|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:883002..887776+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00279.0 ID=Blg00279.0|Name=Blg00279.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4775bp|location=Sequence derived from alignment at Sc0000086:883002..887776+ (Branchiostoma lanceolatum) ACGTGCAGGCCACCTGTACAGATAATCCGGCTGTTGACCTTGATGTCAGA
AGTACCTGCACCTGCAACACTGGATATAAAGGGGATGGTCTCGTCAGTGG
GTCTGGATGTTCAGGTATTACTTCATCACCACTTTTTACAAAGGATACAA
TCGTCCTAATTGCTCTTTTCTTTCTAAAATTCATTTTGCCAAGTAATGAG
AGCTGTTTTGATTTCTACCATGCAGACATCGATGCCTGCTTGGTCAATCC
GTGTCATGTAAACGCCACCTGTACAGATAATCCCGCTCCTGCCCTTGATG
CGACTTGTACCTGTAACACTGGATATACAGGAGATGGTCTCGACAGTGGA
CCTGGATGCTCAGGTATCACTTTATCACAACTTTTACCATGAGAATCGTC
CTAATTACTCTTCTACTCTTCTAAAATTCAGTGTTCAGTACTGAGTGTGA
CTATGTTTCCTACCATACAGACATCGATGCCTGCTTGTCTAATCCATGCC
ACGTGCAAGCCACCTGTACAGATAATCCTGCCCCTACCCTCAATGCCAAC
TGCACCTGCAACATTGGATACAGAGGAGATGGTCTCGTCAGTGGGACTGG
ATGTTTAGGTATTGTTTCCTCGCGGTGTAATCCTGAATTAACATAAAAAG
GTGGCTGCCTGTCTGTGTTACCGTAGTTATTGCATCTATGAAATGGTGGG
TGTTGGCTTCGGTGTGATTCAACTACTAATGTCATTGTCATATTGATTTG
ATTAGTTACAACTCAAGTGTGGCTGTTTCGTATTGTATATTACTATACGC
AATCAATAGTACTCAGTGGATCTATATTCAAAATTATTTAATACCATACT
CACCCTCAATCATATTCTTCAGTGTTTGCCTCGGTGAACGTCAGCCTGAC
GCTAACAGCCCCGAGCTCGGTGAACCTGTCTTTATTGAGGCTCTCTATCA
AACAGAGTTTGGAGACGCATATTGATGAATTCTGTGATGATCAATGCGAG
GTGACGTATTTCGATCTCTATATTTGTGTAACATATCCTCTAGCCTGTAT
ATTCAATTTGTATCACTGATTCTACAGTCAGCCGTTAAGTAGCAAGCGTT
CCTCTAGGATATGCGGGAACGCAAAACGCTGCCCAATGCAGAAATGAAAT
AGTGTTGAATCATTACATAGCAAAGATGCATTTTTATTGATTTGTAGATT
GGGGAGATCTTCCTGCACATCGTTACCGACACAAAGCGTGCCCGAAAGAA
ACGCCAAACAGACGACAAAGTTCAGATCATTGTGACCATTCAGCTCATTG
TGTCGGCCAGTCAGGGTGGAAACACGTTGACAGACAGAAAGATGGCAGAG
GATTTACTCCAGTAAGTCAAACATTGGGGTTATGCAAGTATGATAGATGC
AAAATCTGTAGTAGCAAATCATTAAGCATTTTGTTTACGTTCTATATCTT
CTATGAATTAAAAAGCAATGCACTTCTGTAACCGAATATTGTTAGAATAT
TTACATAAACGACCTTGCTTCTTTTTTGCCTCAGGAAAAAGGCAGACCTT
TTGAGGCAACTTGCAATGGGAAATTTGACAGTCGACGTCGATGGCAAAAA
AGTTCGTCTTATTGACAACAGCGGTATGTGATATGTCATCCTCTATAAAT
ATCAAATGTACAATACCATGTATCAACTACATGGTTTCCTCATCGTCCAA
TGTCGAACTGTACGCGTATTTCCTTTTTTAGCTTATTTTCTTTAGTTTAT
AGCCCTTAGCAGTGGGCAAACGTGTTTATCATCCACGGGTATGCACACTG
GTGTCAATTTGTAGGAACAAATGATATTTTTCAGATGATGAAATTTCTTA
TTCTCTGTAGACACCAAGGTTGCCACGTCAGATGCTGCCCCGACCCATTC
GCCTCCCATTGGTAAGTACCATGTGGAATAAGCGCTTTTTATTTTTTTTC
GATGGGCATGGTTTATATTGAAGAACTCTTCAGAACTTTTTCTTTACAAT
GAATTGTCATATATTTGCTACATAAGGGTTCAGAAAAGTGAACCTCGTGC
AAAGTTTAGACGTATATAAGAGATTAATTACAAGTGATAGAAAAACATGT
TTATCGACATTTCCATCTTTATGATAAGAATTTGTGATTTGTTTTGTTTT
CGTAGCGGTATATCACGACTACAACTGAATTCTGAAGGATCCGGATGTAT
ACTTTGTGTATATACAACTGAACATGAAGGGTATCATGCATTTTTATCAT
ATTGCAGTTTCTTTTACTGCAGATGAAGACAAGAAGATTCCCCCGTGGGT
GATAGGAGTAATCTGTTCTGTCGTGGCCGTTATAATCATCATTGCCGTGG
TGACCGTTCTGTTATGCCGAAGGAAACACGATCCAGAGTAAGTAATTCAT
TTACATTGAGGACTAAAGGTTTTAAGTTTAAGCCTTCGGTTTTTAGTAAC
CAGCAGTAGAATTAATATCAAAAGTTCAGCATGATACGTCATCCCCAATT
TCGATGTAAACGTCTGAGAATCTTCCAGTGCAGCGTGATATGTGGATATT
TGACGATATATGATGATATGAAGATATGAAGATATACAAATACATTTGCA
TATAGCTCCTCCATATAAATAGCACGAACTTTTATGATGTAGACTTTTTA
TGGCATGGTTTGCAAAGTTTGTTTCATAACTGTGTTTTGTGTTCACAGTG
CGAATATGCCAGGAAAGAGTGGAAACGAAATGGTAAGTTCTTGATATTAT
GATTTGCAACTTGAACTTGAGATTTTCTCCTAATCTCTTCGATATGTTAA
ACAAGCATAGCCGTTTGCTCTTTTATGTCAATTGTTTTCTCATATGTGGC
GCATAAGTTAGTGTTTTTCATGATAGTGCTTCATGTTCATGCATTGCTTT
GTCTAAAACTTCATCATCATCATCATCATCATCATCATCATCATCATCAT
CATCATCATCATCATCATCATCATCATCGTCTTCTGCTGTTTTTCATCTG
CAGCCGTAGAAAACTTTTGTAGTTGCAATCAGACTTTCTACAATTTTCCT
CACTACGCCTTGCATCTTACAAGCTCCCTTAGCCATCGGAACGAGCACTT
CTTTGAGTCTTACAATCTGCAACCCACATTGTAGAAAAATCTAGGTACAC
CTGCGCGACACGATCACACAGCTAGAGAGGGCTCGGTGGACAATATTATC
TACAACACCGAAGACGAGGGTTTCGTGGACAATGTCATCTACAACGCCGG
CGACGAGGGGACCGTGGATAACGTCATCTACCAAGGTCAAGACCCAACAC
CGAATGAGCCAGAGGTTAGCTTTTGGTTTGTATATCAGCTTCATTTCTGC
AGAACGCAAAATTTCCAACCATAGTCACAATCCATTTTGTGATCACTTCA
TAAAATAACTTGTGAACTGCGTAGTGCCTTATGCTAAACATTATTGGCCT
TTTATAGGCTTGTTTATATGTATAGTTGTAGAAGACCTTACGAAAGTCAC
TGTTACTTTTTTGTTGTGTCAATAAAGATTATGTAATGTATCAGTTCACA
ATGATACTAATGTATCAGTTCACAATGATACGAACTAAGTCTTCAGATAT
GAAAAAGTAGTGATGAACTTTTTCTTCATGTCAGTTGATTATAAGATAAT
TTGCTGCGCGCTAAGTCAAGTGGTACGACCCGTTAATGTACAGTTGAAAT
CTATGTTTCAACCCTGCAGAATGCACCTGAGTCTCAGTACGAGAGTGTCA
ACTAGGGCAGTGATTTCGCGTCTACAGTTGACCAACAGTATCCTTGCATG
GTATCTTATATCAATTGAAGGCCGTTGTCGATTCATAAGTAATTTTATTA
TACATCTATATGATGAGTAACAAATGCATTTAATGGCAATTTTGCAATAT
GGTAAACAGATAGAATACTTTAGGGAGTATAGTTAGTTCAAGCTACCTAT
TACATCTTTAGTTACCATTGATATCGGTTACAAAGAATATACCCTGTCAT
TTGTCCGATAAGCATAATCTAAAACATGAATATTTCTTACAAATTATTTA
ACATTTTATGATATGATTAACATATTTGGCCTGGTTCTATTTTGTGATGT
ATACAATCACAGCTATGAGATCAGTATACTCTCTACAAATATAAAAATGT
ACACTATCTATACAATCGTATTGTAGCTCAATTCATATCAAAATCTTTTG
TAAAACGTGGTAATTTCTAAACGTTCCACAATCCATGAAATATACATGTG
TGTTACATAGAATACACATTCTGTATAAGCATTGCATATGGGACTGGGAA
TAAGCTGTTTCTTAAAAACGTATACGTATCTTATTCGGAGACATTTCAAG
TTTTAGTAATGATTTTCACAGGTGGCATCTTCAGCCCCAATGATGACAGT
GTCCAAGGTTGAGGACAGACTCTCAACAGCGTGGCTTTGGAAGTTGCACT
CTGTGAAAAGAAAAAAAAATCTCTCATAATCTTTATCAACACATTACTGA
AATAAAATTATCATATTAGGACGACCTGTCTTTAACTTTCTTTATTCAAT
GTGAAGCACACATGGTCTCTTTGAGACACTTTCATGATAAATGGATTTAT
AGCTCATGACAATTTGGTGGAAATACATTCCTCTAATGTTCAGACCTAGT
GTCTAATTCAGTACTAGTGCGATTTTAATATAGCTGTGTGGGCTATTCAT
CCATCGGTATAGAGCCATAAGGTCATAACCATGGGTTAATGAAGAAAAGA
CCCGTACATTTATGATCGACCATTA Coding sequence (CDS) from alignment at Sc0000086:883002..887776+ >Blg00279.0 ID=Blg00279.0|Name=Blg00279.0|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000086:883002..887776+ (Branchiostoma lanceolatum) ATGCGACTTGTACCTGTAACACTGGATATACAGGAGATGGTCTCGACAGT GGACCTGGATGCTCAGATTGGGGAGATCTTCCTGCACATCGTTACCGACA CAAAGCGTGCCCGAAAGAAACGCCAAACAGACGACAAAGTTCAGATCATT GTGACCATTCAGCTCATTGTGTCGGCCAGTCAGGGTGGAAACACGTTGAC AGACAGAAAGATGGCAGAGGATTTACTCCAGAAAAAGGCAGACCTTTTGA GGCAACTTGCAATGGGAAATTTGACAGTCGACGTCGATGGCAAAAAAGTT CGTCTTATTGACAACAGCGACACCAAGGTTGCCACGTCAGATGCTGCCCC GACCCATTCGCCTCCCATTGTTTCTTTTACTGCAGATGAAGACAAGAAGA TTCCCCCGTGGGTGATAGGAGTAATCTGTTCTGTCGTGGCCGTTATAATC ATCATTGCCGTGGTGACCGTTCTGTTATGCCGAAGGAAACACGATCCAGA TGCGAATATGCCAGGAAAGAGTGGAAACGAAATGCTAGAGAGGGCTCGGT GGACAATATTATCTACAACACCGAAGACGAGGGTTTCGTGGACAATGTCA TCTACAACGCCGGCGACGAGGGGACCGTGGATAACGTCATCTACCAAGGT CAAGACCCAACACCGAATGAGCCAGAGAATGCACCTGAGTCTCAGTACGA GAGTGTCAACTAGGGCAGTGATTTCGCGTCTACAGTTGACCAACAGTATC CTTGCATGGTATCTTATATCAATTGAAGGCCGTTGTCGATTCATAAGTAA TTTTATTATACATCTATATGATGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00279.0-exon-Sc0000086-1570713199:883002..883115 | Blg00279.0-exon-Sc0000086-1570713199:883002..883115 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:883227..883364 | Blg00279.0-exon-Sc0000086-1570713199:883227..883364 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:884199..884362 | Blg00279.0-exon-Sc0000086-1570713199:884199..884362 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:884536..884624 | Blg00279.0-exon-Sc0000086-1570713199:884536..884624 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:884862..884912 | Blg00279.0-exon-Sc0000086-1570713199:884862..884912 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:885259..885388 | Blg00279.0-exon-Sc0000086-1570713199:885259..885388 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:885700..885733 | Blg00279.0-exon-Sc0000086-1570713199:885700..885733 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:886173..886315 | Blg00279.0-exon-Sc0000086-1570713199:886173..886315 | Branchiostoma lanceolatum | exon |
Blg00279.0-exon-Sc0000086-1570713199:886721..887776 | Blg00279.0-exon-Sc0000086-1570713199:886721..887776 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:883002..887776 + |
Properties
Property Name | Value |
GeneID | Blg00279 |
|