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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056427 ID=TCONS_00056427|Name=TCONS_00056427|organism=Clytia hemisphaerica|type=transcript|length=3144bp
ATACGTGATTATAGAATGTAACAAATACATCTTTATTTAAGAGCCTCGCG
ACTCACGTAACTTCCCAAGAACTTTCAAGACCAGGATTCGTAGTATCATA
AACTATTGTTTAAATACATTGGTACAAAATTTATTACCTTAAGGGCAGAA
ATTTTCGTGGGAAccaattttcacagaatttaatctcgcggttttttgac
aaacccgcgaaacacgaatattctcaggatttaaaaaattacttCTAAGA
TTGGTTAGTTTATGGCGAAatatttcttcccttaaaggtatttcttcaaa
tttattttctttaggTTGAAGAATTAGGAGGTATCCGTATTCACGAGATT
GGTGAGGGAGATGATGATGGTAATATTGAGGATGATTTTGTGTCGTGGAG
AGAAACATTCTGGGATACCGTGTGTGAGAAGTATCATTTGAATAAAGATA
AACGTAAATTGTCATGCTCTGTCTCAAGGGATTACACGCTCAAGAAACCT
GAGAATCTCTCAGACGACCAGATTTACCAAGGTGAGATCACTAAGCTTGG
TTCGTATACCAAACAACGTCCACCTTACGATGCAAAGAATCCTTACATGG
CAAATGTGGCTGTCAACAGGGAACTCCACAAAGCCGGTGGTCGATCTTGT
ATGCATATTGAAATTGATATCGCAGACTCAGGGATCAAATACAGCGCAGG
TGACCATGTTGGTATTTATCCCACAAATGATCCAGAATTGGTCGAAAAGA
TTGGAAAGTTACTCAATATCGATCTGGATGAAGTGATCTCTTTGGATAAT
GTTGATCCAGATGCTTCTAAGAAACATCCGTTTCCCTGCCCGTGTTCATA
CCGTACCGCCTTATTACATTACGTCGATATTACGTCAACGGTTAAAACTC
ACGTATTAGCCGAGTTGGTCGCTCACACCAAAGACCCAGAAGAATTAGCC
AAGTTGGATTTGATGACAAGTTCTTCTGCAGACGGCAAAAAGATGTATGA
TGAATGGGTAGTTGGGAACAACAGGCATATCGTGGCCGTAATGGAAGATT
TGAAAAGCTGTAAACCGCCCCTTGATTTGTTGTTAGAGTTGATGCCTAGG
CTTCAATGTAGGTATTATTCGATTTCATCATCTTCTACAATGCACCGCGA
TCGAATCCATGTCActgctgttgttgttgattGGATTTCTAAAGCTGATC
GATTACACAAAGGCGTCGCCACCCACTGGTTGAAAACCAAAATCCCCTGT
GAAAACATCGCCAATCTTCGTGTCCCCATTTTCGTTCGCCGTACAAACTT
CCGATTACCTGTTCGCCCAATTTCCCCTGTTTTGATGGTTGGTCCTGGAA
CCGGATTTGCTCCTTTCCGCGGCTTCATACAAGAGCGTCAATCACAACAA
GAATCAGGCAAAGAAACCGGAGATACTATCCTGTATTTCGGATGTCGTAA
GCGTGCAGAGGATTTCATTTACGAGGATGAGTTAACGAGTTACGCCGAAA
AAAGAGTGATTACGGACTTGCAGTTAGCATTTTCGAGAGATCAAGAAGCA
AAAGAGTATGTTACGCATAAGTTGAAGGCCGATATGGCGAAAATCTGGGA
TGTGATTAAGAAAGGAGGGCATTTATACGTGTGTGGTGATGCACGCTTTA
TGGCTAAAGATGTGCACGACATTTTTATTGATTCTATCGTGACACACGGT
GAGAAAAGCAAAGAACAAGCTACGAGGTTTTTGAGTAGTTTGAGCGATAA
GGGACGATATCAAGTTGATGTATGGTCTTGAGATATCCTCCTTCtttttt
gttattattgttTAGGGGTGTTCTTTTTGATATGATTATTTAATTCTTTG
CTTTATACTTTAATAaaaatttactgatttttttgaaattttatttatcC
TTAGCGAAATTTTATTAGGGACCAGTTGTGTCAGGGGAAGAGCAGAAAGG
ATTTTCATATCGTGAAACTTTACGATATCTCTCTTATTTAGAATACCCTT
GAGCATCTTGGTTTTGTTTGAAtgtcaaaatgaaaattgatcAAGGAGAC
TTGATCAGCAAGTAGACAAAGTTGTAGGATTAGGACATTTATCTGTCCCG
CTTTTTTCTGACACGCTactcttgtgtgcttaattgtggggggggggttc
attttgcaatttttagaaaaaaaatcacccccatatcactttataatgac
cccTCCCATTGTATGACCTTTATGCTATGAAGtgccaaaattggccaaaa
acctttttagcaaaatcaggtCAACAGCACTTAATTATGCCCCCCCCCca
cattttgttgatttttatctggAGTACCCACCCCTGCTTATCACACCCCc
tctacaattaagcacacatAAGTacaatttgtaaaatattgataatttaC
TTCATAATATTTTTGATTCTGCTTTTTCTTAATCTTGTTACTAATTTGTT
GTCGTGAAAATAATTCAGAATGCTACGATGCAGAATTTTGCAATATACTA
AATTATACTACCTGTCTTTATTTTAAGaagatccaaaatttttgaagcct
gcggatgttcttaacatgttcttattttcaccattttgtgagcattttat
CCATTTTCCCAAGAAAATGTGTGCTTATGGTCATCAAtgctttgaaatgt
tcttaacttgttctcaatattttgaccatcgaagcatGATGTTCTAACAT
AGatctttcttataagaaaatgtgTATTTCTGAAATATGAGGCTGAGGGT
GTTGTTAGCTTGTTCTCCGCATTCCgtattttattctattttattcctgg
ttttgttttttttggtgccatttttatcatttttgtagTCGAATATATTT
CTTATCAAGCGATCCTCTTTTCGATTGACTTGGAccgtgaaaaaaaattt
attcattttaatTTGCGATGATTATTTAATagtgaatatttttaaaaata
tttttgatggcATTTTTTGATCAAAGTTTGATAGGGTTAATAACATAATA
CAATAGTATAGATATACAATTTCCACTTTAGTTTTTCACTCCAACTTTGT
GGCAGCTCAGACTATATGCGGGGTCGTTTTATTTAGTAGTGTGCATTTTT
CTCCGGAACGGACTAAATTGTCTTAGATTTTTACAACTTTGACC Run BLAST on NCBI protein sequence of TCONS_00056427-protein >TCONS_00056427-protein ID=TCONS_00056427-protein|Name=TCONS_00056427-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MANVAVNRELHKAGGRSCMHIEIDIADSGIKYSAGDHVGIYPTNDPELVE
KIGKLLNIDLDEVISLDNVDPDASKKHPFPCPCSYRTALLHYVDITSTVK
THVLAELVAHTKDPEELAKLDLMTSSSADGKKMYDEWVVGNNRHIVAVME
DLKSCKPPLDLLLELMPRLQCRYYSISSSSTMHRDRIHVTAVVVDWISKA
DRLHKGVATHWLKTKIPCENIANLRVPIFVRRTNFRLPVRPISPVLMVGP
GTGFAPFRGFIQERQSQQESGKETGDTILYFGCRKRAEDFIYEDELTSYA
EKRVITDLQLAFSRDQEAKEYVTHKLKADMAKIWDVIKKGGHLYVCGDAR
FMAKDVHDIFIDSIVTHGEKSKEQATRFLSSLSDKGRYQVDVWS Run BLAST on NCBI transcript from alignment at scaffold_276:288615..293410+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056427 ID=TCONS_00056427|Name=TCONS_00056427|organism=Clytia hemisphaerica|type=transcript|length=4796bp|location=Sequence derived from alignment at scaffold_276:288615..293410+ (Clytia hemisphaerica)
ATACGTGATTATAGAATGTAACAAATACATCTTTATTTAAGAGCCTCGCG
ACTCACGTAACTTCCCAAGAACTTTCAAGACCAGGATTCGTAGTATCATA
AACTATTGTTTAAATACATTGGTACAAAATTTATTACCTTAAGGGCAGAA
ATTTTCGTGGGAAccaattttcacagaatttaatctcgcggttttttgac
aaacccgcgaaacacgaatattctcaggatttaaaaaattacttCTAAGA
TTGGTTAGTTTATGGCGAAatatttcttcccttaaaggtatttcttcaaa
tttattttctttaggTTGAAGAATTAGGAGGTATCCGTATTCACGAGATT
GGTGAGGGAGATGATGATGGTAATATTGAGGATGATTTTGTGTCGTGGAG
AGAAACATTCTGGGATACCGTGTGTGAGAAGTATCATTTGAATAAAGATA
AACGTAAATTGTCATGCTCTGTCTCAAGGGATTACACGCTCAAGGTAAGA
AGGGAAAATTGTTTTTCATCAAATCAGGGAGGGTATGGTTGGTACTAACA
TATCAGAGACATATGTATACTATATTTGGGGACATTTTGATACACAATCA
Tggatggacaaaaggttgtagacttttcaaaaattgagtaaaatctctca
aaatgcCCTACTTTCCCCTCTCCCCCCTCTGCAACGTTGCACTGGTGCTG
GCATCGCTACACGCCAATATCACAACTCATTTTCTATCAACATTGTGGGG
AGAGGAAATTTCTaaaagtctacaaaccttttgtccatgattgcagAGAC
CAGCTAATCTTTGTCTTCTCGGGACCATTTTAtctaaaaagtgatttttg
taaCATAATATTCATTTTTTGCAAAGATTTACACTTTTGAACGATGCTAC
TTTACGAATTGAGCAAACATTAGAGAtatttgcaaaaatatttttataat
taataGTTATCTTGAGCAAAGCTTCTCCCAATTTCTCTTGCTCAAAACAA
AagtatttgaagatttttttataaaagcttACAGATCTCACAGCCTCGCA
TTCTTATTCAAAAGTTCCTCTGTCATCTCTCATCATTCTTTATGACATaa
atcgttcttataaaaggaAACATTCACACCCTTCATTGATTCCgatattt
tttaattctgttGCTCAACAGCATTAGTGAGTTAACTCGAACTCCTCTTT
AAATCTCTATAAAAATTGGAACTAGTTCTCATTGGAAACAAATTGCTGAA
TTAAGTCATGATTAACCTCTctcaaatcgaaaaatccctgaaacaaagtg
gaagtactgaaattgcaattctcgcccgatctttgaattctaaaaaacgt
tgaaataaccaaaattgccaatatatttcggcactGATTGTAGGTGTAGC
ACTGAATTAAGTATTTAACTGTTCATATCATCTGGTTTTTACAATCTAGA
AACCTGAGAATCTCTCAGACGACCAGATTTACCAAGGTGAGATCACTAAG
CTTGGTTCGTATACCAAACAACGTCCACCTTACGATGCAAAGAATCCTTA
CATGGCAAATGTGGCTGTCAACAGGGAACTCCACAAAGCCGGTGGTCGAT
CTTGTATGCATATTGAAATTGATATCGCAGACTCAGGGATCAAATACAGC
GCAGGTAATTAATTGTTTATAAATCTATTGTTATTACATTTTTAGTCAAC
TTGCGACACCTGCtaattattttgtctttttttcaggATGATATCCTAGA
AAAACTTAGGGTTCCTcttaaaaaatggtttttattaaaaaaatttattt
tcaaagggGACGTCATCAGCCCAAATTTTTACCATACATTTTTGttacat
ttgaaaaatttagaatgaGACGATCACAATAAGCTATATACTATTagaag
tttttgtttttcaatgcGTAATAatatcatatcttaaagatgTCTCCTAT
TCAGACTAGGAAAATCCTCGATATTGCGATTTTGAAGTTATAAAGCAAAA
CACTATAATTTGAGATCGGGCCAAAATTTATAAACATCtcagtgttttta
tttaaattgaGAGAGTCTTTGCACCGAATAAATTTGCTTTGCGTAATCAA
CCCTCTGCTTTGGTCGTTATTTTCTCCTGGGaaacatatttttatcaaat
gataaTAGTACGAAAGTTGAATAACCAACTCAAACATACCTTTTATCGGa
gaaaaatgtcgggggaaagtgacgaaaatcttgaggggtgacgaaatttt
tttcaaCGGATTAAAATCcaacattttttccccgattaGGTAATTTCATC
CGTAATtttgattaaagattttttaaactcttttttCGCACTTTTGACTA
GGTGACCATGTTGGTATTTATCCCACAAATGATCCAGAATTGGTCGAAAA
GATTGGAAAGTTACTCAATATCGATCTGGATGAAGTGATCTCTTTGGATA
ATGTTGATCCAGATGCTTCTAAGAAACATCCGTTTCCCTGCCCGTGTTCA
TACCGTACCGCCTTATTACATTACGTCGATATTACGTCAACGGTTAAAAC
TCACGTATTAGCCGAGTTGGTCGCTCACACCAAAGACCCAGAAGAATTAG
CCAAGTTGGATTTGATGACAAGTTCTTCTGCAGACGGCAAAAAGATGTAT
GATGAATGGGTAGTTGGGAACAACAGGCATATCGTGGCCGTAATGGAAGA
TTTGAAAAGCTGTAAACCGCCCCTTGATTTGTTGTTAGAGTTGATGCCTA
GGCTTCAATGTAGGTATTATTCGATTTCATCATCTTCTACAATGCACCGC
GATCGAATCCATGTCActgctgttgttgttgattGGATTTCTAAAGCTGA
TCGATTACACAAAGGCGTCGCCACCCACTGGTTGAAAACCAAAATCCCCT
GTGAAAACATCGCCAATCTTCGTGTCCCCATTTTCGTTCGCCGTACAAAC
TTCCGATTACCTGTTCGCCCAATTTCCCCTGTTTTGATGGTTGGTCCTGG
AACCGGATTTGCTCCTTTCCGCGGCTTCATACAAGAGCGTCAATCACAAC
AAGAATCAGGCAAAGAAACCGGAGATACTATCCTGTATTTCGGATGTCGT
AAGCGTGCAGAGGATTTCATTTACGAGGATGAGTTAACGAGTTACGCCGA
AAAAAGAGTGATTACGGACTTGCAGTTAGCATTTTCGAGAGATCAAGAAG
CAAAAGAGTATGTTACGCATAAGTTGAAGGCCGATATGGCGAAAATCTGG
GATGTGATTAAGAAAGGAGGGCATTTATACGTGTGTGGTGATGCACGCTT
TATGGCTAAAGATGTGCACGACATTTTTATTGATTCTATCGTGACACACG
GTGAGAAAAGCAAAGAACAAGCTACGAGGTTTTTGAGTAGTTTGAGCGAT
AAGGGACGATATCAAGTTGATGTATGGTCTTGAGATATCCTCCTTCtttt
ttgttattattgttTAGGGGTGTTCTTTTTGATATGATTATTTAATTCTT
TGCTTTATACTTTAATAaaaatttactgatttttttgaaattttatttat
cCTTAGCGAAATTTTATTAGGGACCAGTTGTGTCAGGGGAAGAGCAGAAA
GGATTTTCATATCGTGAAACTTTACGATATCTCTCTTATTTAGAATACCC
TTGAGCATCTTGGTTTTGTTTGAAtgtcaaaatgaaaattgatcAAGGAG
ACTTGATCAGCAAGTAGACAAAGTTGTAGGATTAGGACATTTATCTGTCC
CGCTTTTTTCTGACACGCTactcttgtgtgcttaattgtggggggggggt
tcattttgcaatttttagaaaaaaaatcacccccatatcactttataatg
accccTCCCATTGTATGACCTTTATGCTATGAAGtgccaaaattggccaa
aaacctttttagcaaaatcaggtCAACAGCACTTAATTATGCCCCCCCCC
cacattttgttgatttttatctggAGTACCCACCCCTGCTTATCACACCC
CctctacaattaagcacacatAAGTacaatttgtaaaatattgataattt
aCTTCATAATATTTTTGATTCTGCTTTTTCTTAATCTTGTTACTAATTTG
TTGTCGTGAAAATAATTCAGAATGCTACGATGCAGAATTTTGCAATATAC
TAAATTATACTACCTGTCTTTATTTTAAGaagatccaaaatttttgaagc
ctgcggatgttcttaacatgttcttattttcaccattttgtgagcatttt
atCCATTTTCCCAAGAAAATGTGTGCTTATGGTCATCAAtgctttgaaat
gttcttaacttgttctcaatattttgaccatcgaagcatGATGTTCTAAC
ATAGatctttcttataagaaaatgtgTATTTCTGAAATATGAGGCTGAGG
GTGTTGTTAGCTTGTTCTCCGCATTCCgtattttattctattttattcct
ggttttgttttttttggtgccatttttatcatttttgtagTCGAATATAT
TTCTTATCAAGCGATCCTCTTTTCGATTGACTTGGAccgtgaaaaaaaat
ttattcattttaatTTGCGATGATTATTTAATagtgaatatttttaaaaa
tatttttgatggcATTTTTTGATCAAAGTTTGATAGGGTTAATAACATAA
TACAATAGTATAGATATACAATTTCCACTTTAGTTTTTCACTCCAACTTT
GTGGCAGCTCAGACTATATGCGGGGTCGTTTTATTTAGTAGTGTGCATTT
TTCTCCGGAACGGACTAAATTGTCTTAGATTTTTACAACTTTGACC Coding sequence (CDS) from alignment at scaffold_276:288615..293410+ >TCONS_00056427 ID=TCONS_00056427|Name=TCONS_00056427|organism=Clytia hemisphaerica|type=CDS|length=2370bp|location=Sequence derived from alignment at scaffold_276:288615..293410+ (Clytia hemisphaerica)
ATGGCAAATGTGGCTGTCAACAGGGAACTCCACAAAGCCGGTGGTCGATC
TTGTATGCATATTGAAATTGATATCGCAGACTCAGGGATCAAATACAGCG
CAGGTGACCATGTTGGTATTTATCCCACAAATGATCCAGAATTGGTCGAA
AAGATTGGAAAGTTACTCAATATCGATCTGGATGAAGTGATCTCTTTGGA
TAATGTTGATCCAGATGCTTCTAAGAAACATCCGTTTCCCTGCCCGTGTT
CATACCGTACCGCCTTATTACATTACGTCGATATTACGTCAACGGTTAAA
ACTCACGTATTAGCCGAGTTGGTCGCTCACACCAAAGACCCAGAAGAATT
AGCCAAGTTGGATTTGATGACAAGTTCTTCTGCAGACGGCAAAAAGATGT
ATGATGAATGGGTAGTTGGGAACAACAGGCATATCGTGGCCGTAATGGAA
GATTTGAAAAGCTGTAAACCGCCCCTTGATTTGTTGTTAGAGTTGATGCC
TAGGCTTCAATGTAGGTATTATTCGATTTCATCATCTTCTACAATGCACC
GCGATCGAATCCATGTCActgctgttgttgttgattGGATTTCTAAAGCT
GATCGATTACACAAAGGCGTCGCCACCCACTGGTTGAAAACCAAAATCCC
CTGTGAAAACATCGCCAATCTTCGTGTCCCCATTTTCGTTCGCCGTACAA
ACTTCCGATTACCTGTTCGCCCAATTTCCCCTGTTTTGATGGTTGGTCCT
GGAACCGGATTTGCTCCTTTCCGCGGCTTCATACAAGAGCGTCAATCACA
ACAAGAATCAGGCAAAGAAACCGGAGATACTATCCTGTATTTCGGATGTC
GTAAGCGTGCAGAGGATTTCATTTACGAGGATGAGTTAACGAGTTACGCC
GAAAAAAGAGTGATTACGGACTTGCAGTTAGCATTTTCGAGAGATCAAGA
AGCAAAAGAGTATGTTACGCATAAGTTGAAGGCCGATATGGCGAAAATCT
GGGATGTGATTAAGAAAGGAGGGCATTTATACGTGTGTGGTGATGCACGC
TTTATGGCTAAAGATGTGCACGACATTTTTATTGATTCTATCGTGACACA
CGGTGAGAAAAGCAAAGAACAAGCTACGAGGTTTTTGAGTAGTTTGAGCG
ATAAGGGACGATATCAAGTTGATGTATGGTCTTGAATGGCAAATGTGGCT
GTCAACAGGGAACTCCACAAAGCCGGTGGTCGATCTTGTATGCATATTGA
AATTGATATCGCAGACTCAGGGATCAAATACAGCGCAGGTGACCATGTTG
GTATTTATCCCACAAATGATCCAGAATTGGTCGAAAAGATTGGAAAGTTA
CTCAATATCGATCTGGATGAAGTGATCTCTTTGGATAATGTTGATCCAGA
TGCTTCTAAGAAACATCCGTTTCCCTGCCCGTGTTCATACCGTACCGCCT
TATTACATTACGTCGATATTACGTCAACGGTTAAAACTCACGTATTAGCC
GAGTTGGTCGCTCACACCAAAGACCCAGAAGAATTAGCCAAGTTGGATTT
GATGACAAGTTCTTCTGCAGACGGCAAAAAGATGTATGATGAATGGGTAG
TTGGGAACAACAGGCATATCGTGGCCGTAATGGAAGATTTGAAAAGCTGT
AAACCGCCCCTTGATTTGTTGTTAGAGTTGATGCCTAGGCTTCAATGTAG
GTATTATTCGATTTCATCATCTTCTACAATGCACCGCGATCGAATCCATG
TCActgctgttgttgttgattGGATTTCTAAAGCTGATCGATTACACAAA
GGCGTCGCCACCCACTGGTTGAAAACCAAAATCCCCTGTGAAAACATCGC
CAATCTTCGTGTCCCCATTTTCGTTCGCCGTACAAACTTCCGATTACCTG
TTCGCCCAATTTCCCCTGTTTTGATGGTTGGTCCTGGAACCGGATTTGCT
CCTTTCCGCGGCTTCATACAAGAGCGTCAATCACAACAAGAATCAGGCAA
AGAAACCGGAGATACTATCCTGTATTTCGGATGTCGTAAGCGTGCAGAGG
ATTTCATTTACGAGGATGAGTTAACGAGTTACGCCGAAAAAAGAGTGATT
ACGGACTTGCAGTTAGCATTTTCGAGAGATCAAGAAGCAAAAGAGTATGT
TACGCATAAGTTGAAGGCCGATATGGCGAAAATCTGGGATGTGATTAAGA
AAGGAGGGCATTTATACGTGTGTGGTGATGCACGCTTTATGGCTAAAGAT
GTGCACGACATTTTTATTGATTCTATCGTGACACACGGTGAGAAAAGCAA
AGAACAAGCTACGAGGTTTTTGAGTAGTTTGAGCGATAAGGGACGATATC
AAGTTGATGTATGGTCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056427-exon-scaffold_276-1491911889:288615..289108 | TCONS_00056427-exon-scaffold_276-1491911889:288615..289108 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1510915933:288615..289108 | TCONS_00056427-exon-scaffold_276-1510915933:288615..289108 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1575043694:288615..289108 | TCONS_00056427-exon-scaffold_276-1575043694:288615..289108 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1491911889:290064..290268 | TCONS_00056427-exon-scaffold_276-1491911889:290064..290268 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1510915933:290064..290268 | TCONS_00056427-exon-scaffold_276-1510915933:290064..290268 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1575043694:290064..290268 | TCONS_00056427-exon-scaffold_276-1575043694:290064..290268 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1491911889:290966..293410 | TCONS_00056427-exon-scaffold_276-1491911889:290966..293410 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1510915933:290966..293410 | TCONS_00056427-exon-scaffold_276-1510915933:290966..293410 | Clytia hemisphaerica | exon |
| TCONS_00056427-exon-scaffold_276-1575043694:290966..293410 | TCONS_00056427-exon-scaffold_276-1575043694:290966..293410 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:288615..293410 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
BLAST of TCONS_00056427 vs. Swiss-Prot (Human)
Match: NCPR (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2) HSP 1 Score: 468.774 bits (1205), Expect = 7.169e-151 Identity = 228/465 (49.03%), Postives = 319/465 (68.60%), Query Frame = 3
Query: 387 FVSWRETFWDTVCEKYHLNKDKRKLSCSVSRDYTLKKPENLSDDQIYQGEITKLGSYTKQRPPYDAKNPYMANVAVNRELHKAGGRSCMHIEIDIADSGIKYSAGDHVGIYPTNDPELVEKIGKLLNIDLDEVISLDNVDPDASKKHPFPCPCSYRTALLHYVDITSTVKTHVLAELVAHTKDPEELAKLDLMTSSSADGKKMYDEWVVGNNRHIVAVMEDLKSCKXXXXXXXXXXXXXQCRYYSISSSSTMHRDRIHVTAVVVDWISKADRLHKGVATHWLKTKIPC-ENIANLRVPIFVRRTNFRLPVRPISPVLMVGPGTGFAPFRGFIQERQSQQESGKETGDTILYFGCRKRAEDFIYEDELTSYAEKRVITDLQLAFSRDQEAKEYVTHKLKADMAKIWDVIKKGGHLYVCGDARFMAKDVHDIFIDSIVTHGEKSKEQATRFLSSLSDKGRYQVDVWS 1778
F++WRE FW VCE + + + S R Y L ++ ++Y GE+ +L SY Q+PP+DAKNP++A V NR+L++ R MH+E+DI+DS I+Y +GDHV +YP ND LV ++GK+L DLD V+SL+N+D +++KKHPFPCP SYRTAL +Y+DIT+ +T+VL EL + +P E L M SSS +GK++Y WVV RHI+A+++D S +PP+D L EL+PRLQ RYYSI+SSS +H + +H+ AVVV++ +KA R++KGVAT+WL+ K P EN VP+FVR++ FRLP + +PV+MVGPGTG APF GFIQER ++ GKE G+T+LY+GCR+ ED++Y +EL + +T L +AFSR+Q K YV H LK D +W +I+ G H+YVCGDAR MA+DV + F D + G QA ++ L KGRY +DVWS
Sbjct: 216 FITWREQFWPAVCEHFGVEATGEESSI---RQYELVVHTDIDAAKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVWS 677
The following BLAST results are available for this feature:
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