|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:1076868..1084645- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00363.2 ID=Blg00363.2|Name=Blg00363.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7778bp|location=Sequence derived from alignment at Sc0000086:1076868..1084645- (Branchiostoma lanceolatum) AATGTCACAGGACCACGTATTTTGTCTGTAAAGCTATGGTCTATATTTGT
TTCTTCAGTTCGTCTAGTGAAAAAATATACTCAGGACTCAGCTGCTATCA
TTTTGCCGTTCGTATTCCCTTCGCTAACAAATTGAATTGATAAAGGACCT
CACCGTTCTTTCAGATCCTGCAGTTCCGTTGACAGCTTCTCATTCTGTGA
ATACAGGTGGGACATTTTGTCGCTACACTGGCTGGCGACCACAAAAACTA
ATTGATTTGCGAGTTGCATTGCCCAGTCGTTCATTTCCCTGGCATGTTTT
GAAGTTGTTTCACTTGGCCCTGCAGGAATACCAGGCATCTGGTGCGCCAT
GCCAGGTCTACCTGCCATGACTGAAGGAATCAAGTGATCCATGTACACTT
CGAGCTGACTTTATCCAGACACACAAGTTGTCGAGCAGGTAGAGAGAAAG
TCAACTCCGATCAAATATACAAAATTGACACGAGTTGCAAACGATCAATT
CGTTTTCATACACATGAAATAGGATATCATTTCGTTTGAAAGTAAAATGT
CCCAAATCATAACACTCTTAATGACATAGCAGCATAATAAAGGGTTTCTA
GACGTATACAAGGTGAAAGATATATCAAATAGCTCATGACGTAATGTCTG
CAATAGAGATCCCAGTGGAATAATGCACTCATAACGCAGAAAGGGGCGGT
ATAACCCGACGGTGCGTAAGCACGTCGACTAATGATGATGATGAACGCAG
TAAACTTGTCTCGAAATAGAATGTAGACACATATTGTGAGCATCACTTGT
TGGCAACTTACACAATATATATGAATTAGATGATACAAAGTTGGTGTCCA
CCTACAAAGACCCTCTTTTCTCCTAAATGCCTGGTCAAACAATTACGCCA
TATGTTTAACAAGCACTCTGAGAGGCGAACCTGAATCGACTATGGGGATT
TAGTCACTCGAGTTAGAATTATTTTGATTTTGATATAGTTTTTTTTTGCA
TATTGCAGGATCCTTCCGAATCTGCCTGAAAGGCCTGCGTTTTACAAATC
TTGAATAGAGTAGCTATTTATCCCGAGGCGGCTATGTTTTCAGAGAAGTT
CGTTTGTGAGGAAAGGGAATGATTATGGGTTTGTTTGTGAACGACATATA
ACTCAAGAACCGTTGAGGTAAGCTTGCGATCAGGCCTTTACTCATTAAAG
AAATTGAGACTTGATAACCATGTTGAATTCCACGGTCTCACAGAAGAAGT
GATAGAACACTTGTTTTCTAAGAAGCTTTCTGTGTAACCTAACTTTAGTA
AAAGTCTCTTAAACTGGATGTCAAGTTGTTTTGGCCCGAGTAATCTGGCA
AATGAACCCATAAGTACATACAGTGAACAAACAGTTTGGGGGGCGTTGCA
GTGACTTACTATAACAAGACCCGATATCACAAGACTCGATATCACAAGAC
TCGACATCACAAGACTCGATATCACAAGACCCGATATCACAAGACCCGAT
ATCACAAGACCCGATATCACAAGACCCTTTATTATAAAATCACTGTAACA
AGACAAGGTGGGAAGCAGCTCGAATATTATTTTTGCATGCGATTGCACAT
TTTCTTGAACTGATTGATTTTAGTCAGTGAAGAGCTAGGCTTTTACACAT
GTAGTGGCTACTGTTCAAAAGGGGACAAGGATAACAATGGCCAAACAAAC
TAGCAAGTACGTGGCTGTGGTGGCCATTGACTTTGGAACCACATTCAGTG
GCTTTGCATTCTCCTTCAACCATCGTGAAGGTGAAAGGGGGATATTAGTG
AACAAAGCGTGGGGAAGTGATCAAGGGTACCAAGCGTTAAAAACACCGAC
GTGTTTACTTCTTGACCCCGAGCAACGCTTCAACAGTTTCGGCTTCGATG
CCAAGGAGAAATACGCGGGGCTTGAAGAAGGACTAGACACGGAGTATTAC
TTCTTTGACCTATTCAAGATGAATCTATTCAAGGAAGGGAATGAACAGGT
GAGATTGATCTGTTATACGACCCAGGGCCAGGCTTTTCATCAGAAGCAGT
ATAGTGCCCGCAGTGAAATGCTAAGCGTTCAAATACATTTTTGAAAAACC
GAAAAAAAAGACATTACCGGTGTTAAGAGTTATGTTGTAGATTTGGGTGG
ACTAACAAGATATGTAGATATCATTACATAAGTTGGATTAGCTACGGGGT
GTGCAACCAAAGGAATCTTTTACGTGATCGCTCATCCAGGTCGAATATTT
TCATGCTAGTTTTAACAGCAACTTGGTTTAAAGTTCCTCTGCTTCAATCG
AATAGTGGTCTGATATTTCCAACTTCATTCAAATCATTGTTATTAATCAA
AATGAAATAGACATGATCCACATAATGAATGCTGTGTCTTTAAGTTACTT
AAGTCAACTATTATTGATGTAGAAAATGTAATAGTACAATGATTGACTCC
ATTTTTATTTAATTTGTGCATTTTAACAGTAAGCCAAAAGGTTACGTTAT
GGGTAGATTTTACATTTATATGTATCATACCTGATTACAGACTATCACAA
GCGATATCACCATAACTGCAAGAAACGGCAAACAACTGCGAGCAATTGAT
GTCTTTGCACACGCCCTGTGTTATCTGAAGGATGAGGCATTGAAAGTCAT
GAAAGAGAGGACCTCTGTGAAGTTCACAACAGCCGACATACAGTGGGTCC
TGACCGTTCCTGCAATCTGGCAACCCAGTGCCCGCCGGTTTATGAGAGAT
GCAGCTTACAAGGTAAGATCTATCAGGGTATATACAAACGGGATTTACCG
TCAGACAATGTTACTAGATTCGTCCAAACTACGTGCCCCCCCCCCCCGAA
ACTCCAATACGGGCAACTTTAATCATTTTTGGTCGCCAAACCGTTTTTAA
AAGTAATTCACTGACTACGTCACTTGATGGAAGCCCACGTCTTAACTTGA
CCTTCAGTATGATTTTCGCGATGCCCCGCCTTTATGATGACTTGAATGGG
TAAATTAAGCTAAAATCGAAGTACTTTAAGTCTTCTTGATCTATATGAAC
ATAATGTAAAGAAAATCTCAACAGGAGGCCGGTCGCGTAATCTGCTATCC
TTCTTTTTAGGCTGGGCTGTTAAGCCCCCGAAATCCTGACCAGCTCATCA
TTGCCCTTGAGCCAGAGGCAGCGTCCTTGTGGTGTCGTCAGCGAAAGCTG
GTCGAATTTGCAGAGGAAACAGACGAAGCACTTGTGCGAGATGTTGTAGC
GCGAGATGGCACCAGTTACCTAGTGATTGACTGTGGGGGTAAGGTTCAGA
TACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATATTCGCGGTTTTCGG
CGTGCACTTAAAACCGCCGCGAAACTTTTTGCCCACCTTGGACGGTAGCG
CAATCTATTACTTAATTACATTTAATTACACATTCACAATCCCTGATTTT
GTGACATTACGCTCGCCACGGCAAACGCTATTTTAGCTTACATCATTAAT
CATTATAAACTAAATTGATAAAAGTTGGTACCAATAAGGACATTATTTGG
TACTAAGAAGGAAAATCATCAAGATTTCTCATATTCCTGACTCTTTGCCA
GCATGGATGATCCTTAGCCTTGTCGTTATAAGAAAACCACCAGGACTTGC
CATAGATTTACTTGAGATAAGGGAGAAATCTTATAATGTGACAAAAAAAA
TCAAACGGTTTTTCTTCACGACAGTGCAACATAGACTGTTTGAATGCATT
GTTCACGGAATTTTGTTGTTGCTGTCGTTGGTTTATAGGAGGCACTGTCG
ACATCACTGCTCATCGAATCCAGCCAGATGACTCCATCCACGAGATCTAC
CGAGCGACGGGAGGGGCATGGGGTGGAAGTAAAGTAGATAAGGAGTTAGA
GATGAAGCTAACAAATATATTTGGTGTAGACTTTATCCAACGGTATAAGC
GATCGCACCCATCTGACTGGTTAGAGATCACTGGGGATTTTGAAATGAAG
AAGCGGTCTGAGCGGTCCATTCAAGATCGGTTTACCCGAATCAGACTGCC
AACCAGCTTTGTAAACTTCTTCACGAAAACCCACTTTAACACTCAGCTCA
GCATTCAAGAAGTCGTTAAACAGCAGTGTCCTAACGGTGACGTAGCGATT
AACAAAGACTACCTTTGTCTTAAGGGTGACATTATGAAAGAAATATTCAG
CCCTGCTGTCAATTCTATCGTTGAGCACGTTGACAACCTCCTTCGCAAAC
GCGAGTTACAGGATGTGAAGTATTTCTTCCTTGTGGGTGGGTTTTCAGGG
GCTGCAGCTCTGCAAAAGGCCATCCGAGACAAGTTTAATAATGGGTACCG
TATCTTAGTACCTGCTGAACCCGAAATGGCCGTTGTAAAGGGTGCGGTTA
TGTTTGGGAATACCCCAAAGATCATTCAAAGGAGGATCATTGCGAGGACA
TATGGCGTTAAGGTGTCTAACCCCTTTATAGCGGGAGTTCACCCTGAAAG
CAAGAAGTTCTTAACGAGCACTGGAGCCCCAAAATGTAAAGACATATTTT
CTACTCTCGTAAGGACGGGCGATGCGGTGCTCATTGGCGAAAGTAAAACA
CACACATTTAACCCTCTTGAGCCTGACCAGACAGAGATTTCTTTTGACTT
TTACATAACTCAATCAGAGAATCCAACGTTTGTAGACGAGGAAGGAGTGA
TCCGTGAAGGGTGTAGTATCACGGTTATGAGCCCAGATATCTCAAAAGGT
ACAAACAGGCAAATAGAATTGAAGATCATGTTTGGGGGAACAGAAATCAC
AGTTACCGCTATTGATGTTGAGTCAGGTTCACATGTTACGTCCCATGTCA
GTCTGATCACAAAAGATGGCAAAGGAGAAGAATCATTTTTATCAACATTG
AGCATTGGAGACATAGACGCTTCTGACAATTGACACGCAGTAGTTTTAGT
ACATTTGTGTTTAACCCAACATGCTAAATTTCGTTTGGGTAATCTCATTT
TTAGTTCAGCTTTTTCCATTTTGTGTTATAAAATTGTGTCAACTAATGGA
TCTGAATGAACGCATACAAATCAAAGTCAAAACCCCGCTTTGACTGTATG
TGCCACCAATAAGTCGTTATCCTGTTATGACTAAACTGAGACATAGAAAC
GTATCGATAGATAAAAAAGGCATCTGCTGTTATAAATCTGACAGTTTGTC
CTACAATGATCTCTAGCCAGTTAGTCAATAGATCGTTATAAAAGATTCCA
AGGAATGTAGTCTATTGGAGTATCTAGCTACAAGAGAAAAGTAGGGTTTT
CCCCTGCCATACTTTGGTAGGATGGACATGTAGTGTAATGCTCACCATTT
TAATGAGGTTTGAAATGTACATTTGCGTCGTGGGACATCATTTCTAAGTT
AAATTCATATGTAGGGGGAAATGCATCCATCCCGAGCCCTAACATCCCAG
CATGCATTGCAATGCACATTCCAAAATACACATCCCAGATGGCTGATTGT
GAACAACAAACGCATAGACTTGTCATGTTGCGTACAATTTTTACAAATTT
TATTGTCAAGATAGTAAATTAGTCCATGACACTGACTTAATGAAGATTGT
GCAATAAACACTGTTGCATATATTCAGTTCAATTATGGTGCTTAAACATA
CTACAGTGCAAGTATTGATTAATTTTGTAATACTGATTGTGATTAGTAAA
GTAAAGAAAATTGTATTTGTTTACAATTATTACAAAACAATATCAAATGT
CATTTTCTTTACTTTCCCGTGGGTGCTCTCTGATGGACTTTGGTTATTCT
GATGTAGAAAAGCACTGACGTCTGGTTTGGTACCATAATTGAAGCGAGTA
TTTTCATCAATGTTCCACCAGTGTTTACTATATAATGTTAGAATGTTGTG
CAGAAGTCAGACAATCTCATTGAGTACTTTGTCTTTTGAAATTAAAATTT
ACAGATCAAATTATAACAGTTACTGTAGTGTCAAAGGCAACACGAAAGGG
CTGTCATATTGATAAAGTTGGTCACAGTCAGCCATCTGGAATGTGTATTG
TGGAATGTTGGAATGTACATTGCAATGCACCCTGGGATAGCTTCATTTTC
CATATGCATATGCAATGCTGTAATGGGTCTATTAAAACCATAAGGAGGTA
ATTGAAAAGAATGTGAAAACCCAGGATCTAAAAAACAAAAGATATACGTT
TTAGAGGAGTCCTAAACTCCAGAAGGCGGTGTTTTTCCCACTAGATTATG
TAATAATTGATACATAATCAGTCGACTTTTTACAGAATTCTGCTTGTGGT
GAATTGCACAAGGTGTGTTTTTTAAAACAATATGACAGTCACTAAACCCG
TGCAGACCCTACCCATGTATTCCCTATGCGTAAACATACATCTTTAATCG
TGGATATTTTTGGCATAAATAAGGGGGGTTAAGCACAATAAGAAGGCCAA
TTCTTAATAAGATATAAAAGAACACATAGCAAGACGAGTTTTTTGTTAAC
CCCCTGACATTCTTTTTGTAATCTAACTTTTGTTAGGCTTTGTCAGGCAA
TTTGGGGAATTCGGTAGAATACTGAATGCTTTTTGATGCGCACGGGATTA
GTGGGTACTTTATCGTATACTGTAAAAAGTATTCATTTTTACTTCCTAAA
ATTATCATCTATTGGAAAATAACTCTCCCCTCTGGAGTTTAGGACTCCTT
TAAGAGTGTCAAGTTGAACCCAACTTGTAAATCACCAATGCTGGGAAGAC
ACTGGTAACATGGTTCAGATATTACAGTCTCCATGGCTTTTTGGCTGATT
TCATAAACAGAATAAGAAAATAGTATAAACAATAGAATTGATAAACAATC
GAAAAGGTCCGTCCAAAATTTCAGCATTATAATCATTGAATATCATATTC
CGGTAGTCAAAACAACTTTTTAGCTGATTCAGTAGAAAGTTTGAAGACTG
TTGTGATATATCATAATCAAACCGAGCTAAAATAGGGAGCTTTTACGTCT
ATGGTAGAATCCTGCTGGCAAGATCTGAGGGGGCTGAAGAAAAAAGTGAG
AAATATGACTGATGGCACAGAAAGAGGACAAAGACCAAGTAAGGTAGAGG
AAAGTAAAAAAAAAAAAATTGATGTCACTATAAGCATGGTATATCGTATT
ACAGTTCTAGTGAATCTTTACGTTCTGTTGCTAAATCGTGTAAATTCAAT
GTTGATAATTGTTAAAAATATTAAAGATTGGAAGTTGATGTGCTGATAAG
ATAAGATGTTGATATGTCAGCGAATATAATTAGATGCTATTTTAACACAT
ACAAATATGACACTTTTGCATTTCTGACTTATGTTTAATGAATAACAATA
CTAGGGTACTTGTATTGTAATATCTATCCGTCAGTGTCGACGTGTTAATT
CAAATCGAATCGATCATTTTGACAACAAACTTAACAGTAGGTATGTTGAT
AAAAATGATCAAGGATATTTTCTACATGTGGCGACGATCTTTTTTACATT
TGTTAGATTTTAGAATGAAGCAATAATGTAAATACAATTCCTAGCACCTG
TATTGCCATATACATGTATGGCTTCAAAATTGAAATAAAATTGAACGTGT
GTCAAGAGCTAAGGATGTGTTGAGTGTTGCTGTTGGAAAATCCATGAATC
CTCAGACAGTTTTCCGGATAGGTACCACAATTTGATTACTATAGTTTCCC
TTAAACCCCTATCTAGCTGGGTTGAAACTTGTTGGCGACTAGTGTGGTTT
GTAGTGCGCCAACTTGTCTCCTGTAGTG Coding sequence (CDS) from alignment at Sc0000086:1076868..1084645- >Blg00363.2 ID=Blg00363.2|Name=Blg00363.2|organism=Branchiostoma lanceolatum|type=CDS|length=1857bp|location=Sequence derived from alignment at Sc0000086:1076868..1084645- (Branchiostoma lanceolatum) ATGGCCAAACAAACTAGCAAGTACGTGGCTGTGGTGGCCATTGACTTTGG AACCACATTCAGTGGCTTTGCATTCTCCTTCAACCATCGTGAAGGTGAAA GGGGGATATTAGTGAACAAAGCGTGGGGAAGTGATCAAGGGTACCAAGCG TTAAAAACACCGACGTGTTTACTTCTTGACCCCGAGCAACGCTTCAACAG TTTCGGCTTCGATGCCAAGGAGAAATACGCGGGGCTTGAAGAAGGACTAG ACACGGAGTATTACTTCTTTGACCTATTCAAGATGAATCTATTCAAGGAA GGGAATGAACAGACTATCACAAGCGATATCACCATAACTGCAAGAAACGG CAAACAACTGCGAGCAATTGATGTCTTTGCACACGCCCTGTGTTATCTGA AGGATGAGGCATTGAAAGTCATGAAAGAGAGGACCTCTGTGAAGTTCACA ACAGCCGACATACAGTGGGTCCTGACCGTTCCTGCAATCTGGCAACCCAG TGCCCGCCGGTTTATGAGAGATGCAGCTTACAAGGCTGGGCTGTTAAGCC CCCGAAATCCTGACCAGCTCATCATTGCCCTTGAGCCAGAGGCAGCGTCC TTGTGGTGTCGTCAGCGAAAGCTGGTCGAATTTGCAGAGGAAACAGACGA AGCACTTGTGCGAGATGTTGTAGCGCGAGATGGCACCAGTTACCTAGTGA TTGACTGTGGGGGAGGCACTGTCGACATCACTGCTCATCGAATCCAGCCA GATGACTCCATCCACGAGATCTACCGAGCGACGGGAGGGGCATGGGGTGG AAGTAAAGTAGATAAGGAGTTAGAGATGAAGCTAACAAATATATTTGGTG TAGACTTTATCCAACGGTATAAGCGATCGCACCCATCTGACTGGTTAGAG ATCACTGGGGATTTTGAAATGAAGAAGCGGTCTGAGCGGTCCATTCAAGA TCGGTTTACCCGAATCAGACTGCCAACCAGCTTTGTAAACTTCTTCACGA AAACCCACTTTAACACTCAGCTCAGCATTCAAGAAGTCGTTAAACAGCAG TGTCCTAACGGTGACGTAGCGATTAACAAAGACTACCTTTGTCTTAAGGG TGACATTATGAAAGAAATATTCAGCCCTGCTGTCAATTCTATCGTTGAGC ACGTTGACAACCTCCTTCGCAAACGCGAGTTACAGGATGTGAAGTATTTC TTCCTTGTGGGTGGGTTTTCAGGGGCTGCAGCTCTGCAAAAGGCCATCCG AGACAAGTTTAATAATGGGTACCGTATCTTAGTACCTGCTGAACCCGAAA TGGCCGTTGTAAAGGGTGCGGTTATGTTTGGGAATACCCCAAAGATCATT CAAAGGAGGATCATTGCGAGGACATATGGCGTTAAGGTGTCTAACCCCTT TATAGCGGGAGTTCACCCTGAAAGCAAGAAGTTCTTAACGAGCACTGGAG CCCCAAAATGTAAAGACATATTTTCTACTCTCGTAAGGACGGGCGATGCG GTGCTCATTGGCGAAAGTAAAACACACACATTTAACCCTCTTGAGCCTGA CCAGACAGAGATTTCTTTTGACTTTTACATAACTCAATCAGAGAATCCAA CGTTTGTAGACGAGGAAGGAGTGATCCGTGAAGGGTGTAGTATCACGGTT ATGAGCCCAGATATCTCAAAAGGTACAAACAGGCAAATAGAATTGAAGAT CATGTTTGGGGGAACAGAAATCACAGTTACCGCTATTGATGTTGAGTCAG GTTCACATGTTACGTCCCATGTCAGTCTGATCACAAAAGATGGCAAAGGA GAAGAATCATTTTTATCAACATTGAGCATTGGAGACATAGACGCTTCTGA CAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00363.2-exon-Sc0000086-1570713199:1082648..1084645 | Blg00363.2-exon-Sc0000086-1570713199:1082648..1084645 | Branchiostoma lanceolatum | exon |
Blg00363.2-exon-Sc0000086-1570713199:1081884..1082105 | Blg00363.2-exon-Sc0000086-1570713199:1081884..1082105 | Branchiostoma lanceolatum | exon |
Blg00363.2-exon-Sc0000086-1570713199:1081358..1081535 | Blg00363.2-exon-Sc0000086-1570713199:1081358..1081535 | Branchiostoma lanceolatum | exon |
Blg00363.2-exon-Sc0000086-1570713199:1076868..1080857 | Blg00363.2-exon-Sc0000086-1570713199:1076868..1080857 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:1076868..1084645 - |
Properties
Property Name | Value |
GeneID | Blg00363 |
|