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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000151:492333..498460- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00253.0 ID=Blg00253.0|Name=Blg00253.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6128bp|location=Sequence derived from alignment at Sc0000151:492333..498460- (Branchiostoma lanceolatum) ATGCCCAGATCCGGCCCTCTGCGAAAGAGTGCTGGCTTTCTCCTACGAGG
CGACGGAACGCACTGGCACTACCACCACGGTAGAGGAATTCATGCATGTA
GGGTAGGTGTACCACAATTCGTAGTCAATCTTCATTTGGTCAAAGCAAAT
GCCAACTTTCCTGCAGAGGTGTTGTACGGCGAACTCTCCAGAGGACGGTG
GAAGGGCAAGAGAAGCGGTTTAAGGACCAACTGAAGACAAATCTGAAGGA
GTACTCAACGGGATAGTGGTATTGTGATGGTTTTTATTACATAAAACCAT
CACAACACCAATATCCCGACTACTTTGTTTATCCAGGTTCCAATGCTACT
ATACTTTTCAGTACTAGATAACAGGGATATCTAATCAAGTCAAAATTTTC
AAATGTCTCTACTAAAAAAAGGGTTGTCAAGTAAAGCGTTATCAAATGCA
AATTACTACAACGGTGTGCATAGTCGATAATTGCAGAGACACAAACAAGT
AGGTTTTGAGATGCTTTTTTAGCGCAAACAATGCTATTAGTCAAAGCTCC
CCACTCTTGGCAAAATCATGTACAAGTAGTACATATTAGGATTTAGATAC
AGTAAAATCGCTTACGTGTGGTATCGTTTTTTTTAATGACTTGTGATTGC
TCTTGCGGATGTATAGCACTAACTGTTTTACTAACTTCATTTTTCGATTT
TATTATTTTATAGCTGCAGGAAACACGGGAGGCAGTGATAAAGAGACGGA
GGAAGAGAAGGCCCTGTGGTTTGGGGTTACAGTGGACTTCATGTCGGACG
AAGAGAACGGGGAAGAAGACGGGAAACCACTGTGGCTGGTGAAGCCTGTG
GCCTTTAGAAGTGCGGAGCTCTTCGCAGCGTTGTGCAGGCAAAGCTGGAG
GCTGGGAGAAAATACCGGGCAACACACACGGCTCGTGTTAGAAAGGACGG
TGTGTTCAGCGAGAGATTTCCCCCCCCCCACCCCTTCCCACCACCCCCCA
AACAGCCTACGACCACAACCTAGCCACATTGCACTTCACATCCGACAACG
TTCCAAGACCGAAAAACCCCATCGGCCTTTTCAAAATCAGTATTAGAACG
TCCACCCCGCACGACAGGCAGACAGCCCCAGGAAGACAGAGTTTAGTATT
CCAAGATAGTATTGACTTCGGTGCCCTCGAGGTCTTCAATGGAGCTAGTT
TTGTAGAATGGGGTCTTTGATGACACTAGCTATTATCTGACTGAACTGTA
GGGGTATTGTTTCAATTTGCTGTATAGTGTTCACCAATAGCGAGTTATTT
GTAGCCATTGCATTTTGTACTAATCTCAGGACTGTTCATTTTCATGTATT
TCTTTATAGGTTTTTGCTTTTTGTATTCACATAGGGTTTTTACTTTTTGT
ATTTATGTCAGCGTTTGAAGATGTTCGCTGTCTATCATTCAGGAATAATT
TTACAAAGACCACGTGTATGTAAATATGGTATGTGCTTTGTTCGGGCAGT
TTTATTCATTTTTTTGATTTTATTAATGTCATCTTTTCCTTTTGTTTATT
TGAGGACTATAGTCTTTTTAGTTATTCAGTTTCTGTTAAAAGGTGTGCCA
ACCTGGTTTAAGAAAACACGAATAGAGATTCTAGTGTATTCTAAAAAAAG
TCTTCATAGTATTTCTTTGTGGTTAAGGTGTGCCAGTATGATGAAAATAA
TGTATTTCCCAGTGGTTTTACAACATGCACCATGATTACTTGCCTTAGCC
CAATAAAATGCCGGCAAGTATGAAAAAGGCAGAAAAGATCATCAAAGACC
TCCTTCTTCCGACAAAAGAATACCACGTCTGTCAGAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTTT
TATGTCAGTGAAAGTTTTGTTCATTTTCGAATTCAATAGCATTGTAGTCT
TTTGAGTTGTTTAGTGTCTGTTTTTATGTTAGGGTAGTATGCTTTGGTAT
GATGTTAGTAACAAGTAATGTACCTCTGCTTGTAATTGCTGCTTATTTCT
GTTAAAATGTGTGCCAACCTGGTTTAAGAAAACACGAATAAAGATTCTAA
TGTATTCTAAAAAAAGTCTTCATAGTATTTCTTTGTGGTTAAGGTGTGCC
AGTATGATGAAAATAATGTATTTCCCAGTGGTTTTACAACATGCACCATG
ATTACTTGCCTTAGCCCAATAAAATGCCGGCAAGTATGAAAAAGGCAGAA
AAGATCATCAAAGACCTCCTTCTTCCGACAAAAGAATACCACGTCTGTCA
GAACGACTGTATGGTCCTCAGCGAGGAGCACGCGGATCTGTCCCACTGCC
CGGTGTGTGGATCTTCGAGGTACAAGGATGGTGGACGGGTTCCCCGGATA
AAGTTCACCTACCTACCGCTCATCCCGCTGCTACGACAAGTAAGTTGCTA
CATTTCATGAGTTATGTGTCCGTCTAATTTCAAATTCTGTTTTAAAGATC
ATTTGTATAAGCAAGAACATTACATAGATCTCGATTTTGAACTGTATTTG
AGCTGTATCATGATTTCAACTTGATGTTGAAAACACCTAACACACACTTT
CTAATTTATTATAATTTAGTTATTTACTAATTCTTTATCTTGCTTACGAC
AGACGTTCGAGATACCGGGAGTCGCAAAGGCACTGCAGTCCCACTGGCCT
CGACCGAGAGCAGATGACGGCGTCATGCGGGACATCCATGATTTGCCAGC
CTGGGCTGAGGCTTATGAGCCTGGCGGTAAGTTTCAAGATGAGCCTTATT
GTCTCCAATTTGAATTTTCAGCAGATGGACTAAATCCGTTTAATCTCCTC
AGGTCATCGTACTCGATGTGGCCGGGGTCTGTGAAGATTCTTGCCACCCA
CTCAGCGATCCAAAGTCGCGCATTTGAAACCGGTGATGTTGATTCCAGGT
AGGTGCATATTGATTAACTCACACAGAGCTCTAATATAAGATTGTTTTAC
CATCATACGTCCATTTCTCCTATAACTGAATTAAGTGATTTCAAACGGAC
TCCAGGATGAATTGTGTATGAATAACCACTAATGGAGATCCTAATAAAGC
AAACAAACAAAACGGATCCCTTCCCTCCAAACTGTGTCAAATGCCTTTCT
AAAATCTATGAAACATGAATAAAAGCATTTATTTTATAGAAATATTTAGT
AATTAGCGAGTCTAAGGCAAAGAGATTGTCGTTTGTGCTGAAGTGTTGAA
GCAATAATCACAATGATGTGTGGATAGGTCCCAACTAGCCGGGGATTATG
ACCCCCTACCTACGGCCCTTTGTGAACGAAATACTGATGCTGGAGAAAGA
AGTTCTCATCTACGACGCCTCCAGAGAACGCAACATCAACGTCCGAGCGA
CATAATGCTGCATGTTATGGAGTATCCAGGCATGTGTAACGTCGGGAAAT
TTAAAAATGTAGGGGCCATCAACGGATTCAAAAATTGTTGGCTTCCGGGT
AAGATTTATTTCAATCCAACTTGATATGTATCTTTTTTTTAATGCAACAC
TGTAGACACTGTTTGTAAATGTGACGTAGCAACAGTCAAATTTCATTCAC
ATACCAATAGTGTTTCTGATTTGGCACTCAAGAACTAAGCTACCGTTTGT
GCTGTCTTAAGGAACGTATTCAAAGTCGCTACGAAAGGTCGACTATGTTG
GTCATCGGATGTGATGCTGCCAGTCACTTGAGTTCCCAGAGGCAACACCG
GAAACCCGCGGCCGTCTACCCATGAAGACCAAAGACGAAATGTTGGGGTA
TGGAAAGATCTATGACAAGTTGTCAACGCCTGCCCTCAGGAGCCTCATCG
CCAAGGCTACTGGCAAAACCAGTGTAGAGGAGCTCTACAGACTGGAGTCA
CATACGCCAGAGAAGTACGCCCCGGAGTCAATGCATCTTGCAGGGGTGAG
ACTTCTTCTTTTGTAAAGTGAAAAAAAGGTAAATGGATAACTGTTGATAT
GGTTAAAAACTCAAAGGACAGACACTTGAGTATTCATTGCGCCCATACTT
TGTTACTTGTCTTATAGGATGCCACCTGTAGATTTCGTGGGATGGTGAGT
GGGGACACAGACACATTGAAAGTGCGAAAAGCCGAGCAGCAACTCAAGAG
GTTCCCGAGCACCTGGCCTATCAACTCCGCGACAGCAAAGATACGACGAA
AGTTGGTAAGAAGACAACCAACTAAAACAAGAAGAAGAAAGTGATCTGCG
GACCCGTTAGCCGTGTAGCTGATTCGTGAACAAGGTGATATATCTTTTTC
CTGGATTGTCTTTAACTTAATCTTTTTTTAACAAAACATACATTTCAAAC
ATGTTTCTGAATTAATCAGATGATATGGAACACTCTCCCTTACTTTCGCC
AGACCGAAGCTGCACACTGCCCCATGGGCACTGAAGCCAGCAGAGAAGAC
AAAGGCTGACAACCGCCTGGCCAGCATCAAAGTCCTACTTGACCTTGGGT
GGAACTCCAAACGGATTTTTGCGAAGTTCAGCTACATGAAGAGTCACGAT
TAAAAAGAGGTTAATTCGTTGATTAGCTGGGTACATTTTGACGATTAACG
AGACTTGTGCTAAATAGACGTCACTCGAGCAATTGGATATTATTTTCAAA
ACTTATGAAAATGCTTATAATCTTATTTCATTTTTACAGTTCGCAACGGA
TGCCGTGCACGGCCTATTGGGTGAGTATCAGCGGAAGACATTGGGCAAAC
TCTACGACGTCTTTGGAGCGCTAACCCATCCCACCGACAAGAAGCTTTCA
CATATCCATTGGCATCGGCCTTGGAATCGCTCCTGGTAAGTTTTCATAAT
GATTTTGATAGTTTTCTCCTTTCTCGTACATGTACCAAGAGCTAACCGTG
TCTACTATATATATATTAATCCCTTAACTAAACCTGTTTACATATTTTTG
TTTTACAGTTAGCTGAGTTCTGCCAAGCAATGGTTTTTTCCCCAACATGT
TGCCGAAGTAACCATTCCTACCACCATGCCGGGCAACACATTGTGAGGAC
CTCAGCTAGTCACCCCGTCCTTCGTCCTGACAGGGAAAAAATGGAAATGC
GAACCTTTCGAGATGTCGCAGCCACTGCATGAGGGCCTGGCCAAGTACCG
CCTAGCCACCAACTCCACGTACACCGCGCTACTCAGGTAAAGTCTTGCTT
GAGTATGTGTGGATGGATATTTCACCATTTTATTGTTGACAAGTTACTTC
AAATGGAACCTCCTTATTTTATGAACCCAAACAAATATACTAGTGTGGGA
AAAGTTCATTATTTCGTGTATTAACAAAATGTTCATATTCTACAGCGAGT
TGCATGGACCATCCATAGAATGGGGGCCCCGATCATTTTTCCCAACTACA
GGAATGCTGACACTTATCAACAAAAGCTTATTTTTGTCTAGATCACTACA
GACAGAAAGGACGATGTCTGGAAGCTGGCTACCACTGAAGTCCTGGCGGC
CCCAAAGAACACTGTCTGACAGATAACAGGGGGTATTGGAGGGATCGTCA
AGTTCCTGCACCAAGTACTTCGTCGCCAGGAGGATCGTCTACGGCAGAAC
AACCGAATATAGGTAAGGCTATGAAATGGTGGAAAAGCCGAAATCTATCA
ACACGCAAATGATACGCCACCCACTTGCTATGTTCATTGTCACCACAGGG
TGCTCTGTGGAAAACAAAAGGCTGCCTTAGAAAAGTATGACTAAGTGCTA
GCTTATATAGGTCAACTTCAATTGCTGCACTGTTGGTTTATTCGTTCTCA
ACACGCAAAGCTAGATGGATTCATTCAATCATCCAGTCATTCATTAATCC
ATCCATGTAATGTTGAAAGCATGTGTTTTCTTTATTGCGTCTTTAGTTTT
GGTGTCACCTTACCCCTTTTAGCCAATTAAGTTCTATGTTTTGTTTTACA
GATGCGAGGAAGTAAGTAGCCGTAGGTGCTCCTCCTATGTTGGGAAGAAC
TTGGAGGGATTTGGCCCATGCTTTGCTAGTGTCCAGTTCTTCGCCGTCAT
CGATTCCTGTGCGTCGAAATGGACATGA Coding sequence (CDS) from alignment at Sc0000151:492333..498460- >Blg00253.0 ID=Blg00253.0|Name=Blg00253.0|organism=Branchiostoma lanceolatum|type=CDS|length=1287bp|location=Sequence derived from alignment at Sc0000151:492333..498460- (Branchiostoma lanceolatum) ATGCCCAGATCCGGCCCTCTGCGAAAGAGTGCTGGCTTTCTCCTACGAGG CGACGGAACGCACTGGCACTACCACCACGGTAGAGGAATTCATGCATCTG CAGGAAACACGGGAGGCAGTGATAAAGAGACGGAGGAAGAGAAGGCCCTG TGGTTTGGGGTTACAGTGGACTTCATGTCGGACGAAGAGAACGGGGAAGA AGACGGGAAACCACTGTGGCTGGTGAAGCCTGTGGCCTTTAGAAGTGCGG AGCTCTTCGCAGCGTTGTGCAGGCAAAGCTGGAGGCTGGGAGAAAATACC GGGCAACACACACGGCTCGTGTTAGAAAGGACGCCCAATAAAATGCCGGC AAGTATGAAAAAGGCAGAAAAGATCATCAAAGACCTCCTTCTTCCGACAA AAGAATACCACGTCTGTCAGAACGACTGTATGGTCCTCAGCGAGGAGCAC GCGGATCTGTCCCACTGCCCGGTGTGTGGATCTTCGAGGTACAAGGATGG TGGACGGGTTCCCCGGATAAAGTTCACCTACCTACCGCTCATCCCGCTGC TACGACAAACGTTCGAGATACCGGGAGTCGCAAAGGCACTGCAGTCCCAC TGGCCTCGACCGAGAGCAGATGACGGCGTCATGCGGGACATCCATGATTT GCCAGCCTGGGCTGAGGCTTATGAGCCTGGCGAGGCAACACCGGAAACCC GCGGCCGTCTACCCATGAAGACCAAAGACGAAATGTTGGGGTATGGAAAG ATCTATGACAAGTTGTCAACGCCTGCCCTCAGGAGCCTCATCGCCAAGGC TACTGGCAAAACCAGTGTAGAGGAGCTCTACAGACTGGAGTCACATACGC CAGAGAAGTACGCCCCGGAGTCAATGCATCTTGCAGGGGATGCCACCTGT AGATTTCGTGGGATGGTGAGTGGGGACACAGACACATTGAAAGTGCGAAA AGCCGAGCAGCAACTCAAGAGGTTCCCGAGCACCTGGCCTATCAACTCCG CGACAGCAAAGATACGACGAAAGTTGTTCGCAACGGATGCCGTGCACGGC CTATTGGGGAAAAAATGGAAATGCGAACCTTTCGAGATGTCGCAGCCACT GCATGAGGGCCTGGCCAAGTACCGCCTAGCCACCAACTCCACGTACACCG CGCTACTCAGATGCGAGGAAGTAAGTAGCCGTAGGTGCTCCTCCTATGTT GGGAAGAACTTGGAGGGATTTGGCCCATGCTTTGCTAGTGTCCAGTTCTT CGCCGTCATCGATTCCTGTGCGTCGAAATGGACATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00253.0-exon-Sc0000151-1570713199:498364..498460 | Blg00253.0-exon-Sc0000151-1570713199:498364..498460 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:497512..497747 | Blg00253.0-exon-Sc0000151-1570713199:497512..497747 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:495972..496196 | Blg00253.0-exon-Sc0000151-1570713199:495972..496196 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:495635..495758 | Blg00253.0-exon-Sc0000151-1570713199:495635..495758 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:494466..494671 | Blg00253.0-exon-Sc0000151-1570713199:494466..494671 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:494206..494343 | Blg00253.0-exon-Sc0000151-1570713199:494206..494343 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:493691..493721 | Blg00253.0-exon-Sc0000151-1570713199:493691..493721 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:493225..493327 | Blg00253.0-exon-Sc0000151-1570713199:493225..493327 | Branchiostoma lanceolatum | exon |
Blg00253.0-exon-Sc0000151-1570713199:492333..492459 | Blg00253.0-exon-Sc0000151-1570713199:492333..492459 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000151 | genome | Sc0000151:492333..498460 - |
Properties
Property Name | Value |
GeneID | Blg00253 |
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