|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057413 ID=TCONS_00057413|Name=TCONS_00057413|organism=Clytia hemisphaerica|type=transcript|length=1284bp
atttgagcgatctgtcgattcggcgcgttttagcgagatttatttgagcg
aaaatagggaaaactcgctaaaacgctaaaattattctcgctaaaatttc
tacgattaaagtagcaTTCGGAAATGTACTGTCCCTTTAAAGTAAAATCA
AGGTTTCGTACGATATGGTCATTCGTACATGATTAAAGAAGAGTATGTAA
TTAAGTCATCACCTGGCAACCCTGACATTTTATGGCGAATACTGAGAGAC
CAGAGACCAACTTTCAACAGCTCGAAGACAATGGTTGCAAATCAATTGCT
TTTCTCAAGACGTTGTTATGGTTAACAGGGCTTAATAGAGAGAGataatg
atttttcaaaagCTCATGATTTTGGCTTGAAGctagattaaaaaaaagtc
acttgtttgttttcacacacgAAGATTGGTGAACTGCAGAGAGTAGAATT
GCTGAGAGAAAGTAGAATTTTGGgcattgaaattttttcatagttgtgcc
aaaaatttgaaaaaagctgGTAACACGAACGGAGATGGgataatttaaag
gacctcagTGGTAGgtccaaaatccaaaaataaattaaagaataacaaat
tgaataatgatttttgaGATGAAAATCTTCAGCTCATTTCCGAGGAGTAA
Cccaagaagaatttccagggggtctaaagaagtgtttttcatttttccag
ggggtgaaaacttattctaaaatttccagagaGATAAAAGATTGATTTTA
GTTTAAGTTATAAAAAGAACTTTTCCAAGgctttctttgcaaattttccG
GGAGGTGTCCACACACtaccaaaatttttagaattgaaaagggtggacga
accttgtatggatttttaaaggaaaagcCCACCCCAAAACCAGACATTTA
AAGCAATGTGACTTTAAAAGCCTCACAACGGCTTCCGTTGAAGCATATAA
ATATCAATGAGATGTTTCATGAACAGTTTGTTCCCTATGTCCATCTGGGA
TATGAGTAACATCTCTTGAAGCGTGAATGGTGTTTCTCTTTTGTCTTCCA
AACAATTTCTtacaaaatttcatgattttcttaTTCATGAAAATATGTGC
GGTGGTGTGATTCTGcccgcatcagattgttttttatctttcttctgttt
tgtttttctggtctaggattcgaatttcgaatgtaaacattctattgaaa
acgttcgaaacgatcgtttttgcgcgcacatcaatgtcaatctaATTATA
ACTCGCcaagattctgtaaaatacatcgaattaa Run BLAST on NCBI transcript from alignment at scaffold_288:59250..60533 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057413 ID=TCONS_00057413|Name=TCONS_00057413|organism=Clytia hemisphaerica|type=transcript|length=1284bp|location=Sequence derived from alignment at scaffold_288:59250..60533 (Clytia hemisphaerica)
ttaattcgatgtattttacagaatcttgGCGAGTTATAATtagattgaca
ttgatgtgcgcgcaaaaacgatcgtttcgaacgttttcaatagaatgttt
acattcgaaattcgaatcctagaccagaaaaacaaaacagaagaaagata
aaaaacaatctgatgcgggCAGAATCACACCACCGCACATATTTTCATGA
AtaagaaaatcatgaaattttgtaAGAAATTGTTTGGAAGACAAAAGAGA
AACACCATTCACGCTTCAAGAGATGTTACTCATATCCCAGATGGACATAG
GGAACAAACTGTTCATGAAACATCTCATTGATATTTATATGCTTCAACGG
AAGCCGTTGTGAGGCTTTTAAAGTCACATTGCTTTAAATGTCTGGTTTTG
GGGTGGgcttttcctttaaaaatccatacaaggttcgtccacccttttca
attctaaaaattttggtaGTGTGTGGACACCTCCCggaaaatttgcaaag
aaagcCTTGGAAAAGTTCTTTTTATAACTTAAACTAAAATCAATCTTTTA
TCtctctggaaattttagaataagttttcaccccctggaaaaatgaaaaa
cacttctttagaccccctggaaattcttcttggGTTACTCCTCGGAAATG
AGCTGAAGATTTTCATCtcaaaaatcattattcaatttgttattctttaa
tttatttttggattttggacCTACCActgaggtcctttaaattatcCCAT
CTCCGTTCGTGTTACcagcttttttcaaatttttggcacaactatgaaaa
aatttcaatgcCCAAAATTCTACTTTCTCTCAGCAATTCTACTCTCTGCA
GTTCACCAATCTTcgtgtgtgaaaacaaacaagtgacttttttttaatct
agCTTCAAGCCAAAATCATGAGcttttgaaaaatcattatCTCTCTCTAT
TAAGCCCTGTTAACCATAACAACGTCTTGAGAAAAGCAATTGATTTGCAA
CCATTGTCTTCGAGCTGTTGAAAGTTGGTCTCTGGTCTCTCAGTATTCGC
CATAAAATGTCAGGGTTGCCAGGTGATGACTTAATTACATACTCTTCTTT
AATCATGTACGAATGACCATATCGTACGAAACCTTGATTTTACTTTAAAG
GGACAGTACATTTCCGAAtgctactttaatcgtagaaattttagcgagaa
taattttagcgttttagcgagttttccctattttcgctcaaataaatctc
gctaaaacgcgccgaatcgacagatcgctcaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057413-exon-scaffold_288-1491911889:59250..60533 | TCONS_00057413-exon-scaffold_288-1491911889:59250..60533 | Clytia hemisphaerica | exon |
| TCONS_00057413-exon-scaffold_288-1510915933:59250..60533 | TCONS_00057413-exon-scaffold_288-1510915933:59250..60533 | Clytia hemisphaerica | exon |
| TCONS_00057413-exon-scaffold_288-1575043694:59250..60533 | TCONS_00057413-exon-scaffold_288-1575043694:59250..60533 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:59250..60533 . |
Blast
The following BLAST results are available for this feature:
|
