TCONS_00057176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057176
Unique NameTCONS_00057176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1510

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057176 ID=TCONS_00057176|Name=TCONS_00057176|organism=Clytia hemisphaerica|type=transcript|length=1510bp
CTCACAGGCTGGgagAACAAGTGATAATGTGTGCCTATTAATTAGTGTGG
GAGATAGATTGCAAAAGAGCAGATTGGGAATGCGATCATCTATATCACGT
GACCAAGCTCAGCCAATCACATTGCAGGAAATCCTCCTTACTTTCAATCT
GCCAGTACGTTTGAACATGGATGAAATTTCTCTCGGTCACATTACAAACA
GTCGTGGTCAAAAGGTGGTGCATCTATATGTGGGGCGAAATATTGAACAA
CTAAATACGACTTCAGTTATGATCGACCTGACTACAATGCCAAGGATAAG
ACAATCACCAACGAAAGccgAAGAAAGTTTCACAATCAAATTAATCGAAG
ATTTCATCTCGAACAAACAACATTGTACCTCACTACACAATAATGATTTC
AAGATCcatttcaaattaaaattcaTAGAGAAGAAAGGAAGTCTCGCAAC
AACGTGTACAAAACAAAGACTTAACCTCGCAATTCAAAGGAGGATTTTTA
TTGGCTACAAACTCGTGTCTGTTCACATGAAATCACCAGATTGCTCCACC
ACAGTGTTCAATAAAACGCATGTGTTAATATCGGGAAAACATATCTCATG
TGGTTCCTCGATCGTCCGAAATACCACCCACGTGCAATATCAGAATGTCG
CCATCATGAAATATACATCGATGAGTCATCCGAGAGGTTATATTGTTGac
caaaaactgctgacgtgtGCACATTTACGGCACctgaagaaagaaaatgt
gTTAATGAATGTACCAGCCTCTGTTATCTTCCATGGACATAGAATGGGAC
TATTATTTCTGACATTCGCAAAATACTTGGACGCAACGTATACATCTAGA
TATTACGCGCGTGAATATCCCCTATTCTTAAAGGGCACATCGTTTATATT
TTTCGGAATCGATTTGTTTACACGAAAGAAGAGGTTGAAAGTCGTTCTGC
AAGATTGTTACTTTATACCCAAAGGAATGACACAGAAATTCTACTTTGTG
AAAAACAGATGTGGATCCAAGGATTTCTTCATGCATATCAAACAACGAAA
GAAGCTAAGATTCGCTTTCAACGCAAAACCACATCAACACCTGATATTCG
ACGGAGCTTTCTTTCGATGTCACACCACGATATGTGATACGCGGtctaaa
aaagaacaatgtcGTTTTGGTTGCCGTAAACCTGAATTACGGTTATGAGC
GAAAAGGTAGTCTATTTACGAGATGGAATGAATGTTTTACGACACTATGA
CACTGGTTTCGATAAGTATTGAAAGGAGCTGGAAGGAGTATGATATTCAT
TAACATTGTGTACGTGAAAAAGTGAAGAACAGAATTCATAGTGCAATAGA
AAGATGTCccatattttgaatgaaaatgattATCAAAACATTAAATCAAT
GATTTGGAATGAATTGACACTGGGATCTTTACTTGATATAAAAATGGTTG
GTAGATATGTTGTACTTTTACAACAAGACAACAAACACAGGAAAAGTTAT
TGATTCCTGG
Run BLAST on NCBI

transcript from alignment at scaffold_286:182398..200070+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057176 ID=TCONS_00057176|Name=TCONS_00057176|organism=Clytia hemisphaerica|type=transcript|length=17673bp|location=Sequence derived from alignment at scaffold_286:182398..200070+ (Clytia hemisphaerica)
CTCACAGGCTGGGTAAGACAATCGCCAAAGTATACATTGAGGCTCTAAAA
GCTGAAATCATAAATAAGATGTCGAGATGtgtcatttttgcattttttta
ggGTCAAAAAGTCACTCAATACACATACCTAGTACGGTAacctttttgta
aattttaaatcaaagatatttttacaaattataGGCTTTCTTTGACcgta
aattattttaaaagcaATAGTATTCTTGCCCGTTTATtgcaatttctttt
atttttcaggagAACAAGTGATAATGTGTGCCTATTAATTAGTGTGGGAG
GTTTGTTCAATGTATCTTTGTTTCTTACTATTTTTGTGCCTGTTTGcgtt
attgggcttttccaaaaaaaagatttacccccattgttgaggatattgat
ttttcgaagtatcaaacccctggatatccttctttattagtaaagacccc
ctgaaTATCCAcccttaaaaatatgctcaaccccctggatatcctctctt
ataatgatgcttacccctggatatcgtattttttacttgaaaagacactt
taccccctggatatccggtcccttgtagatatttaacccacTTTTGAACG
AAAANNNNNNNNNNNNNNNNNNNNNtcccttgtagatatttaacctccat
atatatccacttttgaacggAAATcactcaaccccctggatatccgatat
ccacggcacggactatttctagAAAAGCCCATTATAAGTGTCAAATAAAC
AGCCCCCtctgcttattaatttttcgatttttctaatccctggaccttat
taggaTCTCCCgtatattttcagctgtcaaaagaaATTATTCTGCTCTAA
ATTGCCTGGTTTAAGGCTATAATTATCTTAACTTTGGAGGTACTTGGTAA
AGTATCTAGCTACCCCCGGTATTTAGCTTCCCCGTTTATTCAAACTATCG
ATTTTTATACACCTGAGAGTATCCAGTAAAGCAAACgatacttttaataa
aattgtGATCATGCAAGAATGccaaaatgattgaaaaaaattaatatatt
tACTTGCGTCATTTAGATAGATTGCAAAAGAGCAGATTGGGAATGCGATC
ATCTATATCACGTGACCAAGCTCAGCCAATCACATTGCGCGAAATCCTCC
TTACTTTCAATCTGCCAGTAAGCACAAaccaaattgtttttatttttctc
agagTCAGAACAAGAAACATAGGAGAAATAAGGAAAAATTTCTAAAGTTG
ATCTTAACTGCTTCAAGAGGTCCGAAAATTGGACTATGTGTtatttattc
tcaacttcagttgagctacaatctgacaatgtctgtctgtctgtctgtct
gtcacaaaaactttagggcagcctggagacttcaaaaatgcttggatttg
actgaaatttggcacacttgttccttggttgaatatctgggggcggtttt
ttcattttttaaaaattttgattttttgggcctggggacgagttttcgcc
aaaacgaggctaaaactttggggcagcctggagacttcaaaaattgttcg
atttggctgaaattttgcacacttgttccttgggtgaatatctggcggcg
actttttcatttttcgaaaattttgatttttggggcctggagacgagttt
ttcgtcaaaacgaggccaaaactttggggcagcctggagacttcaaaaat
ggtcggatttggctgaaatttggcacacttgttccttgggtgaatatctg
gaggactttttttcattttttaaaaattttgattttttgggcctggggac
gagtttttcgccaaaacgaggccaaaactttggggcagcctggagacttc
aaaaatggtcggatttggctgaaaatttgcacacttgttccttgggtgaa
tatctggcggcggttttttcattttttaaaaattttgatttttggggcct
gggacgagtttttctccaaaacgaggctaaaaatttGGGGCaacctggag
acttcaaaaattgttcgatttggctgaaattttgcacacttgttccttgg
gtgattaTCTGAGGacgtatttcttttatttttcaaaaNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcaaaag
ttttgatttttggggcctggggacgagttttcgccaaaacgaggctaaaa
ctttgaggcagcctggagacttcaaaaattgttcgatttggctgaatttt
gcacacttgttccttgggtgaatatctggggttctaAAATTGGACCTATG
AATAGTTTGAAagcactgaagttgagcccagtgcgttgcgcacgttcgac
tattctGTACTAAACTTGGTAAAAAAGTGTTCCTAGAACGTTCTCCTTTT
GTATCCatgttttttttacaattttggaaaaGCATAACTTGTAAACGGAC
TTTTTTAACCCACTAAGCTCACTGACATCATGGATCGCTCGATATTTTTG
GTCCTGTACCGATATGTCTTGACCTTGGAGCACCACGCCGCCCTGTATTT
TCACCTTGTTCGAGATAAGAATCTTATATTTAGTTGCAGTTTGTACGttc
atttgaaatcaaaaaatataggGACTTCGAGgagggatgagctggagttt
ttacaagatacttcactaattggtcatttaaagtgatagagatgacgcat
tctttagaaaaagtaataagattcttttattacatcNtttctcgagattg
gcttggtatttgtttcttattttttgtatagtgatataaaatggtaatat
ttaatggtaatttgggtagaaaagtgcctaatgtttgttttttttgactt
ttttgactaattcgAGCTCTGATACCTacggtaatctattcaagctgctc
actacactttcttattcccttgctatttgtcctatttttttctgattttg
atcaacaggtaggtccattNctaacgaccaaccaaatcaaataagagctt
gtaaaaactctaaaaactccagcttggcCCTTCGAGGAGCCATACAGCCC
TATTTGTTTTCCTAAACAAAAACCAAGAAAATATAATCTATCAttctctt
tttggacctaccgcgggaggtcctttaatttgaccgttgtccgttcgtct
gttacaagcttttctcgggattggctcattatttttttttaattttttgc
ataatgATACAAANGTTGCTTGTTTATCTAGATTCTCTTGAAGATGGGAA
AGTCATCTATCGGAGAGATTTCAAACAGTAAAAACCATTCCATTTTGAAT
TTACAAGCTGGAAAGAATGTTCACCAACTTAATGCTACCTCCATTAAAAT
CGATTTATCTGCCGTGCCAAGGATAAGATACTCTATATATAAAGGTTGGT
AAACGTGATCGAATCTTCAGATGTTCAAATTTTGGTACACCTCCAGTCAT
ATATACAGTCAGTTTGACTCATcataatttcaaattattctaCTGGTGAC
CTGGGGGTGGGGGGGGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaattgcttc
attagtttttcctgatttttggcagaaagatagagtgcaaggtaccctaa
aatgtggctgaagtaatttttctcggaaattttttttcgtcgtaaaatac
ggatctTCGCAAGAttaggccaaaaactacctaaaaataagtttttttgg
acttggtgcaatattgcttcattagtttttcctgattttttggacaaaga
tgaagggcaaggttctctaaaacgtgactgaagtagtttttttcggaaaa
tttattttggtcgtaaaaatcggattttcttatttggggaaattcccttt
tgtcatatttagggaaaatgagcatttctcgagattggcttggtgTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNACTGGTGAGAATCTTTAAGGTCGCTTCAAAC
ATTACACATAAATTTCACAACAATTTCGTtttctttcatctttttcaaTA
CATATTATTGTTCAATGACTGAACACGAATAGTGTTCAAATGTCTATTTA
AATTAGAGGCTAATAGTCTATTCTAGTTTATCAGTCTCAATATTATGCCT
CATTTAGAACTATAgtattcactttttttcaattttagctgAAGAGAATT
TCACAATTAAATTAAACGAAGATTTTGTCTCAAACAAACAACATTGTACC
TCACTTAGAAAGAAAGATATAACCATTCCTTTTCTGCTAAAATTCCCTGG
TAAGTGAAACTCCAACTTCTCTACATTTGATTACCATACTTGGATTGAAT
TTATGCATTTTCCATAGCTTTTTGAACTGTTTTTTAACATTTGATATAAA
GGTGTGTGTCCTAATACTTGAATTGAAATTGTATTCCCCTTTATGCCTTT
TCCATAGCTTTTTCTGTACTCTtttcttacacccctgtctaaGTGACACA
GGATACGCCGGAATTGAATAAAGGTGTGTTCTAATCAATGATTTTTGACC
GGGGTAGAGAATTTCAAGAGAATTTAGTCGGGATTACTCGTTATCACACC
AGCTTAAAATTAGGCCTTTTCTGGACAATTTTTTTCACCAGGTTAGGGGT
GTTTCTAGGTTGATGTGAAAGGATGTACTATTTTCTGGCGCGTATATGGC
TGTTGTTTTAGTATTTGCCTTTTTGATTCATCTGGCTTCAGATGAACAGG
GGTGTTAaaatgcacgttttttataagaatgcccAAAATTTCAAAGCGTT
TGGATGTTCAATTTTACAGTTTCTAGCCTAAAATTGATCTCAAAATGCTc
tgattttcaacattttgtgagtattagTTGTAGGTTTGATTGGATgtccg
caaagccttagaatgttcttaacttgctcttaacattttacccatggaag
ccttatgttcttatatagtttgttctcaaattaaaaaaaagactttgatt
tattgtttagaacttaaagtttcatgccgcccgtatggacgacaatcatc
agctaataaaaatcgtttgaaaaatattcatatacAATGGCTTCTTCGTC
TGAAATTCTAACGTCAATTTTTAGGTGACGCCGAAGTTCatgagtaaatt
tttatttctgtGTCAACATTTTGTGACAATTTCAGTTCGTTTATTCAATA
AGTTTTTGCCTGGGTAATTGGCGAATTCAAATTTCTCGCACAAACAAAGT
TGACAGTTTTTTGCTTCAGGTGAGTATGCTTTCGCGTGTCTCACAACTCT
CCAAGTTACCGATGGCGTACCGTTTAGTGTGTGAAAGAAGTTTTATGTGT
CGAGTGtctatagtttgttctcataagaaatatacatcactataattttg
tttgcttttagAATCTGCATTCGGGAATGTGACTGGTTCGTTAACAAAAT
GGAAACCAATCATTATGAGAAAGGGGAAAACTGTAAGTGTGTTCGGTTCG
GTTCGGTTCATTGAGGaaacacgtttttataagagaaGTTAAATTTGGAT
AGCCTTCGgctgttcttaacatttttagttcaagcctaaaaaggttctta
acctgttcttattttcagtattttgtGAGTATTCTTGTGCAATTTACTTA
AACTGAGTGttctagagtccgcaaagctttAATATGGTCTTAACTTATCA
TTACCATTTATTGTTAGGCGGTtaattaatacaataatgaccagtTTTTT
ACGGTCTTTACTTGCCCTCACTAACCgttcattattgtattaaagtCAAA
CGCTTTTTTTGCCATCATTGTTTTATCACAGATTTATAAAATGTATAAAT
TTTCAACTGAGGATTGTTTGAATAAGACACATGAAACTGACAGTattgaa
acaataattttcattacttcAACTATAtgataaaatttataaatatatat
tgttgctattgttttaaatgcaaagcttctgattggtcaagcgctgaaat
tctattgtaatgtgacgtgacctaggtaggatttccttaCTAgatacggc
acacttttcagccaaagcacgacatctagcctatcgggctttataaatct
gtggttTTATCTAATACCTGTATTCATTTCTTTCGCCAGAAGGTCAACAG
ATATCGAGTTACTTGGGCAATCAAAAGAAATCCCAAGAGAATAAAATGTC
CAAACAAAACGTCTTTTGTCAAACTTGGAACCACTCTCATTCGAGATAAA
ACTCGAAATATATCAAGACCCTTGATGTTCAAAGTCACATATAGCTGCAA
GAAGAAATCCTCAATAGATTTAGGTGAATTGTCGGAAAAGAAGACATCCT
TGGTTGATTTCACTAAAAATAATCTACCATGGGCTGAGGTCAAACTGACG
AAAATTCAAAAAGGAAGATACAATCGACCACCTGTGGTTGCTAATGGTTA
CGAAGTAGTTGTTATTGAAGGTTGTAGAGGAACTGTGAAAATACCAGGTA
ATTCTACAATCACCTGCAAAAATTATGAGACATTTTGGCTCATTTGGGTT
CCCGCGCCCCCAATCAATGTTGCCTTGGTGGGACGTAATTTTGACTACGG
AAAATACTTGGATTCAACCAACATTACCTTAGGGGGGAGGGGAACTCACC
AGTCTCATGAATTTTTGCAGAAGATTGTAGGTAAATAGTCTGACAAAGTC
TCTTTGTACTATTTGTACTACACATTCTTATAcaagcaaccaggttgcta
agtAACTAAGGCTCAATTTTGCCAATTCCTTTTCACTATCTTCGTTaatt
aaaagctttttagacaATCTAACCATGGTTGTTATGGCAACCCTTgccca
ataagcataaatataatataatatcaAGGGGTgttcaaatatttcagaaa
atgaaCGCTAAGCAACCTAGAGACTGACCTGAAAATTGGAGTTGGTTATA
AAGAAATATGTGTACCCTCCATTCTACAGTTTTCCTACTGTCTTAACCCT
TAGAAGGCGAAAGGCGTATATATACGtcttgaaaaggtcattttaccgat
acacaatcttttggtcataactcctgaccacttgagattcagagaaaaaa
aatctgctattttttgtagctgagaaaaagagctttccaacgataccaaa
gctGATACCTGAATCATTTGTCCTGGTcaagaaattgcctttgaaagaat
aaatttcccgaaaaaaatgatgaactttttggcctttttcaaaaaagtta
gcggcTTGGAAAGGTCAAGATTGATCTTCTTCCATCTCATCTTCTCATTC
CTTATAAGGAATAACCAAACAAATCATCTCAAAATAAATATCAAGCCTTC
GTTTTCACTTTAATTTTTAGTATTTGACCCAGATGGAAACGAGATCAAGT
GTAAATTATTGAAAACAACTTTTGAATGTCGGTCAAAAGATTGTAATCAG
CTATCATACTTTATTGTGGATGAGGTAATCAATAATTTTGTTCTTTGAAG
TCATGATATCGAATTTCAAGTACATTTAGTCTTTTTCACCTTGAAGTTAA
AATACAACCGTTTTTAACGAATTCAAGGAAATTCGATTTGTCACCTTTAA
TCCAATTTTCGTTTGAACACTTTTATACGatttcctcaaattcgcgaaag
aaaaaaaattgtaaacttCGTGATTTCTCGACCTCGAAATTGTGATTTGA
AACTCAATcattctgtaattcgaacaaaaaacaATTAGCTTACCATAACT
CGAATCCGTCTATCattttataattgaaaaaaaagaaaatcttggttcat
taaagtttgaaaagtaaCAGTCTTTGGACATTTTAGATAAACTGCATGAT
AACATTTACTGGTGCTAAACCAAATGCATCGACCAATCACCATACAATGT
CAATGCATATTGAAGattttgaccaatcagaaaGCAGTATCACTGGCCTC
AGCCAATCATTAAGCCGCGTTCGTTTCGacatgaaaatcaaatttttatc
gAGGAAAACTACAGAATGCGGGAATAGGCCGAAGCTCATTCGGACTCCCT
TTGAAAACTGTCGATCTGTGAAAATTGGAGAAAGATTAAAGTTAAAGTTT
GGTGCAAAAGAAAATGCAGATGATTCAATGTAAGTGAGTCTGTAGATGAC
aaccaaaaatattaaaagactGGTCGGGGTAGGGAGGCACTCAAGGTATA
TGACATGCCACACGTGCGGCCATCAAGGGTACTTTTCCAAGCTTCCAACT
GTAAGGGTTGAAAAGAGCAAAGGTGAGAAAAGTTgtactctaagggtgta
aaatttagaaaatctgcgcagattttgactgaaaatggtcaaaaatattg
aaaacaatGCACCGTAAGGATCGATCTCAAATTTTCTctgtactgtaagg
gtccgatttcaaagcctaattttgggccgcacgtatggttgtttttgaat
cgagtgcccccccccccccgggcccggGGGTGtgtaagttaaaaaaaatt
tttttctttttttaaaaaaaatttttttctttttttaaaaaaaatttttt
tctttttttaaaaaaaatttttttttaaaaaaatttttttttttaaaaaa
ggggcccccccccccccgggtactGGCTAATGTAAGTTAAGAAACGTTAT
TCTCTAAAGCAATGTAAGAATTTCTTGAAAGTAAAAGATAGAATTATCAA
ACCGATTCATTTAACATATCttgtgtgagaaaaacatcatcagacaagta
aaatcaaacaaaatgcttattgTACCTTTATAACGACACGATATTTTTAA
GTTGTGAATACCTTAACAATATTTCTCAGAGAAGAGCTACTACTAAGATT
GAAAAAAACTGCTTATAAACCCTTTTTGTACCCTaaacaatggaaatttg
gaatgAAAACCTGCAGTCGATTGATTCTAAAGCTTTCGAACTCTATTTTG
GGGTAATTTAtggatgactttgattttccgtACCAACCCCTACAAACAAG
ATTTTCAAGAAGAGTTTTTCTAAACATACTCAGAATATTGGATGTTTTTT
AATCGTCACCACGTTTTTCATAGAATAGACATCAAGATCATCGGACANTT
TTTAATCGTCACCACGCTTTTCATAGAATAGACATCAATATCATCGGACA
CACGATACCATCCAAAAGGATCACGATTTCAAACCTTCTCCAAACATCCG
ATGGAGCTTCATACAAAACCTTCGAATGGAAAACAAGGGACAAAGGCTAT
CAATTCATTTGTTATTATGGCGCCTCACAGTCTGGGTAAGTAATCTATAA
AGAGGTTATTTTCTAAATCAGATATTCACGATATGTCTTGATCGCTTCCG
ACTTGGGTTGCAGACttattagacgatcctatcgtctacacaagatcact
aaaaaagggaatagtttaggagaggcgtgataaattcgggtggagtaatc
agtggcggagatgtttacagtgttccaaaactctaccgccacttttttcc
cgtaaaccgccctgttGCCCTAACtatttcccgcgtttactgactgTTTA
TTGTTTTCTCTCAGGATAACAAGTGCTACTTGGTGTTTGCTGATCAGTGT
AGGAGGTTTGTGATGCtcttttatttcatttcattttgcttaaaaagcta
GCGAGTGCCTCACCAAAAACTAAATGACCCAGGGGGATGTCGGATATGTG
CAAACCAGACCTATGAAAAGCGACCCAAagagaaataaatttttgcaaaa
aaattgaaccttagagagacgattttcgaaaagtttCCTAACCttagaga
gatttgaatttTCATGGATTTAATACACAGATACGCAAATACACAGCACC
TATTTAAGTCAGGGCTTAAcgaaaataaaaagtatatcaAAAGAATTCTA
CTCAACTCACCATAATTTGATTATATTTGTCTTTTAGAGCAATTGCAAAA
CAAAAGATTGGAAATGCGAACATCCATATCACGTGACAAAACTCAGCCAA
TCACATTGCAGGAAATCCTCCTTACTTTCAATCTGCCAGTAAGGAAATAT
GGATCATTTCTTGAACCAATCAAATGTGGATACATTTTAATatacatatt
tttatttttgctgaaagaaaaataacaaaaaaaaatttcctttttaagga
ttaattttcgcgaaattctAAATTGCGTTATTTTGCTTCAGCCAGGGACG
GGAGAAGCTCCATTTAGTGTTTGATATAAGGATTTGTTGGTTGACTTTTG
ATTGATTCTCATGGATGATATTTACATCTGTTAGAAATATTATTTAGGTA
CGTTTGAACATGGATGAAATTTCTCTCGGTCACATTACAAACAGTCGTGG
TCAAAAGGTGGTGCATCTATATGTGGGGCGAAATATTGAACAACTAAATA
CGACTTCAGTTATGATCGACCTGACTACAATGCCAAGGATAAGACAATCA
CCAACGAAAGGTACACTCGTTATGAACGTGTCATTTTTAggtttttcaaa
ctgtccgcaaggAATTGAATAGTTTAaaattgatgtatcaaaagttatga
ctgtttttataCGAAAAATTGGAATGAAGAATTGGtaaaaaagctatatt
tttaagattttgagagaaataagcttttagaaaaaatttcccaaaatcta
tttttagtttggtgaaagatacaccatctactacCCCTAATGTTTTTTCA
TCGCcgaaaataaacttttaaaactgaaaatacttttcttcgcaaaagtc
tttattttcttcttcatcaaattttttcattgcgatttttaaattttcag
tctcaaagatagttggcctaacagaaaatgtataacatgccaaagttttg
tgggctacatcaggcagaaatttgtattttgtatatggcactaaatatta
aaaattcactatggtcagagcccttaagagaactaatttttgtgAACAGC
TAATTTGCTTAAAAATTAACTTTGGGAAGGGAAAAATTTTCGTGAGGCag
cttttttttctctttttgtccTGAAAATGAATGTTAGGGTTTTTATATTG
GTAACAAAGAAATTCCATCAATCAAAAGCCACCTCCCAATATAaactaat
ttttctattttagccgAAGAAAGTTTCACAATCAAATTAATCGAAGATTT
CATCTCGAACAAACAACATTGTACCTCACTACACAATAATGATTTCAAGA
TCcatttcaaattaaaattcaTAGAGAAGAAAGGTATTTCAAATCATTTG
CTTTCTGCAGGATCAATAAATTCTCACTgtcattttttatataaactCAC
AAACAAGTTATACAGTgtgtttagaagaaaaaaagtgtaaGGAAATAATA
TAAatagatattcttataatgtATGCAAATTGTGTCGAAGTGTGCCATGT
CATATGgattaaaaaataacaaaaaactcATGaaacgattttttattttt
ctcgaaGCTGTTTGATTAAATCTTGTTTCTATTATCTAGTCCGATAACGC
AGATTATCTGGATTGCTTTGCAACCGCATTTTTTCCCGAACACGctgtaa
aatcttttttctctaGGAAGTCTCGCAACAACGTGTACAAAACAAAGACT
TAACCTCGCAATTCAAAGGAGGATTTTTATTGGCTACAAACTCGTGTCTG
TTCACATGAAATCACCAGATTGCTCCACCACAGTGTTCAATAAAACGCAT
GTGTTAATATCGGGAAAACATATCTCATGTGGTTCCTCGATCGTCCGAAA
TACCACCCACGTGCAATATCAGAATGTCGCCATCATGAAATATACATCNT
GTCCGAAATACGACCCACGTGCAATATCAGAATGTCGCCATTATGAAATA
TACATCGATGAGTCATCCGAGAGGTTATATTGTTGaccaaaaactgctga
cgtgtGCACATTTACGGCACctgaagaaagaaaatgtgTTAATGAATGTA
CCAGCCTCTGTTATCTTCCATGGACGTAAGTTTTTAGTGGCGGGGAGGGT
GGGAGTAAAGCTCACCAGGCTGGGTATTAAAGAGCCAAcataaatacagt
tgacgttctctaattcgataatatttaaagtcaccgtcaacaagaaattc
TCATAAATGACGCTcttactattcgatacgctcccttattcgataatatt
gaaagtcaccgtcaacaagaaactctcataaacgacgctctactatttga
taagctcccttttttgattaaaattcaattccccttgaaaatcgaatttg
agagcgtcaactgtaatgcATTTTGTAGATCTCTTTTTGCAGAATGTAGA
ATTAAGTTAAGAATAACTCCAAATTTCACTCCAAAGTCAGAAAGATGTCA
CATGGGGTTGATACgttaaaaaagatattaaagaagaacattttaagaac
taAAATTCAGAAGAGTCGATTCTTATTAATGTTTTAGAAAGAAAgcgtga
aaatttttataacattttcgtaactttcttctcttttctctCATACATAG
ATAGAATGGGACTATTATTTCTGACATTCGCAAAATACTTGGACGCAACG
TATACATCTAGATATTACGCGCGTGAATATCCCCTATTCTTAAAGGGCAC
ATCGTTTATATTTTTCGGAATCGATTTGTTTACACGAAAGAAGAGGTTGA
AAGTCGTTCTGCAAGATTGTTACTTTATACCCAAAGGAATGACACAGAAA
TTCTACTTTGTGAAAAACAGGTacgtaaaaaaaaacttttcttcgtCTTT
TTTTTNTTCTACTTTGTGAAAAACAGGTACgtaaaacaaaacttttcttc
gtctttttttttgtaacaaCAGATAAAAAGAGAATAGATTTTGGCAAGGA
ATAAATTTGATGGACCAAATCCTCGGCTATTGATATGCTTAGATCAATAA
TATTctcaaattaattttcattcagaCCCTAAGCAAACAGATAGTCTGAc
ggcattgagtttaaagcccctaAGGGGCTAGACAGGAAACTCTTGAATGA
GAAATGAAGCGAGggattgaaattaaaatctaaCGCCGGGTTTGGAAAAG
TGCATCGTGTGAAAACAAAGCTCAGTTTCGGGCTAGGGCGCGAAATTACG
GTTAGTGGCGGTAGACAGGAGAACGCCCTCGGCACCAGTAGTCCCGCCTG
ACCGCGCTATTAGGACCCAGTCTTCCATGCCTCTTCCTTCCTCGTTCACG
ACTACACAGTGAAGTGTTCTTTTGAACCTcgtgttttttaaagtttttcg
aAAGATGGGTTCAATCTGTCATCCTAAAATAAGCGCAAATCtcaaggctt
cacttttttggacctaccccggtggggtggaggtcctataaattaacctt
tgtccgttcgtccgttcgttattagctttcctcgagATTgcctctttgat
tctttatgattttttgcacaaagatgcataactataaaccctcgaatgag
ACGGAGcctgactttcaaaaaaaaaaattttggggcaaatttgggccaaa
aacggctaaagaacgggttttttggactttgtgaaaaattgaatcattaa
ctttttgcatgaaagtagtagtagaggccactatgtcttcccgtgtgcag
cagcttgtgcaaagggattttatgattgaatattgttccttgaatgtaga
agatcaaaatttgagaggtggggccgggtgtgactATCCGTTGCcttgga
aactgacgtcattggttactatggcaacaaaaataaaaagtcgtcaaaat
tgaaatttttttgcttcaatcgaaagagcatgaaaaactgataaagaaaa
agatcacaacctgtatctgaaaatgaatatattaggagatataaaagaaa
taaggcaaaatgacgtcataaaaacgatgacgtcatcgaaaaataaaaat
ttggcaaaatttgaaaatttttggttttttgaaaagaagaccctccagtg
aacataaaatattattacgaaaacgtttgaaaattcgttaaaaaaagtct
attggtCAAAATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAAAAAGtctattggtcaaaattgacaatttcattttttg
cctgtcgaaggttggagcttgcccaagcacattacaggcaaaatttaaaa
atatcaatttttggtCATAGAActcttaaaaaggattttcagactttttc
gtaataatattttttgtttactggaaagtattctttccaaaaaaacaaaa
ttttttgaattttggtaaatttttatttttcgatgacgtcatcgttttat
gacgtcattttgccttatttccttaatatctcctgatatattcattttca
gatacaCGTTCCTGCACACGGGAActatagggtaccatcataggtaaaag
atggctcaagtagactttttcaaaaaaattttgttggctcaaaaaacgca
tgtttatctataagaatcactattgataagcatacatcaatgttcttagc
caaattactcaattttttgatgagatagatgtttttttgctcaaaaagtc
ttgaatatgaagaatatttcaagatcatgaaattttggttttgaaacgtt
tttttataagaaacaaacgactaattttaatagatcgtcactatttgtgt
tctgaatgattgtttaatggtcacgctcacgtagatatcaattatatatg
tgttaaatgcataactaggtaggtccataaaagtatcctCTCTAGTCTTC
GGCTTTTAGCTCAAcgtctacacgcttttttataagaatacaatttataa
gaatgtctatgatgaaaatggccaaaaaactaagaatatgctaagaatat
taccatcatggaattttgctactaaagctaagaatgccattttaagagca
ttttcaattataaattaccaattatccccaagttaggctcactgctttta
caaaagtgccattttatgcttgagacgtatgtactaaatgttaaatctat
tatgaattaggatcctaacccaagaatgtgctgtaagaatattttaggat
gattttcccaaaaacgttaagaatatttatgatgaaatgaatttacacca
tttttataaaaaaaatcgtgtatGGGATGAAAAACTAATGTGACTATTAT
TTTAATCTCTGTCACCTTCAGATGTGGATCCAAGGATTTCTTCATGCATA
TCAAACAACGAAAGAAGCTAAGATTCGCTTTCAACGCAAAACCACATCAA
CACCTGATATTCGACGGAGCTTTCTTTCGATGTCACACCACGATATGTGA
TACGCGGtctaaaaaagaacaatgtcGTTTTGGTTGCCGTAAACCTGAAT
TACGGTTATGAGCGAAAAGGTAGTCTATTTACGAGATGGAATGAATGTTT
TACGACACTATGACACTGGTTTCGATAAGTATTGAAAGGAGCTGGAAGGA
GTATGATATTCATTAACATTGTGTACGTGAAAAAGTGAAGAACAGAATTC
ATAGTGCAATAGAAAGATGTCccatattttgaatgaaaatgattATCAAA
ACATTAAATCAATGATTTGGAATGAATTGACACTGGGATCTTTACTTGAT
ATAAAAATGGTTGGTAGATATGTTGTACTTTTACAACAAGACAACAAACA
CAGGAAAAGTTATTGATTCCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036030XLOC_036030Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057176-exon-scaffold_286-1491911889:182398..182409TCONS_00057176-exon-scaffold_286-1491911889:182398..182409Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:182398..182409TCONS_00057176-exon-scaffold_286-1510915933:182398..182409Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:182398..182409TCONS_00057176-exon-scaffold_286-1575043694:182398..182409Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:182657..182697TCONS_00057176-exon-scaffold_286-1491911889:182657..182697Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:182657..182697TCONS_00057176-exon-scaffold_286-1510915933:182657..182697Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:182657..182697TCONS_00057176-exon-scaffold_286-1575043694:182657..182697Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:183464..183530TCONS_00057176-exon-scaffold_286-1491911889:183464..183530Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:183464..183530TCONS_00057176-exon-scaffold_286-1510915933:183464..183530Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:183464..183530TCONS_00057176-exon-scaffold_286-1575043694:183464..183530Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:194352..194385TCONS_00057176-exon-scaffold_286-1491911889:194352..194385Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:194352..194385TCONS_00057176-exon-scaffold_286-1510915933:194352..194385Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:194352..194385TCONS_00057176-exon-scaffold_286-1575043694:194352..194385Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:194645..194807TCONS_00057176-exon-scaffold_286-1491911889:194645..194807Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:194645..194807TCONS_00057176-exon-scaffold_286-1510915933:194645..194807Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:194645..194807TCONS_00057176-exon-scaffold_286-1575043694:194645..194807Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:195461..195580TCONS_00057176-exon-scaffold_286-1491911889:195461..195580Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:195461..195580TCONS_00057176-exon-scaffold_286-1510915933:195461..195580Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:195461..195580TCONS_00057176-exon-scaffold_286-1575043694:195461..195580Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:195914..196142TCONS_00057176-exon-scaffold_286-1491911889:195914..196142Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:195914..196142TCONS_00057176-exon-scaffold_286-1510915933:195914..196142Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:195914..196142TCONS_00057176-exon-scaffold_286-1575043694:195914..196142Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:196201..196322TCONS_00057176-exon-scaffold_286-1491911889:196201..196322Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:196201..196322TCONS_00057176-exon-scaffold_286-1510915933:196201..196322Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:196201..196322TCONS_00057176-exon-scaffold_286-1575043694:196201..196322Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:196848..197067TCONS_00057176-exon-scaffold_286-1491911889:196848..197067Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:196848..197067TCONS_00057176-exon-scaffold_286-1510915933:196848..197067Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:196848..197067TCONS_00057176-exon-scaffold_286-1575043694:196848..197067Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1491911889:199569..200070TCONS_00057176-exon-scaffold_286-1491911889:199569..200070Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1510915933:199569..200070TCONS_00057176-exon-scaffold_286-1510915933:199569..200070Clytia hemisphaericaexon
TCONS_00057176-exon-scaffold_286-1575043694:199569..200070TCONS_00057176-exon-scaffold_286-1575043694:199569..200070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:182398..200070 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.357185	0.485677	0.15111	0.0401685	0.131208	0.198318	0.341022	0	0.511826	0.135241	0.0120445	0.226498	0.300018	0.385872	0.402777	0.342738	0.920816	1.23395	0.1105	0.785898	0.723131	0.68157	1.03772	1.32531	0.0401164	0	0.242536	0.653101	0.19946	0.490122
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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