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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:563860..568314- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00352.1 ID=Blg00352.1|Name=Blg00352.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4455bp|location=Sequence derived from alignment at Sc0000086:563860..568314- (Branchiostoma lanceolatum) GGACTAGTCCAGATGTAATACACCGAAACTAGTTCTGGGGAAGTCCGTTA
CGCATCATGCGTAGCGTTTTGCCACCATTCATGAACGCAGGGCGAAAATA
AGCTATCGCTCCTGCTGTAGTTCGATCTTTCACCATAGAGAGCAGCTGGG
AGTGACATGAGACATGGCGGAAAGGATCCCGCACAAGCCCGGAGGGGACC
AGCTGGACAGGGCGTTATTGGAGGCCTTCGTGCCGCTACTGAGGGAGACC
GTCATACCCAGCACCATCATCGCACACCTCATGGCACTCCTACCACAAGG
TGATGTCATCGACTGTACACAACTGTCTGAAATTTAATACTGCCGTCTTT
TATAAATCTTAAAGCAAAACCTATTTTCGGGTACAAAACGAAAGCATAAT
GAAAAAAAGCGGAAGGTCCCTGCGCTTGTTTCCTCTTTATGACACCCCTG
CTTTAGCTGTGCGACACCCCTGCTAATTCCCGAGTGGCCAGCTTTTTCAG
AAGCTTTTTCTTTTGTTCCACCATACTACTTTTGACAAGGTATCTAGTTG
TTGCTACTTGTGTACAATCTGTGAACTAGAGACTGACATACAAATCAACA
TTTGAACCAGGAAGTTGGCAGCTACTTTCATGGTAAAACAGGAAATGATA
CCGTGTTTTCATAGCTAAGAAGTGTGTTTCATTTTCTATTCATGTTTATA
TTTCTGATAAAACTAGATTTGAAACACGAATTTTTAAAGATCATTTTGTT
GAGTTACATAGGGAATACAAAGCACATCGCACGCTACCCCATCGTCTTGG
TATCAAGACCAAAAATACATTTGTGTGATTGTTTTACTTATGGTCATTGT
TTTGGATAATGACGCCATTTCGTCTGTCATAGACGTCACATAAATGATTG
CTCCAGAGCAGAGTTTGTTGGCACTGTGGCAATGTATTTGTCGCGAATTT
GCAGATGAAGTCAACAAAATCCTCGCGGATGAGAGAAGTGGCGGACCTGC
GGTGGCCATGCAGCGGCTGTTGGCGGTACTGCAGGAGTGTAGACAGCCCG
GCTGGTTTCAGGCTCTTCTGGACGCCCTTGAAAATTCACGTGGGAATGAG
AATTTCAACGTATCTTTGTATTATCGCACTATTGCAAGAATTTTTAAAGC
ATAATGGGGAATTCATGAAAAATACGCATACTTACACATACACACGCACA
CACACGCGCACACACACACATAAGCTGAACACACACAAACACATGCATGC
ACATGTATTAGACAATTTCCTCACAAAGTCCTACTTTGTATAATTTGTAT
TTAATTGTACACGTATTATCTTTATAGAAACCAATACCTCCGCTGGCAAA
GGTAGATGCTTCATGCCACGCAACGCACCGCTACTTAACACAAATGTTTT
TTCATCGTTTATTTGTACCCCAGATTTCACTTGTGTACGAAATGCTAGTC
TCCAACCAGACCCAATAGATTGCAAAGACCGTATCCAACTGGAAGAAGGA
GCTTGTAATGCAATCTAAGGGTTGCGAAACGTACTTCCTCTGCCAGTTTG
ATACGGTCTTTATGCAACCTGGAGATTACGAAATGCACTGATACAGGGTA
TGAGCACATCCGGGACATCATCAAGGGACGACAGACTGGCTGCGACATGA
CGTTTTTCAGGCGCCTCCTAGCGGTTTGCGCGCCTAACCTGCAGCGGATC
GTGGCGGTGGACATGCTGCCGCATCTCTGTTGTCTTACTGACGACGATAA
AGTGGGTCTTCATACACAAACTAGCACTACATCTAGAGTTTCGAGATCAT
AAGGAGTAGAGACTTTGTAATGATAAACGCCAATCTGTAGAGGGTGAACC
TGTTTTAATCGTCGATTCTTAGAATTAGGATGTAACGTTACCCTTTTCCA
ACAGAATGTTCAACACAGTTTTTAAAACTTTGCTTCAAATTCTTTTGTGT
CACAAAGTACTTTTGAACTATGTACTATGTTACCTACCAACACAGGTGAA
CTTACATCCTAAGATATTGTCAAGTAATCTCCCTGATTTCTCACGTAACC
TGTAAACATGTGTAAACAGTGCGTACTCTACTGAAAATCATTTTGTTCCA
TGCTAGCGTTTTATTTGGATATATATACATTTCATTCACCCCGGCCTCCT
CCTGCAGGTTCTGGTTCAAAACGAGGCTCGTAACCATGGTAACTCCCGCG
CTGTGGTGACCCTGCTGGACCGCCTGTCCCGCCGTGAACCCGGCTGGTTC
CAACAGTTTCTCTCCGGACTCAGGCAGACCGGCTTTGGCGACATCGCAGA
ACAACTAGACGATCTGAGTTCAGGTAAGTCTGAATTTCTTCTCATGAGTT
TGACTTTTGCCCAGAAATATTTTAGTCATTCGAGGTACGCATAGCACACT
GCACACGTACAATGAGGCTGTTACAATACAACACATTTTTATTGGAAATA
TTGAATTATACAAAACACACAGACACACTCTGTCAATGACATTCTCTTGC
TCTCGCTCTCACGCACTCCAAAAATGTTTTACTGTTTTCGTCACATTGAT
ACTCTGGACTGGAGTTTAATATGTCTGTACATTGGATAAAGTAATGCAAA
GCGCTTTATATATACAGCATCCTTTAAAGGTAAGTTAAATGGATAATAAA
CTGTACTGTATTTAAGTGTTACGTTCTTCTCCCAGTTCCAGAAGCAGTTT
CATCTGTAGAAACATCGAGATCGTTTGCAGAAGTTAGCGGGACCGTTACG
GGCGGAGCGGAACTAACGGATGCCGAAGGCGGCTACCAGTCGTCACCCGT
TCGCCCTGTTTCCTTGGATTTACGACGGGAGACTGAGGAAAACACCACCC
ACCGACGACAAGGTGTTCAAATCTATAGCTAAGATTCACCAGTCGATACC
GTTAGATTCGACTTGAGATGAAATTGAAAGCAGACTTTTTCCTTTAAAGT
TCCTTTATTCAGATACATCAACGTACAGAAAACGACATACATGGATATTA
ACAAGGAACATGACAAACAAATGTACATATGCTGCCAAAATTAGTACAGC
AGTTTGCACATACAAAGCAGAAGTTATTGTCTTGCTGATAAGATAGACAT
ATCATAACAATGGCGTAATTTTGAAGATGTCTTTGATTATACTGTCCAAT
ATATGGCACTTTAAAGACATTTATCACTGGTTATGAGATCTAGAAAAGAA
GTACAAAAGAAAATTCTGGTTTAAAGCTTAAAATATTGACGTTATAAGGA
CTCTGTTTAATGTATCTTCATTTGGCAACAGTACCCGTACACGAGCCAGA
ACCGAGTTCCCCTAGTTCCCCGGAGGACGCTGCTCCATGGAAAGCGGCGC
TGAGTGACCTGGCGTCACAGCTCTTCGGCCAGGTGGGACTGGGAGGCACT
GTCGGGCAGGTGATGGCATCGAATAGCACACAATATCTAGTTCATGAGTT
AAAACAACATATTTCTGATGTTATGGTTGAACATGTCATATGTGTTGTAA
AAATGTTCTTCTTATATTTAGAGTATGAATCGAGTGCCGTGATTCTAAAT
CTTGCCGCACATTACATTTATTACCAAAACACACAAACTATGACCATTAA
AGACTCAATTTTATTCTTCTTTTGTGACCATTTAGACGTGAAAATTCCTA
TTTGCATTCATGCTTTACAAATGAAATCAGCAACTGCAAGCACCATACAA
ATCCTTGCCATCCTTGGCGAGTAGTACAGCCTCCTGGCTCCCGGGAGTCG
AACCTGCGCCGAACCCGGGCCGCCAGTCCATAAACCAAACGCACTTACCT
CTAGGCTAAAAGGTTCGGACCAGATAGCCTGGTCAGTTTACGTTGGTGGC
GTTTGAACTCCACTGTTACATTACTGTTGTCCAACATAGCTCTGTTGTGA
GTTCTGTACTAATCATGCACGTTAGATATCACTTCCACTGTACATGTACT
AACTTATATGAAGGTTACATCGACATCATCTTCTTCCAATAATGCAGGTT
TGTGTGTTTGGCCGTACCATTCACTACAGTACAAGAGGGGCGTTCAGCCG
TGGCTTGAAATGGAAGTTCTATGGCGAAGCACGGGATCAAGACAGCGGCC
GTTCGTTTCAAGATCCGGAAGGATGGAAGAACCAATCCACAGCAATAAGG
AGGGCAGCGGGAGGCGTCTTGAAGATTCTGATGGCTGAAGGAATAATAGA
ATACAGAGAGATTAACGAGGAAGACTTAGACTGACAAGCTTTTTTGATTC
ATCACTGTTGAACGTTTAGAAAGGGCTATCGAAAAGGTTCGATGAGAAAA
TCTTGAAAATTCAATACATCGTTGATATTTGTGTACATGTACTCCACTTT
TTTCTGTAGTAGATTTAGATAACGCAAAATGGCTAAGCTTAAGATGTAAA
CCTATAACGTGACCGGCCCCGAGTTCGCCCCTTTTTTGTAATAAATAATA
GTTTT Coding sequence (CDS) from alignment at Sc0000086:563860..568314- >Blg00352.1 ID=Blg00352.1|Name=Blg00352.1|organism=Branchiostoma lanceolatum|type=CDS|length=1134bp|location=Sequence derived from alignment at Sc0000086:563860..568314- (Branchiostoma lanceolatum) ATGGCGGAAAGGATCCCGCACAAGCCCGGAGGGGACCAGCTGGACAGGGC GTTATTGGAGGCCTTCGTGCCGCTACTGAGGGAGACCGTCATACCCAGCA CCATCATCGCACACCTCATGGCACTCCTACCACAAGATGAAGTCAACAAA ATCCTCGCGGATGAGAGAAGTGGCGGACCTGCGGTGGCCATGCAGCGGCT GTTGGCGGTACTGCAGGAGTGTAGACAGCCCGGCTGGTTTCAGGCTCTTC TGGACGCCCTTGAAAATTCACGGTATGAGCACATCCGGGACATCATCAAG GGACGACAGACTGGCTGCGACATGACGTTTTTCAGGCGCCTCCTAGCGGT TTGCGCGCCTAACCTGCAGCGGATCGTGGCGGTGGACATGCTGCCGCATC TCTGTTGTCTTACTGACGACGATAAAGTTCTGGTTCAAAACGAGGCTCGT AACCATGGTAACTCCCGCGCTGTGGTGACCCTGCTGGACCGCCTGTCCCG CCGTGAACCCGGCTGGTTCCAACAGTTTCTCTCCGGACTCAGGCAGACCG GCTTTGGCGACATCGCAGAACAACTAGACGATCTGAGTTCAGTTCCAGAA GCAGTTTCATCTGTAGAAACATCGAGATCGTTTGCAGAAGTTAGCGGGAC CGTTACGGGCGGAGCGGAACTAACGGATGCCGAAGGCGGCTACCAGTCGT CACCCGTTCGCCCTGTTTCCTTGGATTTACGACGGGAGACTGAGGAAAAC ACCACCCACCGACGACAAGTACCCGTACACGAGCCAGAACCGAGTTCCCC TAGTTCCCCGGAGGACGCTGCTCCATGGAAAGCGGCGCTGAGTGACCTGG CGTCACAGCTCTTCGGCCAGGTGGGACTGGGAGGCACTGTCGGGCAGGTT TGTGTGTTTGGCCGTACCATTCACTACAGTACAAGAGGGGCGTTCAGCCG TGGCTTGAAATGGAAGTTCTATGGCGAAGCACGGGATCAAGACAGCGGCC GTTCGTTTCAAGATCCGGAAGGATGGAAGAACCAATCCACAGCAATAAGG AGGGCAGCGGGAGGCGTCTTGAAGATTCTGATGGCTGAAGGAATAATAGA ATACAGAGAGATTAACGAGGAAGACTTAGACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00352.1-exon-Sc0000086-1570713199:568016..568314 | Blg00352.1-exon-Sc0000086-1570713199:568016..568314 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:567226..567360 | Blg00352.1-exon-Sc0000086-1570713199:567226..567360 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:566564..566718 | Blg00352.1-exon-Sc0000086-1570713199:566564..566718 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:565992..566157 | Blg00352.1-exon-Sc0000086-1570713199:565992..566157 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:565453..565629 | Blg00352.1-exon-Sc0000086-1570713199:565453..565629 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:564906..565033 | Blg00352.1-exon-Sc0000086-1570713199:564906..565033 | Branchiostoma lanceolatum | exon |
Blg00352.1-exon-Sc0000086-1570713199:563860..564317 | Blg00352.1-exon-Sc0000086-1570713199:563860..564317 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:563860..568314 - |
Properties
Property Name | Value |
GeneID | Blg00352 |
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