TCONS_00057365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057365
Unique NameTCONS_00057365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2426

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057365 ID=TCONS_00057365|Name=TCONS_00057365|organism=Clytia hemisphaerica|type=transcript|length=2426bp
TCATGAAATGGATGTTTTACGCACAAAAATTTGCTTCAAAACAAGACAGT
GATACGCGCGTATTTGACATGACAGTATTTGCTCTCTGATTTACGATAAT
TCTCTTCAAACGATGTGCAACTTCTTCTCTCTATTTGTTCTTTGTATAAC
GTCTCTCCTCAATCTATTTCTTCGCGCGATCGTATCTTCTGCGCATGCGT
GGAACGTATCACGATGCAACACTCATAATATGTTTTGACTAGGCGGATTG
CGCTATTAATGAcacttatgtttttttctttattgcaGCCGGGAGTAAAG
AATTTCAAGAGAgatatttttgtataaaaagcaACACTTGACAAGAGGAG
ACTTTGTTTTTGGGATTTTTATCAAAGAGAGACTGATACACGCGGTCAGA
CGAGGGCTACAGACAAAAAGACattatgtatactttattggtAGCAGGAA
TATTTTTAACGACTTTAACAACGGCTTATGAAGCCAATCGTAAATGTGAA
CCCAACAGGGCGGCGCTTTGCAAAAACTTATACAACTCGACACGGTTTCC
GAATTTCGTGAAACATCGGTCACAGGTAGATGCAATTATCGAATTAAACC
AGTATAAACAACTCATTGATATCGAGTGTGCGCCTCATTTGAGATTGTTT
TTATGTTCAGTTTTGATGCCAATGTGTACTATgcttgaagaaaatatttt
accatGTAGATCGCTCTGTGAAGAGTCAAAAGCTGGTTGCGAAACAGTTT
TATTGAACTTTGTGGGCTTACCGTGGCCTGATAGGTTGAAATGCGATCAG
TTTCCTGTCAGTGGTAGCGGACAAGTTTGCGTGGAGAACAAGAATGCTCA
GCCTAACAAAAAAACGTGGGtggACCCCAACAAGCGAAGTAAAATGACTG
AAAAAGAGAAAGCCATTCTTATTTGTAGTAAAGGCCAAAAGATTCGGTTC
CGTAAGATAGTccacgaaaataaaaattgcaaGCGTCACATCTCTCAAGA
AGCGATACGTAAGAAATGTGATGGGGAACATACTTGTGAGTTCACGCTCA
AAGACCTCACCAATGAAAGAGGACAAGGGAAAGGTTGCAGACCCGGTAAA
ATTGGTTCAGCGAGCATCAAGTACCAATGTTATAAAGACAAACCGCCAAA
GCAGATCCATTTGAAATATCGCCAAGATGCATTCCTTCTCTGCAAAAGCG
CTAATCGAAGAATCAATATCTTGAAAGTTCAGTACCGCGACGAGAAAGCG
GCCGACACCTGCATCACACCGAACGCCTTCTGTAGCGTAACACAATCNCG
ACGAGAAAGCGGCTGACACCTGCATCACACCGAACGCCTTCTGTAGCGTA
ACACAATCATGTACTGGAAAACAGAATTGCGCTTTGTATTCCGATAACTC
ATTTATACCCAGTCCCTGTAAAAATCTAAAACCGAAACTCATTGTTGATT
ATGAATGTGAAAAAACATTACCTGATGAAAAAGTTGTTCAAGACTTTTGG
GAAAACATCGAGTTAAAATGTCCTGCGGGTAAACTGTTGAACATTGTGCG
GGCTGAGTACATTGGATCGTTATGCAGTAGTAAGAACATTCACTGTGCTG
TCAATTTATATTGTAAGAAGAAACAAAACTGTATTCTTAAAAATTCTGAT
CAGCGAGCTGTCCAATGTAAAGACGAGCGGAGTAAAGTTAGTATCCGCTA
CGCGTGTACTTGAAGAAAAGCCGTGTTTTCAGGTGATGATAGAAATAGAG
TGTTTTTGCGAAGCCCTTTCCGCtttaatgaaaaattctctTTGGAAAGT
CGCGAAAACGTATTAAAATTTGGGATTAATGCAACAATGAATGACTCAAT
GATGGTGATGATGACTCAATGATGGTCAGGTTGGTTTGACGTCGCATTGA
TGGAAAAGTGATATTTCTTTCCAAAAGACTTTCTGTTGCAAGATGGATAC
AGAATTTGATGTTATTGTTTCAGTGAATTTTATCTTGATAAAcgataatt
ttacgataatttctAGATTTTATAAATATCTCTAGATATATAGCAGACTG
AAGCAAATTTTCCGTCAATTCCTAATAGATTCGAGACTGTTAGCAGGTCT
Gtctttagtctgaatcgcagacctctacaaaaccccaggtagtataagga
gcacgaatccgttagtggatgccagcagcctagtcTGTCTTAGAAAAGGG
GCGcatttttaagacaaaaatgttttgcttttttcacattttgattTACT
TGATGAAGAAAGACCCAGGgacgattttttttatttttttaataaaatat
ccaaatgacattttttgtttaaaattgtaaatttttaagaattaattaat
tttttttattttcatacattttgtttttttttcttcggaatgtaaaaaga
tagTAAAGTTAGTGACGTAGTTAAAA
Run BLAST on NCBI

transcript from alignment at scaffold_288:400884..408606-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057365 ID=TCONS_00057365|Name=TCONS_00057365|organism=Clytia hemisphaerica|type=transcript|length=7723bp|location=Sequence derived from alignment at scaffold_288:400884..408606- (Clytia hemisphaerica)
TCATGAAATGGATGTTTTACGCACAAAAATTTGCTTCAAAACAAGACAGT
GATACGCGCGTATTTGACATGACAGTATTTGCTCTCTGATTTACGATAAT
TCTCTTCAAACGATGTGCAACTTCTTCTCTCTATTTGTTCTTTGTATAAC
GTCTCTCCTCAATCTATTTCTTCGCGCGATCGTATCTTCTGCGCATGCGT
GGAACGTATCACGATGCAACACTCATAATATGTTTTGACTAGGCGGATTG
CGCTATTAATGACACTTATGTTTTTTTCTTTATTGCAGCCGGGAGTAAAG
AATTTCAAGAGAGATATTTTTGTATAAAAAGCAACACTTGACAAGAGGAG
ACTTTGTTTTTGGGATTTTTATCAAAGAGAGACTGATACACGCGGTCAGA
CGAGGGCTACAGACAAAAAGACATTATGTATACTTTATTGGTAGCAGGAA
TATTTTTAACGACTTTAACAACGGCTTATGAAGCCAATCGTAAATGTGAA
CCCAACAGGGCGGCGCTTTGCAAAAACTTATACAACTCGACACGGTTTCC
GAATTTCGTGAAACATCGGTCACAGGTAGATGCAATTATCGAATTAAACC
AGTATAAACAACTCATTGATATCGAGTGTGCGCCTCATTTGAGATTGTTT
TTATGTTCAGTTTTGATGCCAATGTGTACTATGCTTGAAGAAAATATTTT
ACCATGTAGATCGCTCTGTGAAGAGTCAAAAGCTGGTTGCGAAACAGTTT
TATTGAACTTTGTGGGCTTACCGTGGCCTGATAGGTTGAAATGCGATCAG
TTTCCTGTCAGTGGTAGCGGACAAGTTTGCGTGGAGAACAAGAATGCTCA
GCCTAACAAAAAAACGTGGGGTAAGAATCAATTTTTCGTTTCCCAACTGA
TATGTTACGTCAAGACAACGTTCATTTAACGCCTATAGGCTATTTCAAAG
TCGCAAAGCGTAATGGGAAATCAGTACCTCTGCGCGCTAATGACGACTTT
TGGTCCAAAGTTTTGAAAATTCTCAAAGATTGTTGCATCTAGCCAACTGG
AAGTCGTTACTAGAGTGCAACCAGTCCTGATTACCCATGATTCATTTTGA
TTGTGAAATGCCCTAAACACCTGTCATCTCCTGAAAGTTTTTCGTCCATA
TTAGTGCCATGAACCTATAAATTTCAATAAGTATACACATGTTATTCTTA
ATTTTTACAACAATGCACCAATAACGCTCGAATCACGTTCGATGGGCATT
GTAACAACTTCTCCTAATTCTGTCAATAGAGAGCGTACTTGGTAAAATGA
TGGAAGATATCTCCATTTTTAATCATGAGAACAACAACGATACATAGCAA
CTTCCGTACATGCTCCACTTCTGTCTACATTCCTGAACTTTGCTACTAAC
GATTTCCTGGTGGTACCGCCCTTTGCGTCTCTACCCCGCCTCTTTCCTTG
CTGAGCGAATTAGTGACCGACATACCTTCCTAGATAGCTTATGGCTCATT
GAAAACGGATCTTCTCTTANAGTTACGTCAAGACAACTTTCATTTAACGC
CTATAGGCTATTTCAAAGTCGCAAAGCGTAATGGGTAATCAGTACCTCTG
CGCGCTAATGACGACTTTTGGTCCAAAGTTTTGAAAATTCTCAAAGATTG
TTGCATCTAGCCAACCGGAAGTCGTTACTAGAGTGCAACCAGTCCTGATT
ACCCATGATTCATTTTGATTGTGAAATGCCCTAAACACCTGTCATCTCCT
GAAAGTTTTTCGTCCATATTAGTGCCATGAACCTATAAATTTCAATAAGT
ATACACATGTTATTCTTAATTTTTACAACAATGCACCAATAACGCTCGAA
TCACGTTCGATGGGCATTGTAACAACTTCTCCTAATTCTGTCAATAGAGA
GCGTNGGGGATTTTTATCAAAGCGAGACTGATACACGCGGTCAAACGAGG
GCTACTGACAAAAAGACATTATGTATACTTTATTGGTAGCAGGAATATTT
TTAACGACTTTAACAACGGCTTATGAAGCCAATCGTAAATGTGAACCCAA
CAGGGCGGCGCTTTGCAAAAACTTATACAACTCGACACGGTTTCCGAATT
TCGTGAAACATCGGTCACAGGTAGATGCAATTATCGAATTAAACCAGTAT
AAACAACTCATTGATATCGAGTGTGCGCCTCATTTGAGATTGTTTTTATG
TTCAGTTTTGATGCCAATGTGTACTATGCTTGAAGAAAATATTTTACCAT
GTAGATCGCTCTGTGAAGAGTCAAAAGCTGGTTGCGAAACAGTTTTATTG
AACTTTGTGGGCTTACCGTGGCCTGATAGGTTGAAATGCGATCAGTTTCC
TGTCAGTGGTAGCGGACAAGTTTGCGTGGAGAACAAGAATGCTCAGCCTA
ACAAAAAAACGTGGGGTAAGAATCAATTTTTCGTTTCCCAACTGATATGT
TACGTCAAGACAACGTTCATTTAACGCCTATAGGCTATTTCAAAGTCGCA
AAGCGTAATGGGAAATCAGTACCTCTGCGCGCTAATGACGACTTTTGGTC
CAAAGTTTTGAAAATTCTCAAAGATTGTTGCATCTAGCCAACTGGAAGTC
GTTACTAGAGTGCAACCAGTCCTGATTACCCATGATTCATTTTGATTGTG
AAATGCCCTAAACACCTGTCATCTCCTGAAAGTTTTTCGTCCATATTAGT
GCCATGAACCTATAAATTTCAATAAGTATACACATGTTATTCTTAATTTT
TACAACAATGCACCAATAACGCTCGAATCACGTTCGATGGGCATTGTAAC
AACTTCTCCTAATTCTGTCAATAGAGAGCGTACTTGGTAAAATGATGGAA
GATATCTCCATTTTTAATCATGAGAACAACAACGATACATAGCAACTTCC
GTACATGCTCCACTTCTGTCTACATTCCTGAACTTTGCTACTAACGATTT
CCTGGTGGTACCGCCCTTTGCGTCTCTACCCCGCCTCTTTCCTTGCTGAG
CGAATTAGTGACCGACATACCTTCCTAGATAGCTTATGGCTCATTGAAAA
CGGATCTTCTCTTAATTCCTAATTTAGATTTTTCTGAAAAATTCAATTTA
TTAATTTATATCCTTCCCGAAAAATGCGCATGCCATGATTTACGCGAAGT
TGAACTCCGGACGCGTAGGCGTGGATTGAAATTCAAAAATTACGGAAACG
AAAATTATGAAAAACTAAATTAAGCCATTTTATTTATAGCCAAAATAAAT
GGCAATGGAAAATAGTTAAGTGTCTCCAAATAATCTTTGTTTTTATTGGC
TTTTGGTTTTTCTCTTGACGCCTTCGTAGAAGTGTGACTACTTTTACTAT
AGCAATGCAGCTCAACTCTAAACCGTTTCAGCAGGCTAAACATTAGACTG
TATGACAGTCGTTTTTTCTTACTCACATATCGGGAAAATTAAGTCGAAAC
AGGATGATACAGAAAAGTCTCCATGACTCAAACGCGCACAGGGAACACAA
ATTTGTTCGAGTTAAGGTCTAAGGAGACTTAAGGTTTAATAAGGAACTAT
TAACTGAAGGGACAGTTAAAATTGTTCCAATTAAGGAGACATTCAAGTTA
TAGAGATTCGAGTTAAAGAGACTCTACTTCTATAATAATCGGGAAAAACC
GCGAGATTAGCTTGGAAATAACGTATAGTGATTGTATAAGTGTAAGGAGA
TAATTGGCTGCAGCGTTATAGGCGGCTATATTTAACTATTCTTAACACCG
TTTTAAAAGTTCGTAAGGTTTCGAGATAAGGGATATAAATTGAGTGAATG
TTTTGCGTAGAATTTTTGGCTGTGATTGTTTACACTGTCGATGATACAGT
GGTCAATCTGGGGTTTTAATGCATTTACAAAAACAAACTTTTCTTTAGAG
TATTGACGTATTTGAAGTTCAACTTTGAAGTAGGTCATCGTTGAATAATC
ACTCAACACTCAACTTCCTGACTTGAGAACTCTATCCATTTGTTTGTTGC
GCTCTCGGGGATTGAGGAAGAATTCTCCTTTCAATGTTAACTTTTTTGTT
CCTATATGTTTGCATTTTTATGACTTTGATAGAACTCACGAATAATTTCT
CTAGGAAATTTCTTAGGATTAGCACAACAAAATATTCACAAAATAGTGAG
AAAAAAAAACGTTTTTAGAACATTTTAGGCTTACGACTCAAATACTTAAG
AATATCGAAAGGCTTTAAAACGCAGGTACCCTTGAACCGTCTTCACTCGT
TTTTAGCCTGTAGTCATAAAATAAAATTGATATCCAGTCTGCTTTTTTGA
AAGGTGTCAAAAAGAGGCTTTTGCAATTCACACCTTCTAAAACGGTTCCT
CCCTCCTCAATATTATGAGATTGGATGGCAATTAACAGTTTTAATTAATC
ACTTAACTCCAGCCCCTATTTGTCGAGATGTCTGTTATTTATGACGTCTT
CATAACAATTAAGAGATCTGTAAATATTGTGTCCGGACTGTCTGACGCGT
TTTTGTACATCCCTCCCCTTTTCTTCGCTGGAATTTCGAGCTATCATTTC
TATTTTCTTTTTAGTGGACCCCAACAAGCGAAGTAAAATGACTGAAAAAG
AGAAAGCCATTCTTATTTGTAGTAAAGGCCAAAAGATTCGGTTCCGTAAG
ATAGTCCACGAAAATAAAAATTGCAAGCGTCACATCTCTCAAGAAGCGAT
ACGTAAGAAATGTGATGGGGAACATACTTGTGAGTTCACGCTCAAAGACC
TCACCAATGAAAGAGGACAAGGGAAAGGTTNTGGCAAATTCTTGATATTA
TGTAAAATTATAATCAAACTTCTGCTCACCATCCAAAACAAACATTATCG
AGCTATCATTTCTATTTTCTTTTTAGTGGACCCCAACAAGCGAAGCAAAA
TGACTGAAAAAGAGAAAGCCATTCTTATTTGTAGTAAAGGCCAAAAGATT
CGGTTCCGTAAGATAGTGCACGAAAATAAAAATTGCAAGCGTCACATCTC
TCAAGAAGCGATACGTAAGAAATGTGATGGGGAACATACTTGTGAGTTCA
CGCTCAAAGACCTCACCAATGAAAGAGGACAAGGGAAAGGTTGCAGACCC
GGTAAAATTGGTTCAGCGAGCATCAAGTACCAATGTTATAAAGGTAAGCG
AGACAGAGTTTGTTTTTTTGTATTGACTTGATTCCTAGGTGGAGAGGCCG
CCTTTAAGGTTAAGTCTTTCAGGCTTCAAAAGTGCACTGTAAGGGTCAAT
ATTAGAGAAAGTGCACTCGAAGGGTGTAAAAATTGAGTAAAAACTATTAG
CTGTGAAATTCTGGAAAAACGGACCTTTTGTTGCCTTCTAATGGAAAAAA
ACCTTCGAGAAAATGCATCGCGAGGGTCGATTTTCAAAATTTGGCTTAAT
TTAAGAGCTCTAAGGGCTAGACGTGATTTCTAAATCGCCTTCACTTTTAA
GACATTTTGTCTGGTATTTGAACCAATATGCAAGCAGCTACTTATCGATC
ATAAAAACAAACTTTAGGAAGAAAAAATCTTCTCACGTTACCATTTGCGT
TCAAAAATTATTATTGACTCAATCTAACGTTACTTTAAACCTATATTACA
GAATTGCACACGCCATTATAGATTTTATCTTTTTGTAAAAGAAACCTTTC
TATTCTCAAACTAGAAATTCAAGAAGATTTCGATGGTTTTGTGACGAACT
CCAATAGACGATATCGGCTTTCCGAATTCTCCCCGAATGATTACCCATGA
TGCATTGCGCAAAAAAATTCACGGACAATATTGACTTACTGAATTTGTTT
GCGCAATGCATCATGGGTAATCATTCGGGAGAATTTCGTTAAGCCGATAT
CGTCTATTGATATAATATCCTTTATCCTTATAGGAATCTAAACTTATTCA
TGATATTTACGACGCAATGTTTTTCTACAGAAACACCCCTGTTTTGACAG
TGGCGGAAATTTATGCTAGAGAAAATTTGTTTAAAATTGTCATTACTGGA
AAAAACCGGGGTGTTTCTGTAGAAAACATCATTGAATGAATATCATAAAC
TAAGTGGTTTTTAAGGCCTAAAACGTTTATAATTTTCACTAAATTATCAA
ATTGTTGTCAATCTCTTCTAGACAAACCGCCAAAGCAGATCCATTTGAAA
TATCGCCAAGATGCATTCCTTCTCTGCAAAAGCGCTAATCGAAGAATCAA
TATCTTGAAAGTTCAGTACCGCGACGAGAAAGCGGCCGACACCTGCATCA
CACCGAACGCCTTCTGTAGCGTAACACAATCNCGACGAGAAAGCGGCTGA
CACCTGCATCACACCGAACGCCTTCTGTAGCGTAACACAATCATGTACTG
GAAAACAGAATTGCGCTTTGTATTCCGATAACTCATTTATACCCAGTCCC
TGTAAAAATCTAAAACCGAAACTCATTGTTGATTATGAATGTGAAAAAAC
ATTACCTGGTAAGCTTTTTCTCTTTCATCCCTGGGGACGAATACTTAAAT
TCGTAGGGTCAGCCTCGTTCTCATTTCTGATTGACACTTCTGATAAGGCA
ATTATTTACGGCTATGTTTGACATTTGGAAGGTGGGTGGAACTGCTTCAC
TTTTACTTTGAGTTCTGTAACTCACTTGAGTAATGCACTTGGAACAATGT
TAGAATGGTATGGGGACTACTCAAATATATTCTTCACTGAAATGGATTTA
GATTATTAAGTACCTTTGAAAAATTCGGGTAAAAATTTATAATATTTTCT
CTTTGTTGTCTTTTCTTATAGATGAAAAAGTTGTTCAAGACTTTTGGGAA
AACATCGAGTTAAAATGTCCTGCGGGTAAACTGTTGAACATTGTGCGGGC
TGAGTACATTGGATCGTTATGCAGTAGTAAGAACATTCACTGTGCTGTCA
ATTTATATTGTAAGAAGAAACAAAACTGTATTCTTAAAAATTCTGATCAG
CGAGCTGTCCAATGTAAAGACGAGCGGAGTAAAGTTAGTATCCGCTACGC
GTGTACTTGAAGAAAAGCCGTGTTTTCAGGTGATGATAGAAATAGAGTGT
TTTTGCGAAGCCCTTTCCGCTTTAATGAAAAATTCTCTTTGGAAAGTCGC
GAAAACGTATTAAAATTTGGGATTAATGCAACAATGAATGACTCAATGAT
GGTGATGATGACTCAATGATGGTCAGGTTGGTTTGACGTCGCATTGATGG
AAAAGTGATATTTCTTTCCAAAAGACTTTCTGTTGCAAGATGGATACAGA
ATTTGATGTTATTGTTTCAGTGAATTTTATCTTGATAAACGATAATTTTA
CGATAATTTCTAGATTTTATAAATATCTCTAGATATATAGCAGACTGAAG
CAAATTTTCCGTCAATTCCTAATAGATTCGAGACTGTTAGCAGGTCTGTC
TTTAGTCTGAATCGCAGACCTCTACAAAACCCCAGGTAGTATAAGGAGCA
CGAATCCGTTAGTGGATGCCAGCAGCCTAGTCTGTCTTAGAAAAGGGGCG
CATTTTTAAGACAAAAATGTTTTGCTTTTTTCACATTTTGATTTACTTGA
TGAAGAAAGACCCAGGGACGATTTTTTTTATTTTTTTAATAAAATATCCA
AATGACATTTTTTGTTTAAAATTGTAAATTTTTAAGAATTAATTAATTTT
TTTTATTTTCATACATTTTGTTTTTTTTTCTTCGGAATGTAAAAAGATAG
TAAAGTTAGTGACGTAGTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036146XLOC_036146Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057365-exon-scaffold_288-1575043694:407737..408606TCONS_00057365-exon-scaffold_288-1575043694:407737..408606Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1575043694:403830..404042TCONS_00057365-exon-scaffold_288-1575043694:403830..404042Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1575043694:403464..403517TCONS_00057365-exon-scaffold_288-1575043694:403464..403517Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1575043694:402149..402485TCONS_00057365-exon-scaffold_288-1575043694:402149..402485Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1575043694:400884..401835TCONS_00057365-exon-scaffold_288-1575043694:400884..401835Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1510915933:407737..408606TCONS_00057365-exon-scaffold_288-1510915933:407737..408606Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1510915933:403830..404042TCONS_00057365-exon-scaffold_288-1510915933:403830..404042Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1510915933:403464..403517TCONS_00057365-exon-scaffold_288-1510915933:403464..403517Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1510915933:402149..402485TCONS_00057365-exon-scaffold_288-1510915933:402149..402485Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1510915933:400884..401835TCONS_00057365-exon-scaffold_288-1510915933:400884..401835Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1491911889:407737..408606TCONS_00057365-exon-scaffold_288-1491911889:407737..408606Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1491911889:403830..404042TCONS_00057365-exon-scaffold_288-1491911889:403830..404042Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1491911889:403464..403517TCONS_00057365-exon-scaffold_288-1491911889:403464..403517Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1491911889:402149..402485TCONS_00057365-exon-scaffold_288-1491911889:402149..402485Clytia hemisphaericaexon
TCONS_00057365-exon-scaffold_288-1491911889:400884..401835TCONS_00057365-exon-scaffold_288-1491911889:400884..401835Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:400884..408606 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.03294e-07	1.20695e-07	2.70873e-09	2.32117e-06	0	4.63602e-09	9.07816e-06	8.86527e-07	0	0	0	0	0	0	0	0	0.332128	0.000203454	2.93654e-05	6.77003e-10	0	8.75428e-07	3.78607e-06	1.62001e-06	0	0
Blast
[Close]
BLAST of TCONS_00057365 vs. Swiss-Prot (Human)
Match: FZD7 (Frizzled-7 OS=Homo sapiens GN=FZD7 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.004e-29
Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 3 
Query:  495 CEPNRAALCKNL-YNSTRFPNFVKHRSQVDAIIELNQYKQLIDIECAPHLRLFLCSVLMPMCTMLEENILPCRSLCEESKAGCETVLLNFVGLPWPDRLKCDQFPVSGSGQVCVENKNA 848
            C+P    LC ++ YN T  PN + H +Q DA +E++Q+  L+ ++C+P LR FLCS+  P+CT+L++ I PCRSLCE ++ GCE  L+N  G  WP+RL+C+ FPV G+G++CV    +
Sbjct:   49 CQPISIPLCTDIAYNQTILPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLDQAIPPCRSLCERARQGCEA-LMNKFGFQWPERLRCENFPVHGAGEICVGQNTS 166
The following BLAST results are available for this feature:
BLAST of TCONS_00057365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FZD71.004e-2945.38Frizzled-7 OS=Homo sapiens GN=FZD7 PE=1 SV=2[more]
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