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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:598473..606005+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00270.0 ID=Blg00270.0|Name=Blg00270.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7533bp|location=Sequence derived from alignment at Sc0000086:598473..606005+ (Branchiostoma lanceolatum) CGATGACAACTAAATTTTACTTATTTCTAACAAACATTTATGTATCCGAT
GGATAAATATGCACTACTGTTTAAAAAATTCACCTTTGCTGATAGTGGAC
TAGCCCAGCCGTTAACCCGGAAGTGAGGCGTGTTTCCTTCGCCGGGTTAT
GGGAGGGCGTTGGTTCCTCCGGCAAGTTCAACAAACGATTTTTTCCTCAC
CACCGTCGTTTCCCCCATGAAAAATTTTCCGAAGCTCGCCATCGATTGAA
CGGGTATGTCAGAGAAGACCAAGCAAGTGGCCAAATGGCACGGAGCCTTC
AAAAAAGCAACGGACTTCGATTCCTGGGGCCAGCTAGTCGAGGCCGTCGA
CGAATATCAGATGTCAGTATCTAGAGAGAGAAGTATTTTGTTTTGTTGAT
CTAACGTCAGAGATCTCAGTCTAATTCATCGTAATTTGGGAACCTTTTGC
CTGTTTCAGAACAAACTACAAATTTTTAGAATTCAGATGATTGAAAAAAG
GATTAATCCAATTTTTTAAAATGTGTAAACTCTTTTGTGTGTGTTACCGT
TAATCAAGGAGGTTAAAAAAGGACATCCTTTGTATAATTTCTCCCGCTAT
GTTATTGTTGTGGGGGGAGGGGGGGATTAGAATTCTCCCTTGCTTGTGCC
GATCATTTTCATTTTTTATACCACCCCCAAAATATTCCCGAGTGCCCCAC
CCTATATCTATAATTGAATAGAATAGATCAATATTTGATTACAGTCATTA
ACTGCATTCCTTAAATCAAATTAGATTGTTTAGAATCGAATTAGTTGTTC
ATTTAAAAAAAAGATTCTTTTTGATAAAATGATTTTGTGTAGTTAAACAT
CCTGTCAATATTGCAAAAAAATACTTACTGTCCGAAACATCCTGTCAATA
GAACTTCCTGTCAAAAGCCATGTCTTAAAATGCTTATTGCAATGATCCTT
AAATAGATACCATATACAGGAAATGAGAAAGACAAGACATGAAAGTGCGA
ATCCAACTGATTGAAAGTAAATTACATGATCAAAGATGTAAAAAAAATCT
ACTACATGTAACGTTTAAGTATTAACAATATCATCTGTCTGGATACCCCC
CTCCCCTTCCAATAATTGTACCAAAAGCTGCATGTTGTAATTTTCCCTTG
CGTCAAATCCAAGTTAGATATGCTGTTCAGTTTCAACAGTTTTACTTGAT
GAATGAAGCAAAGGAAATAAACTTTTTTCTCTTGTGCTTGGCAATTTGGA
CTAGACAAGAGCCATCTCTTATTTGATTGATATACTTATTGCAGTATCAT
TTGACCTTTTCTCAGGACAAGTGGAATTATCTGCTATGTTCTCTCCCAAT
GAAGGGTGAACATTACTACAATATTAGTAGGGACACACCCATGACAATTA
TATTACCTCAAAGATAAAAGTCCATTGTCTAATTACGTTTTTGTTCCAGG
TTGTCACGGCATCTGAGAAAGGAAGGTTCATCGTCAGATTCACGCACGTA
CACAGATGACCAAAAGGTAATAGAATGACCTCAACTAATTGTTTACTGTG
TTGAGGCTTATAATAAAGAACATGAATGATTAATGACTCATGTATGAAAG
GAGTGTACTAGTACTCTATATATGTTACATATCGTATGTCTGGCTGTTAA
AAAATAATGCTGTTCAAATACAAGATGACACCAAAGGATTAATTGTCCTT
TAAACAATTTCATTTGTTAACAGTGCAATATGTTAAGGGATCAAAACGCT
CACATGTAATTTGCAGAAAGAATTTGAGAATGCAGAAAAAGGATGAAAAA
AGCATGAAATTTTGCAAGGTAACAAAATACACATTCTAGGTATCATGACT
CACGTATTGCAAGAAACAAGAAATATTTAGTATGTCAAGACCTGAATGAT
AAGACCTAACCTATCTTTTCAGATACATCAAGGGCTAAGAAGTTTGGCAA
ATGTAAAGAAACATTTTAAGGATTAGAGCCTTCCAATTCAATAGGCTTTA
GATAATACCTTTTGTATGTATGTCAAGACTTGACAGGCATGACGTATATG
TTGTCACACTGTTAGCTAAGGTCAGTGTGCCGTAATAATGGTTATAGTTA
GACCCTTGGCCTGAAACAGGAGGCTGTAATAAAAGTGTAAAGTGTTTCTT
TGTTTGTACTTTGTATTTAAGGGAGTCAAATTGATAATTGCATTAGGACA
ATCGGATGTTTGATACACTAATGGCAGTTAGATTTCCAGGTAAACATTAT
CTACAGACAAATTTATCTCTACAAGTACAACTAGATAGTAACTGTATTTC
ATATAGTAATCCAGAAGAAGAGTGCAAAAATCAAATTAACTTAAACTAGT
TAAAGCCTGAAACATGGCACAAATGTTGAATGCAGGATCATAAACGATTT
CAGGGGTGGAACCATTACATGGCAACTGTTGCTAGGCAACTTATCTTTCC
TATCAACCAGTATTAGGATGACAGTGGTTCTGTATTAAGATACTGTATTT
TGTCTTTCAGAGAATCCTTTCCAAAGTGTCGACATGTTTAGACTTGAGAA
GTCAGGCCCTGCAGGCTGCCCATGGTACCAGCCTGGAGGACTCCTTGTCC
CTGGAAGAGCTGAAAAAAGTGGAACCAAGTACGGCTTTCACAAAAACCTC
CCGCCATGTTCCAAATGCACCATTTGAACAACATTGTATAGCTACATATA
GGTCATACTACTTATTTGATTGAATTGATGACATCCTCTGAGATCCAGAA
ACCCGATGCAATTGTATTTAAAAAAAGTTGGGGCCGCAAAAAGTTGTCTT
CATTATGAATCTAAATAACTGGTCAGGAATTTTGAACAAATGACTGAACA
CACAGAACATGGCATACCAAAGAATGAATTGTTTCTTATTGTTCTTTCAC
AGCTTTTTGATTTTGGAAGATTTTGCTCATTAGTAAATGTTTTCCAATAT
TTTTTTGCACATCACGACATATGTTATACAGTAAGGTCGCAAAGTTTTTT
AAGGGGCAAAAATTTATGCATGCACGATTTGATGCAATATTTCAGTCAGT
GTGGCCATACAGTGCACCAGCTTAAGTCTAGCAAATATAGGCTTAGTTAC
ACCATTTCAAAGATCGTTTTTCTTCTTTTGAATTTTGAGCTTGCAATGTT
TAACTTCTGTTTTTGTGTGTGCTTCTTTTGTGTTCTTTCTCTCAGTGTTG
AAAAATTTACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGTCTCACA
TTTCTCCCCAGTCAGGTACGCACTTCATAAAGGCTACAAAGATTGTTATT
GTTTATATTTGCATTTAATTTGTTTAACTGTTGTTTATGAAAACCTACTT
CTGCACATATTCCAAATTCGAAAGAGAATGCATATTTATATGGTTGTCAA
CTATTGTTGAAATTGCAGGACCTATAGAAATTAACAGTTGTGCCTCTTAT
GCTAGTAATAAAAAACTGTTTTTCTCTTGGATAGAACGTTTGCAAGTGAT
TCTGATCATTTGTGTTTTTTTTTTCTATATCAGACTGACATAAAACTACC
ATTCTTCAATACTTGTTCAGTAAAGCACTAATATTTATTACACAGGAGAC
CAGCAGGTCCTGAGGTGGACATCAGTGTGTTGAATTTAGATGGGGAGGAG
GAGGAGGAAGAGGAAACAAGAGGTGAACGGACCACACCCACGACGCCCAA
GCCAACCAGTAAGTCTGTCCATACTCACAATATGTATTTGTCACTTACTT
TTTGTTAAAGGTGCTACTGGCCTAAATATACAGTATACTGTATTTTTTGT
GATTATCATAGTTCACAAAAGACGAGTATCACCTTAAAGAATTACAGATC
TGATGTTTGGCATCTTCTCATTCTAGATATTGGAATGGATGCCCAGATAA
GTACAAGGGCCAATCAGGTTGGCTCTACTAATACCCAGGCTTTGTCATGT
ATCTTTCAAACATGTAAATTTCTGTGGGGGCTAATCTCTTTGTTAGCAGC
TCATTGTCATTTGTTTCTACTATAGATACATGTACTTGATAAACATTGAT
TTCTTCACTTTAACCCCAGGTGGGAGCTTACTTCCACGCCTTCCCCCTGA
GCCGGGTATGACGAACTTGACCCTGAGGATAGAGAGGATAGGACTGAAGG
ACGCTGGTCAACACATCGACCCTTACGTCACTGTTAGTGTGAAAGGTATG
TATGTAGCCTCTCTCTTCTACAGTGTATGTTTCTGATACAGCAGTGGAGA
CTGGGTTTGTCATGGGTCAGTACAGGTTATAGTAGGTGCAGGTAGATATG
AAAATACCTGCACAGGTGCAACCTGAAAATGCAGGTGGTATTTCAAGCCC
TGCAAAAGGTAGAATCAAGGGGATAGTACATTACAAATTATGTGAAATTT
CGGCGCTCAGAACGATACATTCAGAAACAACGCTAACGTTGGTTTCAACC
TCGCACTGATTACACTTTATGTTGAGTGGTATGGTTAAGAGTAACATAAC
ATTAAAATAGCTGGTTATGCCTCACAGAAAAAATCTCGCAGTCTCACAAA
TAAGAGCATGCAATACTGATGTATCATAGTGGTCTTGACAGAAACTAGGA
ATTGTATGACTTCACACGTGACATTTCTTTTTGATATTTTTGTTTAAGCC
AAATTGGTGTCTTCAGTATTTGACTCTTTTCCTCTAACAGTATTTACATC
TAACCTAGCTTACACGGTTAAGTCACTGACACTTAGGATAGAACTTTCTT
GTTACCAAGTAAGTAAAGTATGGTTGGTAAATGTTGAATTGTGTCCTCCT
GTCAACTCCTACACAGATGTCAGCGGCATTGACTTGACAGAGCCACAGGA
CACACCCATAGCCAGTAAGAAAGAGGACCCCTATGTGTACTTCAACGTGG
ACGTAGAAATACAGAGACATGTAGAGAAGATGCCCAAAGGTGAGATACAA
TACGGGAAAATCACTGGGTTACAGTTAGGGGAGGGGGGATATGTTCTGTT
TTTCATGTATGACCTTTTGGTGTATGATAACTTTGATGGTCATATAGTTA
ACTACAATTTATTTGTGTATGTGTTTGGTATTGAAGTTTTAAGTTGCCTT
TGATACATATTTTAGTTCTTGTATTTCAGCTCAACTGCCCTGTCCCCAAA
GTGGAAGGCATCCTTTTGCTCTGTATTTCAATATTCATTGCTGCTGGAAG
TAGACTGTTTCCAGAGTACTCTATTTCATCGTCCTACATCGGGTTATGAA
CAGCACACACAAAAAATTAGACTCATAATCACTTGGCTGTATTGGAATAG
ATTTACAGATAAACATGATATAGTTAAAGGTATTACTTATGATGGAAAAA
CTAATACACTTGTACATGTACATTATGAATTTGAAGTTTACACAGAGTCT
TGTCTCCTGTCTTCTCTTAAAGTTAAGCATCCATAGCTTGACAATTTCTT
TCTTTCACAGGAACAGCAATATTTTTCGAGTTCAAACACTACAAGCCCAA
GAAGAGAATGACCAGCATCAAGTGTTGGGCCTTTATGGAGATGGATGAGC
TCAAGTCAGGTCCGGCCTCCATCGAACTGTGAGTTATCTGTTGTTTCAGA
TTTCAAACAGTTACTGTACCTTTTAACTTTCCCCCTGTTGAGGATTGCTT
TTTGATACAAAATTTGTTTGGCTACGAGTTAGTCATCAGTAGGAAGGTTA
AACTTTTTAACCTTCAACTCTCTATGGATGCACCATGTCATAGTTGTTAC
TCTTGAAGCTAAACTGACAAAGGTTACAATCAAGAACAAGCCAACTGAAT
GCTACTGTGCTTTTCCTAAAGGTGCTTATTATGCTTTAGCAACAACTACT
GCGTATCATAAGATCATGATTGGGATCTTCAATGTTACTTAGACTTCTAC
ACTAAGTAGTGTGTGTTGTGTCCTCATAGTACTGTAACTTAAAAGTATGA
GAGTACTTTGTTTTGCAGTAGGAGGGAAAAGTAGGTGTTTAACATTTGTG
GTGGGCACACAGCATGTTACTGATAGAAAATCTGAATAGCTTAATGTGGT
GTTATGATGTTGCAGTAAGGTCACAGTAACTGCAAATCAATACCGTAACC
ACTGTATTTCGAAATTTACAGTAACTCCAACAGATGACATAAATGAGGGA
ATTTTTGCTCTTCTTCCAATCTTACAGCTACAAGAAGCCGACAGATTTCA
AGAGGAAGAAAGTGAACCTCCTTACGGTCAAGCCTCTCTTTCTGGAGCTC
TACCTTACTCTGACCAAGGACTAACGGCAGTACAATGTTTGCAGACTTGG
GAGAAAGGCAGACAGTAACACATTGAAAGGCACCTTGCAGTGACTTTGTT
CTTATGGCTGTGTTTATCGTGTAGTTTTTATTGGTCTTCATATGTATAGT
GTAACATTAATGCAACTCTGATATTTAGATACAGCCAAGGATAGTTTTGT
TGCCAAATGTGTATGATTGAGCCAAGTCATTCGCACTTGCAGTGGAATTT
ATATATGGAATCACCACAATCATTATTTTGTATCACCGTATTCTTGATAT
TGCTTTCACGATGGTGACTCTAGCGAGTATCTCACAGGACTGCGCCAAGT
TCCGAAATGCTTTTGCAAAGTGGCGCCATTTGGGAAAATTGGTGAAAATC
TTGCCGCAATGATTTGGCACAATTAAGGCGCAGTTTAGTGAGATACCTGC
TTCAATGTGCCTAACATGGGCACAAGATGAAATAGTTACTTGTTTGTTCT
TATTACATGGAGGTTTGTGTACAGCAAGAGTACTGTTGACACCAATTTGA
TTAGTTGGTTCTCAGGTTTTATCTTAAAAGAAAAGAAGGCCTTAAATGTA
CAATAGTGAGGGTCTGAACTTATACTGAGATTTTCCAGCTGTTTTTACAG
AAACTGATGTGAAATTGTTGGTAAAAATCATTTGAGGATTTCAAATATAC
TCTACTTGTAGCAAGAAACACATAAAGCTCTTAGAAAAATGGACTATAGT
GAACCTATTTTCAAAATTATGATACTTGGATATGGTTTGCAAGAAACAAC
CAATTGAATTGGTGGCCTTATGGAAGTGTCATCAGATTAGCAAAGTTTGC
TATCACATGATGTTACAGTGACTAGTTGTTCTGGCCAGTAGTTTAACTCT
CAGTGTCAGGGAGGCTTGAAAGTAGGCATTATGATTGGACCATGACACAT
AAAGGGTTAACTATGTGTAATATCTCTTTGTAACATTCCTATATTGTAGT
GCATGTAGATTAACTGATATGCCTATCTGAACTAAATCATGCCTGTGAAC
ACTAGAGTTTTAAGTTAAGAGTAGTTTCACTGTTGTATGTGTTGAAATTT
TGCAAGTACTAAAGAAAGCTCTTTGAATGTTTTAGGTTGAGCAAGAATGT
GCCTGGTATTGTATATCATTCAGCCAAAGCAATGTGTGGAGACTTTATAT
ATATTTCTCAATCTGGAAATGCTGGCAAATACACAATGAGTAATATGAGA
CTTAATAAAAGATGACATTTTAGATCACTAAAA Coding sequence (CDS) from alignment at Sc0000086:598473..606005+ >Blg00270.0 ID=Blg00270.0|Name=Blg00270.0|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000086:598473..606005+ (Branchiostoma lanceolatum) ATGTCAGAGAAGACCAAGCAAGTGGCCAAATGGCACGGAGCCTTCAAAAA AGCAACGGACTTCGATTCCTGGGGCCAGCTAGTCGAGGCCGTCGACGAAT ATCAGATGTTGTCACGGCATCTGAGAAAGGAAGGTTCATCGTCAGATTCA CGCACGTACACAGATGACCAAAAGAGAATCCTTTCCAAAGTGTCGACATG TTTAGACTTGAGAAGTCAGGCCCTGCAGGCTGCCCATGGTACCAGCCTGG AGGACTCCTTGTCCCTGGAAGAGCTGAAAAAAGTGGAACCAATGTTGAAA AATTTACTGGATGCCAATCCAGAGGAGTTCCCAGTCCAGGTCTCACATTT CTCCCCAGTCAGGAGACCAGCAGGTCCTGAGGTGGACATCAGTGTGTTGA ATTTAGATGGGGAGGAGGAGGAGGAAGAGGAAACAAGAGGTGAACGGACC ACACCCACGACGCCCAAGCCAACCAGTGGGAGCTTACTTCCACGCCTTCC CCCTGAGCCGGGTATGACGAACTTGACCCTGAGGATAGAGAGGATAGGAC TGAAGGACGCTGGTCAACACATCGACCCTTACGTCACTGTTAGTGTGAAA GATGTCAGCGGCATTGACTTGACAGAGCCACAGGACACACCCATAGCCAG TAAGAAAGAGGACCCCTATGTGTACTTCAACGTGGACGTAGAAATACAGA GACATGTAGAGAAGATGCCCAAAGGAACAGCAATATTTTTCGAGTTCAAA CACTACAAGCCCAAGAAGAGAATGACCAGCATCAAGTGTTGGGCCTTTAT GGAGATGGATGAGCTCAAGTCAGGTCCGGCCTCCATCGAACTCTACAAGA AGCCGACAGATTTCAAGAGGAAGAAAGTGAACCTCCTTACGGTCAAGCCT CTCTTTCTGGAGCTCTACCTTACTCTGACCAAGGACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00270.0-exon-Sc0000086-1570713199:598473..598834 | Blg00270.0-exon-Sc0000086-1570713199:598473..598834 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:599922..599988 | Blg00270.0-exon-Sc0000086-1570713199:599922..599988 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:600983..601100 | Blg00270.0-exon-Sc0000086-1570713199:600983..601100 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:601668..601737 | Blg00270.0-exon-Sc0000086-1570713199:601668..601737 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:602068..602180 | Blg00270.0-exon-Sc0000086-1570713199:602068..602180 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:602542..602667 | Blg00270.0-exon-Sc0000086-1570713199:602542..602667 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:603289..603411 | Blg00270.0-exon-Sc0000086-1570713199:603289..603411 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:603933..604050 | Blg00270.0-exon-Sc0000086-1570713199:603933..604050 | Branchiostoma lanceolatum | exon |
Blg00270.0-exon-Sc0000086-1570713199:604650..606005 | Blg00270.0-exon-Sc0000086-1570713199:604650..606005 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:598473..606005 + |
Properties
Property Name | Value |
GeneID | Blg00270 |
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