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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000087:198135..206300- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03354.1 ID=Blg03354.1|Name=Blg03354.1|organism=Branchiostoma lanceolatum|type=mRNA|length=8166bp|location=Sequence derived from alignment at Sc0000087:198135..206300- (Branchiostoma lanceolatum)
CATAGATAAGCCAATAGTCAGGTGTTTTATAGCTAGTGCTCGGCTCAGAA
AATCGAACCACATTTTAGTTTAGAATAGAAGTCTACGAAGTACCTGTCTC
CTGATCTGCACGGTTATTCTAACCACTATATCGATCAAGACAGTAACCCT
TTGAAAGAGACTACTTACAAACGTCTACTGTAAACGTTCTGTGAGACCCG
GACCATGGCTGGACGGTCTGTTGTTGTGTTGTGTTGCTTCCTGCTTTTGG
GGGTTCAGCATATTGCCGAGGCTGACGACAACTATCTAAGTTTTGAAGCA
ACAGGTATGAAAACTGTTCTCCCTTTTCTTGTTTGTTTGTTTGTTTGTTT
GTTTGTTTGAACCATTGTTTATTCATGATAAGCTCAAACTCGGCACGCAG
GCCGCTTTTCATTGAGGTCATGAGGGAAGAGGTAAGGGTCAGATACAATC
ATATGATAACAGACATGCACAGTCATTTGAGTCCTAATAACTCTATCATT
ACATATTTATGGTACAACAATATACAATTGCCTCAACATATAGTAGGGCG
AAAGCTGGTTCATGGTCCGTGTCCGTTCGGTTTGTTCATTTCCGTTACTT
CAAGAGTCTCTTAAAGGAAGTCAGATTCGGAGCCGTACGTGTGTCTGGCG
GTAGGCTGTTCCAGACATTTGGTCCGCGGTAGGCTACCGATCTTCTGAAG
ATCTCTCGCTTGGGTTTGGGGACAACCAGCTGACTGCTTGTGCTTTGTCT
GGTTGTCCGTGTACTTTGGTCTCTTCAGTACACAAACATCTGGCGCATGT
AGGGTGGCAGTTTGTTGTTTAGGGCTTTGTAGGTTTGTACGGCATTGTAG
TATTGGAGTGTTTCTTTAATGTCTTTCCAGCTCAACCGAGAGAGCACTTC
GGTTGATGGTGTCCTGTGTGGGGCCTTTAGTATTAGTTTTCCAGGCAACG
TTTAAAATCGCGGTGCACAACACTATGGCCCAGTTCACACTTGTGTGTAT
ATACAAGACCGCATGAGTTGTGTACTAACATTATTTTGGTTTGGGTAAAG
TTTGCGGGTTAGTAGTTGTTTTGTACTTTGACCCACCGTTGTGAAGTCAT
GTTACCGAACCGAAAAAAAGGACTTATTCAACAGCAAACTTTGCCTATCT
AAACCAAAACAAGTAAATTCGCAACTCATATACGGCCTTCAATACAATGT
TAGGACTTAAATGACTATGTATCACTGTTACATTGTATCTGACCCTTACC
TCTTCCCTCATATCCTCAATGAAAAGCGGCCTGCGTGCCGATTTGAGGTT
CTCATGAATAAACAAAGGTTCAAACAAACAAAATCAAACAAACAAACATC
ACAAGTATGAGTGGGCCCTAGTTCAACCGACTATTTGTAAGGGGACCACA
GGATATATGATTTGATGATTTATCTTTAAAATGAGATGTTCTTTTTTGTA
GACCATGATCGTCTGTGGGAGGTGTGGAAGTATTGGCACGGGAAGACCTA
CTCAACAGAAGATGAGGAAACAACGAGAAGAACCATTTGGGAAAAGAATA
TGGACGCCATCTTTGCCCACAATGCAGCGGGAAAAAGTTATACTTTGGCC
ATGAACAAATATGGTGATCAGGTACATTGACCAATCCGTGTTTTTGCGAC
GCAATGTTTTGAAACTTCCAAGGAAATAACAGCTTTTAGGGGCAAAATAA
AGGGGGGGGGGGAGAGAAATGAAAAAAAGAAACATGAAACGTCTTTTGTC
AGCATGTACGAGAATCACAATGTAGATATTTACGGTCTGTGTGTGTGTGT
TTACCACTGACGCTAAGTAAGGCTTGCCAATCTATCGATTCTGCCTTTGC
CCTATATATATCTCTATATTTTACACACATACGATGGAAGTTTTGCAAAC
TTCTTAAAATTTATCGTTTTAAATACGTACAGAAAACAGTTGAAGTCAGC
AATACAGAATTCTTTAGCTTTGCTTATCATATTCTATCATATCACTCAAA
TGTTGTGTCCCTGTCCCTACTGAAGTTCCTGTCCCTGTCCCTACTGTTTC
TTAATAATAATAGTCTTTATTGCATATTCCTGCCCAATGTGGTCTATACG
AAGCATAATGCAAAATATGAATTGATAAGATGCTACATTCTAACATTGAA
AAAACTAGCAACAGACAAACTGTGGACTATTGCTAAATTAATGTTGATCA
CCTAAGACTCTATTCTCTCTTTTTGAAATATTTGGAAACATGACTACACA
CTTTGTCTATTATATGTTCGTTCTTACATGACATCAGGTGTATAAAAGTG
TCCTGCTTTGACATTTTTGCACATTTCTTGTCTAATTTTATTGTCTTAAA
CAGTGATTAGCGCTCATCTAGCTTCATAGTATAATTTCGTCTTTATTAGA
TTCAACTTCCCAAAACTACAAATATCATCACAAACGAGGAAAAGTGGGAG
AGAGAAAACATGGACCGAAGGCGTCATTCCGTTGCCATGGGAGCATGTGG
AGGGACCACGCCCCCTTCCTCCCTGGACTGGCGTAAGAAGGGTGTGAGTA
CGGTGGTGAGGACGGAAGGGCAGACTGGGAAAGTCATCCCTTATGTACTC
ACAGGTAGGTGCACCTTTCAATGTAAAGCTGGTAGAGGCGATGGACCCAT
CTTTTTGAAATTTCATCAGGTTATACATAAGTCGTGTCCACGTATCTTGG
CAATCACTCGTAAATCGAGTATGATGACCGTGTCAGTTCCTACACCTGAG
TGAGGAGGGTTGACACGGTAGCCTTCGTGTGGATTTGTTTAGGGAGGATG
ACAGGTTGCGAATCTGAGACCCACACACTTTGGGCATCCGCATTCTCCAG
CGGCACCAATTCGAGGGAGACGTGCTGGTTCTGGTTGGGATGCTTGCAGC
GAGCTACCGGATGACTTGGTTACGCGCAAGGTCCGCCTTGATAACGCCAG
CCCGCCTGGCGCTGCTCTCGTCCGCCAGTTGAAGACAACTGCCGTTGGAG
ACTTGTCCCTCTAACTGAGGGGGGAAATCCGTGTAAAGTGCCTTTCCCAA
GGGCACAACGTCGTGTCCACGTATACTCTCAGGTTTTTATCTGGGTTTCT
TTTCCAGAGCCACAGGTAAGAGGTTATCCAAGGCGTGTGGCTTATACCAG
CGGTCTGTAACTTACTGCAATACTAATATTTATCTTCGCCGAGTACTTGT
ACTCGGAGAAGATTATGTTTTCGGTTGAAAAATCTGTTGGGTGGGTCTGA
ATGTATGTCAGGAGCATAACTCAAGAAAACTTCAATGAATCTTTATGATT
TTTGGTAGGTGTGTAGTGGTTGTGTAAAGGAAGGTCAAGTTCGAAAATGG
TTTACCTTGCGTTTTTCAATAGTACTGCAGCGGACTTTGCATTTTTTTGT
GTTTGTATGTAGGCAAAAAAAGTGACGGAAACGTTGATGGATCTTCATGA
TTTTTTGCAGGTGTGTAGATGTTGTAGAAACGGAGGTCAAGTTCAAAAAT
GGTTCCCCTGGTATTTTCCGTCGGTACTGCAGCGGGCTTTGTGTGGATGT
CTATTTGTATGTCGCCAGCATAACTCGAGAAGCTGTTGATGGATCCTTAT
GATATTTGGTGGATGGGTAGGATTTACAGAAAGGAAGGTCAAGTTCGAAT
ATGGGCCTTCTAGCGGGTACCAAAGGTACTGCAGCAGAACTTCAAAAATT
TAGGGGCATATTTTCTGAAAGTGCTATGGTCATGATTTTTGTGTGGTAGA
TAGTTCATGCCACAGAAAGTAAGTTCTGTAAATTTTGTTCCCCTAGCGGC
TTGTTAAGAACTGCAGTGGGTGTTTTTGTTTTGACATTCGGACATGAATA
ACTTGAGAAGGGGTCGACAGATCGTCGTGATGTTTGGTATGTAGAGAGCT
CGGATGGTGCTTTACATAATCAATGACTAATTATGCAAATAAGGAGCTAA
TTTGCATAATTAGTAAGGAAAGTTTGTTAACCCACTGCCTTTCAATGGGA
CATGGGACAGTGTCAGGTCATGTAAACAGATAGCCTTGCATAAACGTACA
TGTAGGTCAAATAAATAAACTATTCTCCAAGCAGAGGTGTGGGTCCTGCT
GGTTTTTGACGCGTTCAGTTTAAGCATTTTTGTTCAACACGGTTGGCGAC
ATAACGAAATAGGGACAAAATAGAAAGCCTGACTAGAAACACCTAAAAAC
GTGCCAGATTTATTCTATTCATATGCATTGACTGTACTATTTCATCATCA
CTTTCAACTTTCAACACTGCCATATCGAACCTTTGTGGCCCATATAATAT
CAACATACTCATATTTTTTCATGACCACTTATAACATTTATCAGCACACT
CTACACATATACTAGTCCTGTACCACCAAATGATTTTTAACCCTATCTAG
ACTGGACTCATTCGCCCAATCATAACGTCCAAATGGTTTGGTGCATGATC
AAATTTGCAGGGGGTGATAAGCACGTAAATCTTAATCACTTTCCATAATA
AGCCTTGATTATTTGGCGAAGATAATGTGTTCGTGGAACTCTAGTTTTGT
TCTTATTTTACATTTTCCATTTCGTCTAACATCTTATTTCTGCATGTAGA
AATNACCCTATATTTACACATCTCTACCGGGTAAATTTGTTGTATTTGTG
GGTAAATGTTATATTTGACATTGTCCGGTAATTTACATACCCATGGTAAG
TTTCGTGTAGTGGTAGTACAGTGGTTTCCGCACTCTGCGTCTCACTGCAT
CTGGTTCAAATTCCGTGGGGTCAGCGGTCCAAGTTCACGCCCACGGGACT
GAACACGACTGGAAAAGAGTGACGCGTCGTTCTATCGGATGGGGAAGTAA
AGCCGGCGGCCCATTGCATGAGATAGCTTCAGGGTGTCAAACCTCTGCAC
GTAAAAGAACTCAACATACTTGCCGAGAAGAGTAAGGGTGACCCGGTGTG
CTTGGTAAAAATATGCAAGCCGTAACGAAACTGCATTGCACTGATAGCTA
ACAAAAAATCCATGCTTCGTCCTCAGTCTGAGGTTTGACCGCTTTATCTT
TTTATATATCATCCGATACCATTGCATTTGAAATGCCGTGACAAATGTAG
ACGTTCTAGTGTCTAATTTTTAAAGTTTTAGTTAAGAATTAAATTGACCA
TTTGCTATACGTTGAATTTATGTCGATAATTCTATATGGAATTTGAAAGC
CATATTATATGAAGCAATGAATAGGCAAAGGTAGAGAGCGTTGGGTCTAG
GCTCACAGTAGATTCATATGAAAGTGGTTTCAGAGCCAAAAATACTTTAT
ATGACTTAACTCATAAGCCGGAAACTTGCAGCTTATAATCTAACGGCTAC
ATTACATCTGCAACGAGCAAGTAACTAGAAAGCCATGCTAATCTAATCCT
ACACCACTTGAATTTTTGGAAGGCTTGTCTTTTCTCCACCCTCCCGAACA
GGCCCGCTATCGCTCGGTAACGTTACCTCCCATAGCGGCCCTGCCCTTTC
AAGCCTGTAAAATCGCTTCTGGCGACGTTGTTGACAGTTGCTTATGACTA
ATTAATGAGCTAGCATTATTTAGCACAAACAGCTGTTATTTTTGCTCTGA
ACCCAAAGTAGCGATGTAAGACGTAACCCGATTGGTTGATAGCATTCCAG
TGCCCTTTGTGCTTTTACTCTAGATGAGCTTAAGCCAACCCTCTGATTGG
CTGAAAGCTGTTTTGATGGTGACGTCGCCAGAAGTGGTTTTACAGGCTTG
AAAGGGCAGGGCCGCTATGGGAGGTATTGTTACCGAGCGATAGCGGGCCT
GTTCGGGAGGGTCACGCTTGTTTCATGTCTTTATGCTACAGTGCCACAGT
AGTAAGCTTTTTTAAAATTTTGGTAATGTTTTTTTTTACTAAATGTAGAG
GCTCTGGAGTGCTACCACGTCATTAAGACAGCCCAGTCGGTCGAGTTGAG
TGTCCAGGAAGCGATGGACTGCTGCGGCGACTCTACACTGTCCACCGGGT
TCGACTGTATCATCAATCGGACCGAAGGGCTCTGCAGCGCCGCCGACTAC
CCGAGCCATGCCGGGACCTGCGTCGCCTACTTCTGTCACGCTGAAGCAAA
TGTGAGAAGAACACTGCACTAAATGGCCTCGGATCCCGGTGGATACGTAA
AGGGATTCCTCTGGAAATATTCCAAAGCCCGTGCGGATTTAGTCGGATCC
GTTAGTTACGTTGGATCCGCCTGTATCCGTCAGTATCCGTTAGTATCCGC
CAAAAATACAGAAAAATCCCTCTACGTATCCGCCGGGATCGGTCATTTCG
TGCAGTGGAAGTCTGACCAAGGGGCTAACTTAGACATACCTAAACTCAGG
ACCTAAACTAGACTTATAAAACGTTTAGGTTCAAGTCCAAAAAAACTTAA
ACGTCTAGGAACCAGGTCCGGACTTGCAAAAAGGTATCTCTAAATTATAT
TTTCCTTTTTGTTATAAGCCATATAAATCCTTCCATAGATAGTGAAATTT
GCACAGGAAAAAGACGAAAACATTGCTGTTTTTGTGTTAATGTATGAGCT
TTTGTATCTACTACTGGCTGTATATAACTTTGCAAGTATGTCTTTCAAAC
GTTAACTGTATGTTGATTTTATGTCAACATGGAATGTTGCATATGTCATG
GGTTCATACCAGACCTGGACCCGAACCGCTGGACTTGAATCTGGACCTGA
AAATGAGTTTAGGTATGCAGCACTATCCACGCGTATTGCTAGGGGCACGT
TTCCGAACCAGGGCCCAGCGGGAACGAAAATTGAAAGTGTATATCAAGAA
ATATACACAAATTGTGCTCATGACTTATTCTTTTTACGTTTTGTGTTCTT
GTGTCTTTTATACACACTTTTTGTTCCCACAAACTGGCCGTCCGGGCCCC
AATTTGAAAATGTGAACCTATATGATCCTATAGTCTAGCATAAAGCAGTG
TCACTGTACTGTAGCATTGTATTTCAAACATATGTGAGAATGTATTGTTC
GATTTTTCTAACACAAGAAACCATCCTGTAGCAGTAAACAAATGTTAAGA
ATTTCTTTCCTGACATCTGCTTGGAGATTATTGTAAGATGCTTTAGAGTT
TTGTCATCGAATTTCAATATAAAATCTGACATATAAGACAACACCATTTT
TCTGCCATATCAGATTACAAAATTCAATTCTTGCAATATGATTTTACATC
CATATTCAAATCTCTGTTCGTCTCAGTGTAAAGCCACTGGTCACGTGATC
AAGAATAACGAGACTGATTTGATGTGCGCGGTTTCCATGACTCCCACGGT
TGTCGGCATAGACGCCAGTCAGACGTCCATGACGTTCTACAGGTAAGACC
ACAGACTATGTCCTTCATGCCAAGATAGTGTTGAAGACGAATTTCACTTT
CTAATGATATGCCCTACCTATAATGATGAAAGACAAAAGTTGATGCAATT
GATTTCACGTAGGCCGAATACTTTTAATGAACTTTTATCTTGTCCATATT
CCTTATCTATCCACAAAGGCCAATGCATTCATAACGCTTTGCAAAAAAAG
AAACTGTACCTATTCCTAAATAAGATTTGACAAATGTAACGTCGCAAAGT
AGCCTAGAAATATGCAATGTGATATTTTGAATAGTTCCTATTAGTTAGCA
CTGTAGATCTTATTTGATATAATAATTATTATAAAGTAATTAGAATTGTG
GTAAAATAGACCTACATTGTAAATTATGTTATCTGTACGTTGCCATACAT
TGCCATATTTCGTCACCGATGCAATTATTGCGCAATAAAATCATTAATCC
ATACAAGGTCCGGAATCTACCACGACACCCACTGCTCGACCTCTGACCTC
AACCACGCCCTTCTCGTGGTGGGTTATGGGATTTCTGGAGGTGTAGAATA
CTGGATCTGTCAAAACAGCTGGGGTAGGTTATTAATTTTTTTTCTCTGTC
ACTTTTTCCTTATTCTTTCTCAATCGTTGATTTTTCTGAAGTTAGAGGAA
GCGAAATGTTGTTCCTGTCCAATTCCGATATAACCCGTTACCCTTGGGCC
TCGATATGTGGTATTCACCGAGTCTAGGAAAAATAATAAAGAATACGGGT
AACGAAAAAAAGGTGAGAATTGTGACCCAGTACATCAGTACACCATTAGG
GCGTCAAACCTCTGCA Coding sequence (CDS) from alignment at Sc0000087:198135..206300- >Blg03354.1 ID=Blg03354.1|Name=Blg03354.1|organism=Branchiostoma lanceolatum|type=CDS|length=1020bp|location=Sequence derived from alignment at Sc0000087:198135..206300- (Branchiostoma lanceolatum)
ATGGCTGGACGGTCTGTTGTTGTGTTGTGTTGCTTCCTGCTTTTGGGGGT
TCAGCATATTGCCGAGGCTGACGACAACTATCTAAGTTTTGAAGCAACAG
ACCATGATCGTCTGTGGGAGGTGTGGAAGTATTGGCACGGGAAGACCTAC
TCAACAGAAGATGAGGAAACAACGAGAAGAACCATTTGGGAAAAGAATAT
GGACGCCATCTTTGCCCACAATGCAGCGGGAAAAAGTTATACTTTGGCCA
TGAACAAATATGGTGATCAGATTCAACTTCCCAAAACTACAAATATCATC
ACAAACGAGGAAAAGTGGGAGAGAGAAAACATGGACCGAAGGCGTCATTC
CGTTGCCATGGGAGCATGTGGAGGGACCACGCCCCCTTCCTCCCTGGACT
GGCGTAAGAAGGGTGTGAGTACGGTGGTGAGGACGGAAGGGCAGACTGGG
AAAGTCATCCCTTATGTACTCACAGAGGCTCTGGAGTGCTACCACGTCAT
TAAGACAGCCCAGTCGGTCGAGTTGAGTGTCCAGGAAGCGATGGACTGCT
GCGGCGACTCTACACTGTCCACCGGGTTCGACTGTATCATCAATCGGACC
GAAGGGCTCTGCAGCGCCGCCGACTACCCGAGCCATGCCGGGACCTGCGT
CGCCTACTTCTGTCACGCTGAAGCAAATTGTAAAGCCACTGGTCACGTGA
TCAAGAATAACGAGACTGATTTGATGTGCGCGGTTTCCATGACTCCCACG
GTTGTCGGCATAGACGCCAGTCAGACGTCCATGACGTTCTACAGGTCCGG
AATCTACCACGACACCCACTGCTCGACCTCTGACCTCAACCACGCCCTTC
TCGTGGTGGGTTATGGGATTTCTGGAGGTGTAGAATACTGGATCTGTCAA
AACAGCTGGGGTAGGTTATTAATTTTTTTTCTCTGTCACTTTTTCCTTAT
TCTTTCTCAATCGTTGATTTTTCTGAAGTTAGAGGAAGCGAAATGTTGTT
CCTGTCCAATTCCGATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03354.1-exon-Sc0000087-1570713199:205997..206300 | Blg03354.1-exon-Sc0000087-1570713199:205997..206300 | Branchiostoma lanceolatum | exon |
| Blg03354.1-exon-Sc0000087-1570713199:204680..204849 | Blg03354.1-exon-Sc0000087-1570713199:204680..204849 | Branchiostoma lanceolatum | exon |
| Blg03354.1-exon-Sc0000087-1570713199:203697..203901 | Blg03354.1-exon-Sc0000087-1570713199:203697..203901 | Branchiostoma lanceolatum | exon |
| Blg03354.1-exon-Sc0000087-1570713199:200200..200402 | Blg03354.1-exon-Sc0000087-1570713199:200200..200402 | Branchiostoma lanceolatum | exon |
| Blg03354.1-exon-Sc0000087-1570713199:198959..199074 | Blg03354.1-exon-Sc0000087-1570713199:198959..199074 | Branchiostoma lanceolatum | exon |
| Blg03354.1-exon-Sc0000087-1570713199:198135..198493 | Blg03354.1-exon-Sc0000087-1570713199:198135..198493 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:198135..206300 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03354 |
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