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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057173 ID=TCONS_00057173|Name=TCONS_00057173|organism=Clytia hemisphaerica|type=transcript|length=792bp
TTTGTCGGGAGTTAAAATCCAAAGTAAAAGCCCTAGAAAACTTAAATCGT
GACGTTTTGTGTCTGATTTTGGTATTCAGGTTTTCTCCCAGGATAAAAAA
ACCGTATTTCGGTGCGGGAGCAAGCGAAAGTGCACTGTTTTCAGTCAGAT
TTTACTCGGGGAAGTCAGGCATTTGTTGGAACCATCATGGCACTTTCATT
CTCACGAAGACTTTTAAAAGTTAACAATCTCCGTGCCATCCAAACTGTTG
TACAATCTAGAAACTATGCTGAAGCATCTGGATCTGCTTTAAACCTTACT
TTTGGCACTCCAACACAGGCTTACTTCAATGAAGAACCAGTCACGCAAGT
CGATGTTCCATCAGGTTCCGGCAACTTCAGTATCTTAGCCCAACACGTGC
CAATCATTGCTGCCCTTCGACCTGGTCTTATGACTGTTTTCAGTGAAGGA
AACGCACAAAAGTTTTTCGTCAGTAGCGGCACCATCACCGTCAACAGCGA
CTCCAGTGCACAAATCTTGGCTGAAGAAGCCCAACCCATCGAAAACTTTG
ACGCTGATGCCGCCCGACGAACCGCCGATGCCGCGCGGACTGCTTTGGCC
AGTGCAGCGGACGAAGCTGGTAAAGCCGAAGCACAAATTCAACTAGATAC
TTGTGAAGCTTTACTAAACGCTTTAGAAGGAAAATAAATAAGCAGCAATG
AATGATCCTTGGTGGAATGTTCTagtttaaaatataaattttaatttgtt
ttttgaaaaaaaaaatacaaaagcataatatcaaaatcaaac Run BLAST on NCBI transcript from alignment at scaffold_286:126837..142238+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057173 ID=TCONS_00057173|Name=TCONS_00057173|organism=Clytia hemisphaerica|type=transcript|length=15402bp|location=Sequence derived from alignment at scaffold_286:126837..142238+ (Clytia hemisphaerica)
TTTGTCGGGAGTTAAAATCCAAAGTAAAAGCCCTAGAAAACTTAAATCGT
GACGTTTTGTGTCTGATTTTGGTATTCAGGTTTTCTCCCAGGATAAAAAA
ACCGTATTTCGGTGCGGGAGCAAGCGAAAGTGCACTGTTTTCAGTCAGAT
TTTACTCGGGGAAGTCAGGCATTTGTTGGAACCATCATGGCACTTTCATT
CTCACGAAGACTTTTAAAAGTTAACAATCTCCGTGCCATCCAAACTGTTG
TACAATCTAGAAACTATGCTGAAGCATCTGGATCTGCTTTAAACCTTACT
TTTGGCACTCCAACACAGGTATCAATTTTTTATAAACCAGCTTCagataa
caaaaaattatttaaaaagatTACCTAAGCGATGTTAATCGAATAATCGA
ACTAATCCAATGATAACTGTTTGATTAGCAAACCAAATCGAAATTGGGAA
ATTCGTTTGACTAGTTTGATTCATTTTCAACATGTTGGTTTTATGATATT
TGCTTGTATCTTCCCATTATCGCAGCGCTTAATTCTGTGGGCTTCTGCTA
ATCTAATTGTAGCAGTTTGGTCATTTTTTCAAGCTACTTTAAAACTTTGT
GTAATGTTGACATGCCGTGAAATCGGGTACCAACTTGCATCACTGCACTG
CCACTGGGTCTGGGCAGGGTCTGGGAGGGAAACATGCATAGCGATGGGTG
TTTAAAATTAATTTACTTGTCTGGTCATCAAatggaaaattaaaaagaac
ATGTAATGAATCAAGGAAAGATTATCATAATCCAGACAGGTCGTAATCaa
taaaatcgatagctaatGGGCCATCCCAGAAAATGTTTGTTACCCCACAC
AAGTGTtgcgcgtaagccaaatcgtgtattacgaacaacctctaaattgc
cgagtacaggagaaaaaaaatggaaattcaaaatggcggctaAGCCCatg
ctgataactatcaaaaatctttgtatttcaatcagctattgcagctcaat
aaatcaatgaaataatttgaaataaaaagtaaacaaaccttgaacctttc
aggAATGGTTGTGCTTTCTTCACAAAGActaaagacagatctggacttat
tttgtactttccagcagttacatcaaaatgcctcgaaaatgtcaatatga
aaattgcataatcagagaacgtatgtcttgctcattataaaaaaactgag
acaaactttcaataattggattgtaacatcgagttaagtctcttttgtta
agtcaccaggggttaaataaaacagaccttgatacatttattgtTTGTTT
CAACTCGACGATTAgcttaaaactcagcctcctaaatatttggggtaggt
aaaatatgtacaaagaaattcacacttttccaacccggcaaatctttaaa
aaagaagcgaacaataaaatataattaccctttccaaataaacctcttcg
gtgacgagcgtagtctactctgacgtaattgtaaaatttatgtgatggga
gtttgacatatgCTTGTACTCTCTGTGTATTTACATTTgttgtaatgtaa
tgttgtttggggaattatgaagttctctggaatttcgattgcatttattc
aggttgattttctATGatttctaatggtactttttctaacgagtttgatt
actctgttctcacacttatgtcttttttttcgcgtccttttccgtgatta
cttttatttgtatttttaaagataggtaagaaggcatattgatgtaactg
tccagtctcttgttcgtagtttttctgactttctggttctttgtgagtta
ttttctatgttttctaacttactgaatgacttaccgacagatcgccatcG
GTGGGATTCAAACCCACTAAATACAAAGTTCCGATGATTTGAAACccatt
gccttatccactgcaccacggattcatgccaggatagtgtttctgacggc
tatttatattgtacaaactgcagaccagactgtattaagagaaaatcaca
aaagagtgcttgtttcgagctccaaccctaaccctaaNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCATatccaaccctaccag
gtcgcctgcaggtcctgacactattcccgcatacctgatccgaaaaatag
atacatgtctttcgtctttatgaggaatccaaataaataaaagtattcat
ccaaagtgaagattacatttcaaaataaacgatttccaaaccaacctaaa
gtcagtgtctgccaactaaaaatttctctgcggggcaaggagttacgact
tccaactttaaacaaacttcaaaataaaattgtaatGATCTTGTtgctta
aaatatcacttacttacataatatatttatgatataacacccttTTCTTA
AATAAATAACCTGttaacagttacatcaatatgccttcttactgTACagg
tctttaaaaatataaacaaaagtaATCACAGAAAAGAAcacaaaaaaaag
acataagtgtgagaacagagtaatcaaactcgttagaaaaagtaccatta
gaagtcataaaaaatcaacctgaataaatgcaatcgaaattccagagaac
ttcataattccccaaacaacattacattacaatGAATGTAAATACACAGA
GAGTACAAGcatatgtcaaactcccatgacataaattttacaattacgtc
agagtagactacgctcgccaccgaagaggtttatttggaaagggtaatta
tattttattgttcgcttcttttttaaagattcgccgggttggaaaagtat
gaatttctttgtacatattttacctacccaaatatttaggaggctgagtt
ttaaacgaatcgtcaagttgaaacgataaatgtatcaaggtctgttttat
ttaccccctggtgacttaacaaagagacttaactcgatgttagaatccaa
ttattgaaagtttgtctcggcctttttataatgagcgagacatacgttct
ctgattatgcaattttcatattgacattttcgaggcattttgatgtaact
ggttaaagtcttttatgtttgccgcaagaagggagaaaaatttaatttca
cccccggttttttctctctttttctagcaaTTTCCcacgtgttagtgtag
acacaactttaatccggggaaatgaagctttttcattggtctaaaatcac
ggatggtcacgtgactagaatttttatccagggaaatgccgtggtggcaa
tgttttgctttagtgagattgaccattttgttgttttgatttgagcgggc
aaaatttctatacaaaccaaaatatggctttgttggaataccggttgaaa
cacttgtgccCAGTTTGGTGGGGTacagaggcagggtactaacccatagg
gtactacaggcatcgaaataagggatagaaaTTGCAtcacaattttttga
taagcatgattttgcatcctaaaatggatctcaattttcaatttttaggt
tataagtaatccaaaaacgcatcgcgaattgcgaaatttctcaaaagagt
aaaaaaaatttgtcgattaaaaagatttcaaatcaaaaaaattaatattt
gaaaaaagtcaaaatattacaacaaactactttttttattgaaaaacagc
aaaattatgtgaaaaagtacccaaatagtatcctgtacttgcttgaagag
tgaaaaatacacatCCCCACCCCCAAGGTAGTACCGTGTACTAACTTTta
tgaaatgcaaaaatagacaccaccaccctggCTATGGGTCAATACCCTGT
GTCTGTACTCCCCCCAGGTTACCCCCCCGTCAGACGATGACTTCGTCGAT
GTGCTttttttttctagcctcggaaataacTTTTCTGAAAATTCATGAAT
TCTTGCAAAATGCAtcagaaattccactcttttttgccttttttaattca
attaaaATCTATAATCAATAGCTAATCAATATTTGTCCTCAATTAGCTAT
CAATTGCTATCAATTacagtactcttaggtgccaaataaacagccccccc
ccccgcttgttaattttccaaaaattttccaacccctctttatttgaacc
ccccccccccgttttttaatttttaaaaaattttcccccccccctttttt
ttacccccccccccccgtttatttggcacctaagagtttTAATCGATTGG
TGTTTTGTATTGGTATTACAGTATCAAAATTAATCGATGGTTAaataaga
gccagttttttaaggggcagttccaatagtttgaaacatagatttttgtc
attttttgatattttttttaagtaaaacGAACTCTGAcaaactgagtaaa
atcccaaaatattttggtctgaaaattcATAATGCCGGATTTgtgccaat
ttgaagtttttgacatttttggcattgcacttaaaaagttttttgatata
gaaccatgctttctcaaatcaaaatgaggatatggtttttggtgattctg
aaactatggccGGTAAActatataattttcaaaaaaaatcaaaattttga
aaatggtagctggagttatgacatacattctgataaataacaagattgct
cacgggaatttctaaTCCGCGCAAGTAAACCCGCATCTGTCAATCATCTT
TTaaacctgtcaatcattttttagaagcattttctgtcagttttgctttt
cttttcacttatggttctgaaaaaagtgtttgtaagataaaaaaagacga
aagcatagggtcctccagggttcaggtacccccaaaaAATTAAGGTACCC
CCAATCATTTTGGTACCcctaaaatttttagaattctaaagtaacccccc
ccccaactttgagttacccctttttcaattttttttattattgaaaatac
aaaaaggaattttttgctcttttgtcattcctgggAGAATACTTCCATAG
CGGCCAGCacttctttttcaacaaataGAAGGGTGTCATTTTGACTATAA
TTTTCCAGGGTTTCAAGAGATTTTTATATACCAAACTTTCAAGGGTTTCT
AGGGCTTTTAGTTGATCTTTGctagttttcaaagatttcaaggaAATCTG
TCGACAAAAGGaaaaaggttgaattttcaatttttgtgtaaAGGAGGGCC
CTTAAATTGGCTGATAATTgtaattgataattttacaaCCACCCATTCTA
TCACCCAGACCTGCCAACCTCATATAATTccagtggcacttaaagggtta
aaaggtAAACCCCCTAAGAATGAGCGTGGAATACCCCCTTGAGTCTCAGG
GGTTCCAAAagtatgttttctcatttttaagtcACTGCNAACTACGGTGT
TTGTATCCCAcgcaatgggaaaaattttgtatttctgaaagttaaaatgg
ctgaaaatggccACAAAATTTGGTATTTCAAGGGTATAAATAAATCTTGC
ATTTCAAAGGTCCCCAAAATAATATTGacttttcaagggtgtttcaaggg
tttcaaggaattTAAGGGTGATgacttcatacaaaaacaacaacccCTGC
CCCCACTAATGAAAAtgcaggtacccccaaacatatcaggtTCCCTctaa
atttaagaatacttccaggtacctggcttttttaacactttttttttagg
tacccccaaatctCTGGGGGGGCTGGATCCTATGCTTGAGGTGTAGATAA
ATTATTTACAATGATTAACAATaccatattttatttttatttgccatgac
ctgtataattttatttaccaTATCAAGGCATTAACttcttaaacaaatga
ttttagatcaTTTCCAACATGCGGGAGCCGATCACTCATCGAGATTTTCA
GGACTCTTTAGTTGAAGAGTGACTCTTCTTGATCGTCTTGACTCTTATTC
CAATTCTGTAAGGGGACTGTAGCAAACATGCTGTAAACCCTGCTAGTGCC
TATAGAATTAAACacaattaaacaaaaaatccccatgagcaatctcgtta
tttatcaaaaagtatgACATtacaaaaacactacaaatttgattttaggg
gtattttagagccatctgacctgtCCCAAGGGAGTTtgttcctgctcaaa
ataataatttctgTTAGTTCAGTCCCTGGTCTATCCATTTTTAAAGTTAT
TGCAATAAAAGTTCCGGCCCTACTGGCCCGTAGAGGCTCAAAAAGCCAAT
TAGGTCTCgaaaaagtaccaactttagcccaattttcctagaaataaCAA
CATTGTCTGGCCTCCAACTCTTCTGTTCCTGAAAGACAACTTCCTGGTCT
CCTAGgatcaaaagaaaaacctaaGTAACCTCCTACCTTTAATTTTaatc
ttgatttaaaaaaaataatttaaatcgttcgaaaaatgactaaaatttgg
gatattttggcccattggcTAACTTCAAACgggtctaggtcactgaattt
tttattatgtaagggctatgatgaatctcttatataaaaacaataaacta
agtgaaaaaagttgtcaaatgtgcttttttgggccaaaaagtctttttct
tcaatttttagaCTAGAGCCCAAAACGAGTACCCATTGAtacttgattct
tgattttgtgaaagcatcctatagataGTGTAAAAATTTATCAGAAGTTT
TCAGTAACCTTTTTCGttcttttaaagattagggCTAGCTCAAAGTCTGT
CTTAACTTTATAATCCTAAAAATCTCAACAAATCtgctcaaaacaacaat
ttctGGTCAAGATTGGACAGAAAATGAGCCCTCAAAGACAATGAAAATCT
TAGTTTTTAGAAAGTTTCATGGGGATAGTACAAACTttcatcaagatctt
tacctCCTGAACTACCATTTAAGGATCAAGTGTGTCAACTAAACTCTCAA
ATCTTTAAAAGTGAACTTTACAAACtccaaaaaacaattttgccaTTTAC
CTGCTTGCTCTTAAATGCAGTTAAATGAGCCCAAAGTTCAAATTATCCAA
ATAGAAGGAAAGGTTTAggaatattttgtacttttggacttatctcgaaa
tatttttaatgGTAGAAAGTTCAAGAAGATTCAATGTTTCGATTACGAAA
ATCAAGTcaatactgtaagttggtctagtGTCCAAATCCCTCTTCAAATT
TCAACACCCTTCTTTTCAGAGATGGGAATAATAGTTCTATTTCTATTGGC
AGTCTAGACTGAGCACTTTTTAGctcaatattttgtaaaaaaaatgccgt
atgaacaaaagaaaatagtcaTAGATCAAAGAAATTTACTGTTAGCCTCA
ATTGCAATTGATAGCAAGTTGTGGAGAGGctttgaaagtttgtaaataca
tgttgttttttttataagcatacaaaaatccgaaaacaggctcagagatg
cttaggtcgaaagcttaatgaggctgaaaaatgcttgaggggatgcttaa
atctaaagcataaatttagggaaatactgaaaatccgcataattccagcc
aaaaatagccaaaatcaggaaaaaaatatttgttgtcAAGCAATGCTTCC
CATATGCTTTTTTTCCCCATATCtaagcctagatatgcttataagtgcaa
tgcttataaaagaaaaaaacatgtttgCGTGGTGGGTGCcctccttaaaa
atgaaaaagaaggaaTCAGTGGCTCCCAGGCTGGGGTCCCTCTAGATTAG
AATCGATATAATTCCAGATTTGCTTGCAATTGgtagaaatttgaaattta
gacAGAATGTAGTTTTTTATGCTCTTCAAAGCCAAAGgataaaagacaaa
aaagacaacaaagccattttaaaaactttggtCACAAATCCCCATGCTTA
AGTTTTGACCTTATCCTTTTTTTCAAAGCCACAATTTTTTCCTGACAAAT
TATATTATATCATGTTTTTTGATATTCATTTGTTTCCATTAAATCTCATG
AAATTGACCTTCAGAACGTAAAAATTGTAGCTTTTCTGGTGATGTGAAAG
ATGGAGAAAAAAGTTTACAGTAGCCTGATGGTGTGATAAGTTTTTTGTGA
TAAaaagaaataatcaatgatgaatttaagATAACATCATACTTTTcttt
gaaattaaattataCATTATTCTGAATTTTCTTAATAATCATCCAGTAAA
tactaaaaatttcaaaaaaaaataaaatcatgaaaaaaataaaaatacaa
ttaAAACTACATTGTAGTTGCCAATATTTCTATTGATTGGGCAAAGTTTT
ATTTCCAATTTCttctcgcaaaaatttcttcccttaaggtattaacAAAA
GACACCTTTTGAGTTGTTTGAAAACCTGACATAAGGGGTTGGTTATATTT
TATCGTTATAGAATTTCCTATTTCCATCTTCATGTGTTTGAATTATGCCC
AATAGATATTTACGCTTGTTTCCTATGACAATatttaaaacactttaaaa
ttaaaatataaattgcaaaaataaatGGGAAGCACATGATAACCATTTCA
AAAGCCAGTAGAAATTTCCCAAGCACAAAGGATGCACCCTTTCCAATTAG
ATTTGAATCATTGCAGTATGCCCAGAACAAGTTGACCATTGCTAAGAGAA
TCAAAACTAACATTGATGTGATTTGCGTaaagttcaatttctttttgtta
aatGGCTTTGCAATATAATCATGGATTGTAAACAATACTAAAAGTAAACT
GGTGACATAAAGTTTGGGCATTTGTGGTATTATGAAGGTAGTGACAGCCG
CTAAAATCAGTCTCCGTGCAATTAGAACAGGTTCCCACATAAGCTGAAAA
CCATCTTTATTCTCGTGGAAGGGTTCATTCAGGATGGACAACATATGTGC
TGCATCATCCAAATTTTCTGGTTTTAAATCGATGTAATTTGACTGACATA
AACAAGGCCGCATAACTAGATAGTAGACTGAAGATACTGGTATAGTTAAC
ATAAACAGGAACTCATTGGGTGTAATTTTGTGTACACGAAGTTTACGACA
TCCAAAATATAAAACAAGGGGAAACGGTATGATCCATAAGCAGATGATGC
CAAGAATAACTTTTTGCATGGGTTGAAAACATTTCACAGATGCTTGTGTG
TATAAATAATTCTCTCCATCAATTACAATGCAGTTGACAGTATGAAAACA
AAATACTGCTATACTCATATATCCAAGTAGCAAAAGGTTAACATAGGCTC
CTTTTAGACGTCTCTGAAAACTAGTACGGAATTGAGCGAAGAGGAGAAGT
AACAATGCTACTTGTGAAATTAGGGGTAAACTAGATTTAATCAACTCGAT
TATAATTGGATTTGATGTATTGAGTGGGCATATGTTGAATTTACTAGCGT
CACTTGTTATGTCGATTCTGATATTGAAGAAAGATATGATTATGCTTATA
AAATGTGGCACATGGTAGGCTTCTTTTGCGGACGAAACAATTCTTAAAAT
GGATGCTGTCTGGTAGAAGAAAAACGTTATTTTGATAATGCCGGAAAAGG
AACTAGATGTCTGCTGTTGTTGTAAAATTGCAGTGTTTTCATCTTGTAAT
AACAAGTATGGATGTTCGTTCTCAGTTGATGTTGTCTCTTCATTTTGGCT
ATTTTCTCTCCTTGTTTTTTTACGCGTTGCTAGATTCTTCAAAAACTTCC
ACAAATCAGTGCTGTAAAGCAGGAAAAGACATATGAGCAAAACACTCATA
CAATATCCCAGTATAAATAATCCTTGTGAATCGCATTGCCTAAATCTTAC
ACATCTGTTTTGGCTGAATATTGAAATAGCGTGATTTTCCAAGCAATCTC
CGCATAATCTGCCCTTACGTCCCTCCTGGCATGTATCAAAGGAGTGACAT
TTATTGAGATTAGGGCAGCAATAGTTTGGTGGGCAAAGGTAAAAATCTAC
ATAACCTTCCAAGTTGGATTTCCCCCAATAGTTTCCATTGCTGCGGATAC
TACCAACACAATAAGCCTGATATGGGCATTTAAAGCATTCTACTTTGTGT
GTTTTCGAAATATTCTTTGTATCATCCCATAAGATTGAGGATTTATCAAG
AGCATTGTATCTAGTTTCTCTACAGCTTTTGCAACTGATTTTTAGATAAG
TGTCAAATGACCTTCTTGGTGACTCTAGAATTTCTAGATTTTGTCCTTTC
TGACAAGTTATATTCATTTTCTGTAATGTTATGTTTGATGGAAATTGAAG
AGGTACTACAATAACAGGGATATCTTCAATTGAATTCTGCCAATGTTCGC
TGTATATCTCTGTTTTAATCATCTCAAAACCAAACTGCTCCATAGGACGA
GCGTATATTGAACTCACTTGGTTACTGGATACTGAATTCCCACGAAAACT
ACAGTCTACAATATTAAGCTTACCAGCAAAAGATGTTACTCCAGCTGATA
TCTCCCTGATCATTGAATATATACCAGCCATCATCGTGTTGTTGTTGAAT
GTGGAGTTCGTTAAAAGAGCCTTGACTGAATTCAAATAAACACAGCCGGA
ATCTCCGTtcttaaaaatacaatttaCTATCTCAACTTCGGAATCACGAT
TGTAGTTAGATACTATTTCAAGCATAAACTGATGAGTTGAGGACAATCCA
TAGGAACCTATAAATGAACTGTCCCAAATAAAAACAGTCATTTTATTATT
GTTGAGATTGTTATTATTAATGTGTAATGCAGACTTAATTGAGAATGCTG
CGTAGATCTCTACATTGAATCCATTAATTTCAAACTGTGTTCTgctaaaa
attgtatattttattGAAACAAGTGTTTTTCCCATAAACTCGCCACTGTT
GATATTGATGTGAAGGTTATTGAAGGAACACGCGATAAAATGAATACCTG
TTGATAATTCTTCACGGGCAATCAAGGGTGCTGAAATATGATAGCTGGTC
TGTTGGGCTTGATTTCTGATGAAATATGTGTTGTCAAAGATAATAACAGG
GTTATGTGGCGTACTTATTTTAAATAAAGTGTAATTTGTAGAGATTTCAT
CCAAATCATTTGTCGAATTAACGGTTATCTGACAAAACAAAGTCTGTAGA
ACCATTGTTCTATTGTGGAtgtcaaaaattgttttaagtTTTGAATTATA
ATTTTGGTGACTGAACGATATGCCTGTGAAAGATACATTATCATAAATTT
CAACGAGGCTANATAATTTTGGTGACTGAACGATATGCCTGTGAAAGATA
CATTATCATAAATTTCAACGAGGCTATCTAAGTCTCCGTTAAACTGGATC
GTTGTAAAATGATTGATACGTTTCTTGTCTGGTCGATAAATATTCATTTG
AAGAGCTTTTTGAATACACATTGCTTCATTCAAGACGTACTTGAATCTCG
AGTCCAATAAAATGTTATCTCCGTCCAAACAAAGTTGAAGAGCATATGGG
ATTGATTGGCAAGGCTTTGATATATTACCGCAACCAGTAACATCCTGACT
CGTTGAATCACGTGATATGTGGATATCTTTTTGAAGGGaacctaaaaaaa
caaaataaattaaaaactaTTAGTTTTTATTCCGATGCCACACCTTGTTT
ATTCAGATACCACACCTAGTTTAAAGTGAAGTGTATGGTATGGTTTCACC
TCTCAGTACTTCACTTCAGTACAACGACATTTGGAATTCAGATCCAATAA
AGGATTTATCGAGATTTTGTTTAAGGCTAAAAACAAGAAATTAGATTTTC
TCTAATACCTCTTACACTACTGCAAATGATGTAGAAAATTACAAAAGCAT
TCTTCTCGTTCTTCATTCTCATCATCTAGAAGTAAgttcagaaaatagaa
aataaaaccAACAAGTATTTTTTGAAGCTCTGTCTTGTTATTTATTCAGT
GATTCTGGAAAGCTTATCAGAGCAAATGCTTAATAAAAACCATATAGCTC
TACTCTCCTCTATAATAATTCTCTACTTAACATTTTtaccaaaatgacaa
aattttgttttgatattcgTATTTGTTGTGTAAACATCTAACACAATGTT
GTGTACAATTTTGTAGCGATTCTTTTATCCATGCTGGAAGCTGTTAGATT
TTTGGATTCTCGAATTACATTTAGTTTCGGGATTGTTTATACTTATTTAG
ATTGCCTGTTCATTCCTGTTCAAGCAAGTTTCGAAAGCGAATGATGTGTT
TGTTTCCCTTATAGTCAAATATAGACTGGTATAGAAAGGTCTTAAATTAT
GAATATCAATGCGGATACTTCAAAGTTATctcttttatttctatttttaa
aaatactaaaaagcTTGAAGCTATATTTACTGCATACTACAGGGGGTTCG
GTACTATGACTACTATaagaattttttgcacaataccCCATTCTAGAGAA
GTGGTATTTAAATAACCATGTACTACAATTTTTAGGGATATCTTGACACA
GAGACCACCCAATTTTGGTCTTTTCAGGAGAAACATTGTCTTCTCGGGAC
CATTTTTGCAACATAATATTCATGTTTTGCAAAAATAGAGTTTATGAATT
GAGCAAACATAAAGGCATTTGACTGAATGCAAAAGTAATTGaacttggga
aattttctttaaatgatgaacattttaaactttgtttgaaaaattgcaaa
aattctgaaaataattcaaaaagtgataaaaatcaCTGATTTTAGTCACT
GTTATTTTCAATGCCCTGGTATTTGTGCTTTGTCTTGAGAGCGCTTTGAC
AAGTTTTCAGTTCACAGGTGGGTGATTGTTGAGAAAAATTGGTTGTACAT
TCAAATACCCATTGAAAATCCGAAAGAAGGGGGGgggggttccttCCTTT
TCTAGTATCTTTTGTTGTATTTACTTTCAAAGGCGAAAATTTGTCTTTAG
AAAAACAAGAAATCTCGGTTTGCTGATAAAttattctttctttctttgtc
AGGCTTACTTCAATGAAGAACCAGTCACGCAAGTCGATGTTCCATCAGGT
TCCGGCAACTTCAGTATCTTAGCCCAACACGTGCCAATCATTGCTGCCCT
TCGACCTGGTCTTATGACTGTTTTCAGTGAAGGTTAGTTTTCCTTTGTTT
CAATCTTAGAATAGCATTCTTTCAAACGGGGTTAATACCCCACCCTCTAA
AATTGGACCACACCCTTTGGCACCTACCCCGTCCTTAATCAAGAAATTCC
TCTGAACCACGCCTTTTCAGAAAAACCCCAATTTAAAATCAACTAAAACC
AAACTAAGGACAACTTTAATTGAATTAAATAAAATCTTCACTCTTTTTAA
AACATACCCCACCTTTTCCCTCCTTAACTGTCCTTGCCCGAGAAATCCCT
GTAAACCCCACccttttcgacttttttgaaaaattgtttacCCCGCCATC
TACCTTAAGGGTGGGCGAAAAGTATGGTAACTTACTTACTGATTTGTCAG
TAGTCATCTTTGTTTGGCCAAGCAAATAACAGCTACTACTTAAAGAAGAT
TGTGCCATTTAGACCCTTCTCTATGACCGATGCAATGGATACATGAACCA
TATTTAAAGCTTTTCATTTGCTATGttcattcgctttaagtgtgctCTCT
TCTTTCTTACTATgtagaaaccactctcaagggaatAAGCCTAATAACCC
TGATatggtttccgcattacagtaAATAAAGCGAATTTACGTTAGTTTCA
TCTTCCTAAAAGTTCCTATTTTGTGCCGACTTAATTGAATTAAAAACTCC
TTTTTTAGGAAACGCACAAAAGTTTTTCGTCAGTAGCGGCACCATCACCG
TCAACAGCGACTCCAGTGCACAAATCTTGGCTGAAGAAGCCCAACCCATC
GAAAACTTTGACGCTGATGCCGCCCGACGAACCGCCGATGCCGCGCGGAC
TGCTTTGGCCAGTGCAGCGGACGAAGCTGGTAAAGCCGAAGCACAAATTC
AACTAGATACTTGTGAAGCTTTACTAAACGCTTTAGAAGGAAAATAAATA
AGGTATGTGCTGCCTTTCTatctttttttgtaattttctctcTGTTCAAA
TTGTGTTTTTAGACCTTCCGTTgccatccacatagtacgtacggggtctt
ctcaaaagcgtatgcttgcgtacagggtgCGGGGAGGgctcaaaggaaaa
tgtacgtacgcagagaaaattttcatagccctttttcgcttgtttttttt
tgtcgacttttacgcttcttatacgcatcaaggaaaagaaaaaagtttct
ttataaacattgagtttcatgtatgaaataaaggtccgaaccaaacgatt
tgaattcgaaattttctttaacCGAGGGGAggggggtgaatgaaaaagta
tgTACTTACTAGGGGGGTAtggccatttgcgtacgcttacGTACAAGGGG
GACGGGGTACGTACTATGTGAACGGCCCCTATTATCAAAGCAGTCGTCAA
AGAACAAAATTACTAAGGAGAAGATGGGACTGACAAGACTGAAACCTCTC
TCCAGAAAAAGGGTATAACATATTTCATCTCTGCTCTGTCTATTTTTTTC
AGCAGCAATGAATGATCCTTGGTGGAATGTTCTagtttaaaatataaatt
ttaatttgttttttgaaaaaaaaaatacaaaagcataatatcaaaatcaa
ac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057173-exon-scaffold_286-1491911889:126837..127154 | TCONS_00057173-exon-scaffold_286-1491911889:126837..127154 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1510915933:126837..127154 | TCONS_00057173-exon-scaffold_286-1510915933:126837..127154 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1575043694:126837..127154 | TCONS_00057173-exon-scaffold_286-1575043694:126837..127154 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1491911889:140539..140668 | TCONS_00057173-exon-scaffold_286-1491911889:140539..140668 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1510915933:140539..140668 | TCONS_00057173-exon-scaffold_286-1510915933:140539..140668 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1575043694:140539..140668 | TCONS_00057173-exon-scaffold_286-1575043694:140539..140668 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1491911889:141345..141588 | TCONS_00057173-exon-scaffold_286-1491911889:141345..141588 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1510915933:141345..141588 | TCONS_00057173-exon-scaffold_286-1510915933:141345..141588 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1575043694:141345..141588 | TCONS_00057173-exon-scaffold_286-1575043694:141345..141588 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1491911889:142139..142238 | TCONS_00057173-exon-scaffold_286-1491911889:142139..142238 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1510915933:142139..142238 | TCONS_00057173-exon-scaffold_286-1510915933:142139..142238 | Clytia hemisphaerica | exon |
| TCONS_00057173-exon-scaffold_286-1575043694:142139..142238 | TCONS_00057173-exon-scaffold_286-1575043694:142139..142238 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_286 | supercontig | scaffold_286:126837..142238 + |
Blast
BLAST of TCONS_00057173 vs. Swiss-Prot (Human)
Match: ATPD (ATP synthase subunit delta, mitochondrial OS=Homo sapiens GN=ATP5D PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.087e-25 Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 289 LNLTFGTPTQAYFNEEPVTQVDVPSGSGNFSILAQHVPIIAALRPGLMTVFSE-GNAQKFFVSSGTITVNSDSSAQILAEEAQPIENFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIQLDTCEALLNALE 678
++ TF +PTQ +FN V QVDVP+ +G F ILA HVP + LRPGL+ V +E G K+FVSSG+I VN+DSS Q+LAEEA ++ D AA+ + A+ L ADEA +AE QI+++ EAL+ ALE
Sbjct: 38 MSFTFASPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEALVKALE 168
The following BLAST results are available for this feature:
|
