTT
GTACCACTCTTTTATTTTACATTCTCGAGTGCTATCATTTGCACAGGGTC
GGGAAAAATCGTTGAAACCATTGCAAATGCacaccccgtgcaaatgcaag
gatttccgtGACTGACTAATGATATTAAACACAAGAAGCTATGTACAGTA
GAAACTGTACTGATGTTTTCaacattaaaatttaaaaactttattttttt
aacagaaTTGAATTTGTtccattttgtatcatttttcAAGTTCCTTTTTG
TAAATAGTACTAAGATcaatttactaatttttaatattctaaaataaata
taaattggTTCTTATTCTTGGAATATATTATACCTTTGATTTTGTGAAGG
TGCTTTCGAGTAAATATTTATCTTAAAGGAACTCTCAACGTATCTTCCGC
TATCCCCCTAGCGTGAGTCCTCTGGCTACTGTACTATAGTATAGTAATAG
AATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057533-exon-scaffold_291-1491911889:70403..71357 | TCONS_00057533-exon-scaffold_291-1491911889:70403..71357 | Clytia hemisphaerica | exon |
| TCONS_00057533-exon-scaffold_291-1510915933:70403..71357 | TCONS_00057533-exon-scaffold_291-1510915933:70403..71357 | Clytia hemisphaerica | exon |
| TCONS_00057533-exon-scaffold_291-1575043694:70403..71357 | TCONS_00057533-exon-scaffold_291-1575043694:70403..71357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_291 | supercontig | scaffold_291:70403..71357 . |
Blast
The following BLAST results are available for this feature:
|
