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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000458 ID=TCONS_00000458|Name=TCONS_00000458|organism=Clytia hemisphaerica|type=transcript|length=1974bp
TCTCaattaaacaagaaaaacataaacaaaaaaaatctccTATCTTGCCC
GGAAGcgttttcattgtttttgactCGGTACCAATCTACTTGAACAATTA
TGTGTCACGGCTGACTTATTATACAGCTATAAAATGACTCGTTGATATCA
TATTAAACTGTCATTAGAAATTATACTATCATTAACTTAACAAGTATCCA
GAGAGAAAGAGAAAATCAAGAGTGAATATAAAAATTGTGATTTCAGCCTG
CGTGTGTTCTTGGCTTTAATTTTGCAAGACATCATTTGTATATGTACGTA
GATATTTTTGGTGTAAACGATTGAGTGcagattttcaaatttgggACACA
CCCATAATTCATTGCGATGATTGAGATGAAAATGTCTCCCCACCAACAAG
CAGTGCTATCACAGCAAGTTCCGAACATGAGTTCATTTTTACCGCCCAGT
AAAGCACCGGAGGCGTACCGCCCTTTAAACTACACGCCAACGTCATTCGT
AACCAACTTCAAAGAAATGTCACAACAAATCGActctaacaacaacaaca
acaacaacaataaccCTCATGAAAGCGAAGGAAAATTCTCACCTCGACCA
GCGACGCAATTTTCACCAATGGGCGATTTACGATCACACCCTTCGACGCA
AGATACACATCCATTCAAAACCTTCGACGACTCGAAATCCTTTTTGAATA
ATAATACGCCAAATGGTTCAATGCCCGAACAAGATTCAATTTCATCGTCA
CTACAGTCTTTCCACTCTAGTGGACTTCCAACATCATATACTTCGTCTTA
CAATAACAACTCTATGCAAACGACCCTCTCTTCGCCGTCAAGTATCACGT
CAAATATGTCGAGAAGCTTTTCATCCTCATCTTACGTTAAGCAGGAATCa
gatgaagaagatgaaggAGATCTTACGCAATCGAAGAACGGTAAAGGTGG
AAAATTACCTCGAAAACCACGAACAATCTTCACTAGTCAACAGTTACGCG
AACTCAACCGTGCTTTCGAACGCACGCATTACCTCTCGTTACCTGAACGC
GCAGAATTAGCACACGCACTCGGTTTAACTCAAACCCAAATCAAAATCTG
GTTCCAAAACAAGAGATCTAAATTCAAGAAAATCATCAAAGCTAATGGAG
GACAAATGCCACCGCCATCAAGCCTCGTTTCTGGTGGCAATCCTGGTTTA
TGGCCGTCTGGTTATGGTGAGAAAAGCTTTGGCGGACCACCAATGCCACA
CTTGAGTCCATTCTCACCACCACCATCATCGCATAGTTCGGTACCCGGTG
ATTCTTGGTACTACCGGATGCAATCGGCCGGTGGATACGGAAGTCACGAA
ACCATGTTTCCATACGGTGGCACAAGCGGAACTGATGTTCGAACAACTCG
GCCTAATTTCTCTTATCATATGTAGTGTTTAAACTAATCACCTTTCTTAA
CCCTTAGTAACTGTCTGTTTCTGTCCtgagtatatatttttttcactaaa
aattcacaaattttagttttatctttttttttaacttgtgTTCtacgaaa
attgtaaaaaaaaaagtaacTTCAATATTATATTTTGGAAACACTTTTAA
TCATTGTATAGATGGACAAGTGAAAATATCGAATAGTTTATTTTGTTCgc
tattttaagttttttttgaagagcaaatatttttTAGCCATGGAAATAGT
TTAAAAATGGTATCGAATTAGTTTTTTTGTATATATGTACATAAATTATC
TTACTACAACACACAGTATCAATATTttacaatgaaataaaaatccGAAA
GAACGAAATAGCTAAACCTCTCATACAACTATGTTCCAGCTTCTAGTGTT
TCGATCGAATTTTTCCCCTCGTTAACTctattcaaactaggcttttagga
GTGGTTCCTGTAACAACCCTTAACTTTATCTATTGGGTCTTTTTGGACGA
AATTTGGTACATAAGATCTTTGTC Run BLAST on NCBI protein sequence of Dll1 distalless homeodomain protein >TCONS_00000458-protein ID=TCONS_00000458-protein|Name=Dll1 distalless homeodomain protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MIEMKMSPHQQAVLSQQVPNMSSFLPPSKAPEAYRPLNYTPTSFVTNFKE
MSQQIDSNNNNNNNNNPHESEGKFSPRPATQFSPMGDLRSHPSTQDTHPF
KTFDDSKSFLNNNTPNGSMPEQDSISSSLQSFHSSGLPTSYTSSYNNNSM
QTTLSSPSSITSNMSRSFSSSSYVKQESDEEDEGDLTQSKNGKGGKLPRK
PRTIFTSQQLRELNRAFERTHYLSLPERAELAHALGLTQTQIKIWFQNKR
SKFKKIIKANGGQMPPPSSLVSGGNPGLWPSGYGEKSFGGPPMPHLSPFS
PPPSSHSSVPGDSWYYRMQSAGGYGSHETMFPYGGTSGTDVRTTRPNFSY
HM Run BLAST on NCBI transcript from alignment at sc0000002:1019432..1025647+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000458 ID=TCONS_00000458|Name=TCONS_00000458|organism=Clytia hemisphaerica|type=transcript|length=6216bp|location=Sequence derived from alignment at sc0000002:1019432..1025647+ (Clytia hemisphaerica)
TCTCaattaaacaagaaaaacataaacaaaaaaatctccTATCTTGCCCG
GAAGcgttttcattgtttttgactCGGTACCAATCTACTTGAACAATTAT
GTGTCACNCATAACAAACACATAAAAAAGGAAACAATgatttcgcaaaaa
aaaaattcttcccaAAAAAATGCGCGCTTACATAACAACCaagcaatttt
ttttgtaaaacggtGCGTATCTCAATTAAACgagaaaaacataaacaaaa
aaaatctccTATCTTGCCCGGAAGcgttttcattgtttttgactCGGTAC
CAATCTACTTGAACAATTATGTGTCACGGCTGACTTATTATACAGCTATA
AAATGACTCGTTGATATCATATTAAACTGTCATTAGAAATTATACTATCA
TTAACTTAACAAGTATCCAGAGAGAAAGAGAAAATCAAGAGTGAATATAA
AAATTGTGATTTCAGCCTGCGTGTGTTCTTGGCTTTAATTTTGCAAGACA
TCATTTGTATATGTACGTAGATATTTTTGGTGTAAACGATTGAGTGcaga
ttttcaaatttgggACACACCCATAATTCATTGCGATGATTGAGATGAAA
ATGTCTCCCCACCAACAAGCAGGTAAAcatatttgttttatttgacTCCT
AAGGAACTGTTTTCCACAAGGGTTTTGCTCAGTAATCCTTGACTTCAACC
TAGCGCTCTTGCATAAAACTTCAGTATAACCCCAACATTGCCTATTGTCT
TGTAAATTAAGCAGCTTTCCACTTATAATCACCCACTTCAATATTTGGTG
TTTTCCTAAAGGTAAATGTCAAATGTACTCCTTAAATTAGAAATATCTGT
GGAATCTCCAAACGCAAATTTGCAAAAGTTatatattttcaatcaaatta
aACCTTTCGCAAGTTTTTTTCCTATAATTGCTaataaaagttaaagtaaa
agcTTATAATTATAGTAATTTTCCAACATTGATTTATAGTACTATTTCTA
ATTGCATGTGAaattacaatatttttttcataattacaTGAAATTAATGA
TCAATTAAAGTTTGCTTGACCTAGAAAAGACACAAATCTGCAAATATTCT
GTATTTTGCACACAATTTTAGCGTTGCAAATGCTATTTTGCTATTTTGcg
ggtttttgaaaaagttgcaaaaatttaagaaaataaaaggTAAAAATTGA
AGTTTGTCTGGAAAGAATTAATTTTCATTAACATCATACTAAGTCTCAGC
TTTCTTTTAATAAAACGGCTGAAATATTAGTGAATAATTACTTagatttc
aatttcaataaagATTTTACTAAAGATATACAATGTCATCGCACCCAAAT
TCGTGCTTCCTTAGTAGGGTTtggttaaaaaaatcatttattgtATAACG
CCTTTTTAATGAGGAGAATAATTAAATCTGGCTTTTTCACAAGAATGTAA
AGGTCATTAAAATTACGGAGAATGAATATTAATTACGTGCATTCCATTTG
AAACAAAAGATACATTAAAGTTTGTTTGCAGAATCTTTTGTTGTCCTGCA
GTAGTTGAATTTAAATTAATCTGGTAAAAAGCGGAGtgacaaaaattgga
aaattttatttcatactTTTTGTGAACTTCTGGTGCAAGTTAACGGTAAT
TACAGGTGAACTCAAATCTGAAGAATttgtgaaaataatttttggattGT
TCATTCTTACAGTTTTAAGCTGATTTTTACTATTTTCGGCGCTCTTTTCT
GTCTATTCGTGATTATTATGAGTGactaaattgaaaaatgtcaaaaataa
agcaattatttttttaattgcttTGCGCGAAAGTTGCGCACTTTTCGAAA
CAGGACAATTTAGATAAATCGCTTGGGACTTCTGATTTATGAAAGGTTGT
TTGCAACAAatattaatttattttcaaattaattacgcgaaataattatt
ttttcaataaaaaaatagaaatactcGATGAAGTTTTGCGGatgaaaagt
taactttttatAGCAAATATAATATTCAGCGTTGAGAATTGTTGTGATGA
AAACACAAACTGCGTAAGGAAAATCCCTCCAGTTTTTGTCTCAATCGAAA
AGAAAAGAACTCTGAATCAGAtacagttaaaaaaaaactaaaacagtAAA
ACGAAATATAAAATGGGCGAAAAATATACCAATGCCGTCTGTCATTTTCT
CATGGTTATctcagaaaaaatatttgaagaaataCGCATAATACTCACTT
TCCCCGATATTTTTATTCTAATATTTTCCCATCTTCGCacttcaaaataa
taataatcacacaatgataatttttcaaacaaaaggtcaaaaagaacgtg
ttgaaaaaaaacataatggcCTTCTATTGTTCGTATTATTCTATATTtat
taataattaaaattaACGATAGTATAATTGTGTATAACTGGGCTTAAGGT
TTTAAAACGATTTGTCATTAATTGAAGTTAACTACTCGAATTGATAAGAG
GTCTTCCATtctgcagattttttttctaaaaattggtatgaaattttcat
aaatttgtttataattattttgttAAACGGTACTATATATCACAGGTAGA
TCATTAGTAATTGATTATTTTCATACTTAAGAATTACTTCGGTAATTATA
TATGAGGAGGGGCAGCATAATGCTCTNGTTAACGGTAATTACAGGTGAAT
TCAAATCTGAAGAATttgtgaaaataatttttggattGTTCATTCTTACA
GTTTTAAGCTGATTTTTACTATTTTCGGCGCTCTTTTCTGTCTATTCGTG
ATTATTATGAGTGactaaattgaaaaatgtcaaaaataaagcaattattt
ttttaattgcttTGCGCGAAAGTTGCGCACTTTTCGAAACAGGACAATTT
AGATAAATCGCTTGAGACTTCTGATTTATGAAAGGTTGTTTGCAACAAat
attaatttattttcagATTAATTACgcgaaataattattttttcaataaa
aaaattgaaatactcgATGAAGTTTTGCGGatgaaaagttaactttttat
AGCAAATATAATATTCAGCGTTGAGAATTGTTGTGATGAAAACACAAACT
GCGTAAGGAAAATCCCTCCAGTTTTTGTCTCAATCGAAAAGAAAAGAACT
CTGAATCAGAtacagttaaaaaaaaactaaaacagtAAAACGAAATATAA
AATGGGCGAAAAATATACCAATGCCGTCTGTCATTTTCTCATGGTTATct
cagaaaaaatatttgaagaaataCGCATAATACTCACTTTCCCCGATATT
TTTATTCTAATATTTTCCCATCTTCGCacttcaaaataataataatcaca
caatgataatttttcaaacaaaaggtcaaaaagaacgtgttgaaaaaaaa
cataatggcCTTCTATTGTTCGTATTATTCTATATTtattaataattaaa
attaACGATAGTATAATTGTGTATAACTGGGCTTAAGGTTTTAAAACGAT
TTGTCATTAATTGAAGTTAACTACTCGAATTGATAAGAGGTCTTCCATtc
tgcagattttttttctaaaaattggtatgaaattttcataaatttgttta
taattattttgttAAACGGTACTATATATCACAGGTAGATCATTAGTAAT
TGATTATTTTCATTCTTAAGAATTACTTCGGTAATTATATATGAGGAGGG
GCAGCATAATGCTCCGTCAACCATCCAAAAATGAGAAATCTCTTAGTCCA
ActaataaacaaaaattaatgtttaatTAATATTCTTTCTTCTATTTCAC
AGTGCTATCACAGCAAGTTCCGAACATGAGTTCATTTTTACCGCCCAGTA
AAGCACCGGAGGCGTACCGCCCTTTAAACTACACGCCAACGTCATTCGTA
ACCAACTTCAAAGAAATGTCACAACAAATCGActctaacaacaacaacaa
caacaacaataaccCTCATGAAAGCGAAGGAAAATTCTCACCTCGACCAG
CGACGCAATTTTCACCAATGGGCGATTTACGATCACACCCTTCGACGCAA
GATACACATCCATTCAAAACCTTCGACGACTCGAAATCCTTTTTGAATAA
TAATACGCCAAATGGTTCAATGCCCGAACAAGATTCAATTTCATCGTCAC
TACAGTCTTTCCACTCTAGTGGACTTCCAACATCATATACTTCGTCTTAC
AATAACAACTCTATGCAAACGACCCTCTCTTCGCCGTCAAGTATCACGTC
AAATATGTCGAGAAGCTTTTCATCCTCATCTTACGTTAAGCAGGAATCag
atgaagaagatgaaggAGGTAAAATGTTTATTTATATTAAGGAGATAATA
TTGACTTGTTGGAACTAAAATTATCTTCTTTGAATTTTAATTGACACTGA
TATCTTTCATAACGATAATTTTTAGCAGGTTTTTAGCAGAGAAAAACGTC
TTAGCTACATTGAACATTTTGCAGCAAAAATGTAGGAGGTTTTCCTTTAA
TTTTCAATGAATGTCATTAACATGATTAGGAATAATTAGATGGGTTGGTA
GCTCCTAATTTAATTGCATTTAACATTTGACGTTGGTCATGTTTTTTTCC
CAAAGCTTAAAAATTGTGATAAGTCAAAATGATGCATTCAAACAATTCGC
GATAAAGATCACCATTAAAGTTTTTAATCACCTCCTTGCCATAAATTATC
ACAAAGATAATCAAAACATAAGAATTTCGTAAACAATCAACCATTTCTAT
TTCCAGCGTTAATATCAGATAATTTCAATGATAAAATTATGAAACCTTGC
ATGTgaaaaaaacacgaaaacaTGTCCTAACTTTTTCCTTAATGTTGTAT
TTGTGGTAGAATGGGCGCCTTAATAAAACAGTTAATTGTCGACTTTGCAT
TTGAGTAATGTTTTTCCGTTTTACGAAGAGAAAAAGTCTTAACGACCTGT
GACCAATTTAAGACTTTTGAATAGCTATTAAAAAATACAGGACGTTAAAA
TTAATGACCTCTTTTCATTACCTATTTgaaattgattatttttattgaaa
ctttcctaatttggaAAAAAGACTTTCTCAAGTGGGTATATTGTTTTTAA
TATCCGATAATTGTTGGAAAAATTAATgagtaattcttttcaattttttc
atatcTTATAGATCTTACGCAATCGAAGAACGGTAAAGGTGGAAAATTAC
CTCGAAAACCACGAACAATCTTCACTAGTCAACAGTTACGCGAACTCAAC
CGTGCTTTCGAACGCACGCATTACCTCTCGTTACCTGAACGCGCAGAATT
AGCACACGCACTCGGTTTAACTCAAACCCAAATCAAAATCTGGTTCCAAA
ACAAGAGATCTAAATTCAAGAAAATCATCAAAGCTAATGGAGGACAAATG
CCACCGCCATCAAGCCTCGTTTCTGGTGGCAATCCTGGTTTATGGCCGTC
TGGTTATGGTGAGAAAAGCTTTGGCGGACCACCAATGCCACACTTGAGTC
CATTCTCACCACCACCATCATCGCATAGTTCGGTACCCGGTGATTCTTGG
TACTACCGGATGCAATCGGCCGGTGGATACGGAAGTCACGAAACCATGTT
TCCATACGGTGGCACAAGCGGAACTGATGTTCGAACAACTCGGCCTAATT
TCTCTTATCATATGTAGTGTTTAAACTAATCACCTTTCTTAACCCTTAGT
AACTGTCTGTTTCTGTCCtgagtatatatttttttcactaaaaattcaca
aattttagttttatctttttttttaacttgtgTTCtacgaaaattgtaaa
aaaaaaagtaacTTCAATATTATATTTTGGAAACACTTTTAATCATTGTA
TAGATGGACAAGTGAAAATATCGAATAGTTTATTTTGTTCgctattttaa
gttttttttgaagagcaaatatttttTAGCCATGGAAATAGTTTAAAAAT
GGTATCGAATTAGTTTTTTTGTATATATGTACATAAATTATCTTACTACA
ACACACAGTATCAATATTttacaatgaaataaaaatccGAAAGAACGAAA
TAGCTAAACCTCTCATACAACTATGTTCCAGCTTCTAGTGTTTCGATCGA
ATTTTTCCCCTCGTTAACTctattcaaactaggcttttaggaGTGGTTCC
TGTAACAACCCTTAACTTTATCTATTGGGTCTTTTTGGACGAAATTTGGT
ACATAAGATCTTTGTC Coding sequence (CDS) from alignment at sc0000002:1019432..1025647+ >TCONS_00000458 ID=TCONS_00000458|Name=TCONS_00000458|organism=Clytia hemisphaerica|type=CDS|length=3177bp|location=Sequence derived from alignment at sc0000002:1019432..1025647+ (Clytia hemisphaerica)
ATGATTGAGATGAAAATGTCTCCCCACCAACAAGCAGTGCTATCACAGCA
AGTTCCGAACATGAGTTCATTTTTACCGCCCAGTAAAGCACCGGAGGCGT
ACCGCCCTTTAAACTACACGCCAACGTCATTCGTAACCAACTTCAAAGAA
ATGTCACAACAAATCGActctaacaacaacaacaacaacaacaataaccC
TCATGAAAGCGAAGGAAAATTCTCACCTCGACCAGCGACGCAATTTTCAC
CAATGGGCGATTTACGATCACACCCTTCGACGCAAGATACACATCCATTC
AAAACCTTCGACGACTCGAAATCCTTTTTGAATAATAATACGCCAAATGG
TTCAATGCCCGAACAAGATTCAATTTCATCGTCACTACAGTCTTTCCACT
CTAGTGGACTTCCAACATCATATACTTCGTCTTACAATAACAACTCTATG
CAAACGACCCTCTCTTCGCCGTCAAGTATCACGTCAAATATGTCGAGAAG
CTTTTCATCCTCATCTTACGTTAAGCAGGAATCagatgaagaagatgaag
gAGATCTTACGCAATCGAAGAACGGTAAAGGTGGAAAATTACCTCGAAAA
CCACGAACAATCTTCACTAGTCAACAGTTACGCGAACTCAACCGTGCTTT
CGAACGCACGCATTACCTCTCGTTACCTGAACGCGCAGAATTAGCACACG
CACTCGGTTTAACTCAAACCCAAATCAAAATCTGGTTCCAAAACAAGAGA
TCTAAATTCAAGAAAATCATCAAAGCTAATGGAGGACAAATGCCACCGCC
ATCAAGCCTCGTTTCTGGTGGCAATCCTGGTTTATGGCCGTCTGGTTATG
GTGAGAAAAGCTTTGGCGGACCACCAATGCCACACTTGAGTCCATTCTCA
CCACCACCATCATCGCATAGTTCGGTACCCGGTGATTCTTGGTACTACCG
GATGCAATCGGCCGGTGGATACGGAAGTCACGAAACCATGTTTCCATACG
GTGGCACAAGCGGAACTGATGTTCGAACAACTCGGCCTAATTTCTCTTAT
CATATGTAGATGATTGAGATGAAAATGTCTCCCCACCAACAAGCAGTGCT
ATCACAGCAAGTTCCGAACATGAGTTCATTTTTACCGCCCAGTAAAGCAC
CGGAGGCGTACCGCCCTTTAAACTACACGCCAACGTCATTCGTAACCAAC
TTCAAAGAAATGTCACAACAAATCGActctaacaacaacaacaacaacaa
caataaccCTCATGAAAGCGAAGGAAAATTCTCACCTCGACCAGCGACGC
AATTTTCACCAATGGGCGATTTACGATCACACCCTTCGACGCAAGATACA
CATCCATTCAAAACCTTCGACGACTCGAAATCCTTTTTGAATAATAATAC
GCCAAATGGTTCAATGCCCGAACAAGATTCAATTTCATCGTCACTACAGT
CTTTCCACTCTAGTGGACTTCCAACATCATATACTTCGTCTTACAATAAC
AACTCTATGCAAACGACCCTCTCTTCGCCGTCAAGTATCACGTCAAATAT
GTCGAGAAGCTTTTCATCCTCATCTTACGTTAAGCAGGAATCagatgaag
aagatgaaggAGATCTTACGCAATCGAAGAACGGTAAAGGTGGAAAATTA
CCTCGAAAACCACGAACAATCTTCACTAGTCAACAGTTACGCGAACTCAA
CCGTGCTTTCGAACGCACGCATTACCTCTCGTTACCTGAACGCGCAGAAT
TAGCACACGCACTCGGTTTAACTCAAACCCAAATCAAAATCTGGTTCCAA
AACAAGAGATCTAAATTCAAGAAAATCATCAAAGCTAATGGAGGACAAAT
GCCACCGCCATCAAGCCTCGTTTCTGGTGGCAATCCTGGTTTATGGCCGT
CTGGTTATGGTGAGAAAAGCTTTGGCGGACCACCAATGCCACACTTGAGT
CCATTCTCACCACCACCATCATCGCATAGTTCGGTACCCGGTGATTCTTG
GTACTACCGGATGCAATCGGCCGGTGGATACGGAAGTCACGAAACCATGT
TTCCATACGGTGGCACAAGCGGAACTGATGTTCGAACAACTCGGCCTAAT
TTCTCTTATCATATGTAGATGATTGAGATGAAAATGTCTCCCCACCAACA
AGCAGTGCTATCACAGCAAGTTCCGAACATGAGTTCATTTTTACCGCCCA
GTAAAGCACCGGAGGCGTACCGCCCTTTAAACTACACGCCAACGTCATTC
GTAACCAACTTCAAAGAAATGTCACAACAAATCGActctaacaacaacaa
caacaacaacaataaccCTCATGAAAGCGAAGGAAAATTCTCACCTCGAC
CAGCGACGCAATTTTCACCAATGGGCGATTTACGATCACACCCTTCGACG
CAAGATACACATCCATTCAAAACCTTCGACGACTCGAAATCCTTTTTGAA
TAATAATACGCCAAATGGTTCAATGCCCGAACAAGATTCAATTTCATCGT
CACTACAGTCTTTCCACTCTAGTGGACTTCCAACATCATATACTTCGTCT
TACAATAACAACTCTATGCAAACGACCCTCTCTTCGCCGTCAAGTATCAC
GTCAAATATGTCGAGAAGCTTTTCATCCTCATCTTACGTTAAGCAGGAAT
CagatgaagaagatgaaggAGATCTTACGCAATCGAAGAACGGTAAAGGT
GGAAAATTACCTCGAAAACCACGAACAATCTTCACTAGTCAACAGTTACG
CGAACTCAACCGTGCTTTCGAACGCACGCATTACCTCTCGTTACCTGAAC
GCGCAGAATTAGCACACGCACTCGGTTTAACTCAAACCCAAATCAAAATC
TGGTTCCAAAACAAGAGATCTAAATTCAAGAAAATCATCAAAGCTAATGG
AGGACAAATGCCACCGCCATCAAGCCTCGTTTCTGGTGGCAATCCTGGTT
TATGGCCGTCTGGTTATGGTGAGAAAAGCTTTGGCGGACCACCAATGCCA
CACTTGAGTCCATTCTCACCACCACCATCATCGCATAGTTCGGTACCCGG
TGATTCTTGGTACTACCGGATGCAATCGGCCGGTGGATACGGAAGTCACG
AAACCATGTTTCCATACGGTGGCACAAGCGGAACTGATGTTCGAACAACT
CGGCCTAATTTCTCTTATCATATGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000458-exon-sc0000002-1491911889:1019432..1019452 | TCONS_00000458-exon-sc0000002-1491911889:1019432..1019452 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1510915933:1019432..1019452 | TCONS_00000458-exon-sc0000002-1510915933:1019432..1019452 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1575043694:1019432..1019452 | TCONS_00000458-exon-sc0000002-1575043694:1019432..1019452 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1491911889:1019672..1020053 | TCONS_00000458-exon-sc0000002-1491911889:1019672..1020053 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1510915933:1019672..1020053 | TCONS_00000458-exon-sc0000002-1510915933:1019672..1020053 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1575043694:1019672..1020053 | TCONS_00000458-exon-sc0000002-1575043694:1019672..1020053 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1491911889:1023234..1023749 | TCONS_00000458-exon-sc0000002-1491911889:1023234..1023749 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1510915933:1023234..1023749 | TCONS_00000458-exon-sc0000002-1510915933:1023234..1023749 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1575043694:1023234..1023749 | TCONS_00000458-exon-sc0000002-1575043694:1023234..1023749 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1491911889:1024593..1025647 | TCONS_00000458-exon-sc0000002-1491911889:1024593..1025647 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1510915933:1024593..1025647 | TCONS_00000458-exon-sc0000002-1510915933:1024593..1025647 | Clytia hemisphaerica | exon |
| TCONS_00000458-exon-sc0000002-1575043694:1024593..1025647 | TCONS_00000458-exon-sc0000002-1575043694:1024593..1025647 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:1019432..1025647 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0043565 | sequence-specific DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0043565 |
sequence-specific DNA binding |
Blast
BLAST of TCONS_00000458 vs. Swiss-Prot (Human)
Match: DLX1 (Homeobox protein DLX-1 OS=Homo sapiens GN=DLX1 PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.232e-26 Identity = 51/74 (68.92%), Postives = 63/74 (85.14%), Query Frame = 1
Query: 937 NGKGGKLPRKPRTIFTSQQLRELNRAFERTHYLSLPERAELAHALGLTQTQIKIWFQNKRSKFKKIIKANGGQM 1158
NGKG K+ RKPRTI++S QL+ LNR F++T YL+LPERAELA +LGLTQTQ+KIWFQNKRSKFKK++K G +
Sbjct: 122 NGKGKKI-RKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAAL 194
The following BLAST results are available for this feature:
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