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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:548813..555855- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00309.2 ID=Blg00309.2|Name=Blg00309.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7043bp|location=Sequence derived from alignment at Sc0000086:548813..555855- (Branchiostoma lanceolatum) AAACCATTGAATAACAGGGTTGTCTGAGAATGAAAAAAATATTTACAAAA
GGGAGGGGGACATTCCAAAGGGAGATTGGCTTTTAGTAAAAGGTTTCGGG
GTGGGGAGATTTTTAGGGGGAGTACTAATAGCTACATTTTGACCCGAAGA
GAACTTTAAGCTATATTTTCATATACAAATATACCACCGATAAGCTTCCC
CTTTCGCATTTTTAACCTCTCCATATCGACCTGTGTCTATATATACTAAT
CTCATTTCATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTG
ACGTTTGTTCCCAATGTAATAGGTAAGTCTGAGGACTGGCATTTAAGATA
ACTCTCCAAGCAGAGGAGTGGGTCCGGCAGGTTTTTGACGTGTTTTTAGG
CGTTTTTGTCGAGCTTTCTACTTTGTCATGTTTTTTTTTTGTCTAGCCAA
GGACATTATATAATGTCCTTGGTCTAGCCAACCCACAAAAAAAACATGAC
AAAGAAGAAAGCCCGACATTAACCCCGAATTAAGGTGTATGTACCCCGAC
TTGTAGCATATGTACCCCGACTTGTAGCGTATGTACCCCGACTTGTAGCG
TATGTACCCCTACTTGTAGGGTATGTACCCCTACTTGTAGCGTATGTACC
CCGACCTGTAGCGTATGTACCCCGACCTGTAGCATATGTACCCCGACCTG
TAGCGTATGTACCCCGACTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAGCGTATGTACCCCGACTTGTTGCGTATGTATC
CCGACCTTAAGGTCTCATTCTTGTATTACTCCGAGTGGGTACCCTAGAAG
AGTCCGTTGCCCAAAATAAGAACGGCTGCATATACGTGTGTCTATATCGG
TTTAAATCCCTTTTAGCTGGCCCAGCTGATATCAAGCGTCAAACTGATGA
AAGCTTGTTTGTAACGAAAGAAACTAACAGGTAAAGTTCGGCAGCCGCGC
GCGAGGTCGGACGTCCACAGCCGGACATTGGCGGTAATTCGGTCGATCAC
TTTCAGCTGCAAAGTACCTATTTAGGGGGTCTAGCAAAGTGCCGTTTGTA
ATTGCCATAAAAAGGTATTGTATGCCAACTGGTAGTTGGCAATTTTTTAA
AATGATCTAGGGTAGATGAGCTCAACAGAGAATGAATGACATTGGTGCAT
TTCTTATAGCTTCATTGCGAACGCGCTCATGTAAAACACGTTTTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGTATGTACCCCGAC
TTGTAGCGTATGTACCCCGACTTGTAGCGTATGTACCCCGACCTGAAGCG
TATGTGACCCAACTTGTAGCGTATGTACCCCGACTTGTAGCGTTTAAATG
GTCCTTTCCAAAGATACTCTCCAAGCAGAGGAANGTCCGTTTTCAGATAT
AAACCATCATTGCATCTTAGTGCATCATTTAACATTTAAAGATGTTTATC
AACACAGTACAGCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGACT
ATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTACCACATGCTTGATGAC
CCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAAGT
AAACNTGAATTATATCAGTTGATCATCTTCTCTATCCAAATAACAAGTTC
AAAGTATGAAAGTCTTATCTTAGAAAAGAAGGCTATTGTAGCATTTCCTC
ATAAACTATGTGAATGAGGCTCTCAATTATGCAAAATATGTATTCATTTG
CATATTGCTTTCTATCGATATTCCTCTCTTTCTCAGTTACCTATGTTACG
TGTTTGAGAGTCCTATAATGGAGTGCAACAGATTTATAAACTTTCCTTAT
TAATTATGCAAATTACCTACTTATTTGTATAATTAGCATGCGATTTTGTC
AATCATCACTACCAACGATCTACCTACCAAATATTATGACGATCCGTCAA
CGCTTTCTTGAGATATTCACTTTCCAAATCGGCTCCTGCAGTTCCAACTG
CTATGGGGCCCAAACCTTCACAACATACTTCTCCCAGGTCCTATCTACCA
CTCAAAATCATGACCATAGCATGTCCACAACACGAGATATCAAACCCGGA
AGTTCCGCTGCAGTACCATAGTAAGCCATTAGGGGCCCAAAATCGAATCT
ACTCATTTTGAGGTCTCAAAAAGACCTACCCACATACCAAGTATCAAGAC
AATCCATCCAGGTACTCTCGAGTTATACTGTCTACACACACACGCACACA
CACGCACGCACACACACACACACACACACACACACACACACACACACGAA
CACTGTACAAAACATACCCTTCTCGGCAAAGGTAATAATAAAACAGTGTT
ACTCACATGTTACCATGTGATCGTCCGTTTTCAGATATAAACCATCATTG
CATCTTAGTGCATCATTTAACATTTAAAGATGTTTATCAACACAGTACAG
CGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGACTATGTTCGCATCG
TCTTGCTCCTCGTTGCCTACTACCACATGCTTGATGACCCTGTTATCGGC
TCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAAGTAAACGGCTATGC
CGCCCGCTTGTTCAACCAATGTAAGACAATGAGATCAATATATGAACTAT
TGCATTAGTTTACAGACTCTGAGATATTGCAGGAAAGGCTAGAAATAACA
CTTAATTCCTTCATAAACATCTTTTGTCGTACAAAGGAGCTAACAATATT
ATGGTAGATCCACATATCATCATGTTGGTTCAAAGACTCTGATAATTATC
GCAAGCCATTGACAGTGTATAATGAGATCAAATCAAAAATAGTGCACGAC
TTTCTTGTATAGTAGTATAGATAAACCAGGGAGTTAGACCATAGTCATAG
AGCATGAGGTTTACTGTTAATGTTAGCAATAGAAGATAACAGTACGTTTG
GCCGCACCGATCAATTTCCTCATTTTCGGACATTATAAAAAAATATTTAA
TGTGGGCTGGGAGGAAAACTAACACATGACTATATTCAGTCCCTAGAGTT
GTGTACACCAAAGGCGCAGACAGTATTATTCCATCAGACATTGTTATCGG
GTTAATTTTCCCGTTCAGCAATTATCTTTTTGACTCCGAGAAGAAATTGA
ACTTGCATGGCCTTACCTGGCCCATCTGAATTTCTTTGTTCCTTTACCGC
AACGTTTGACTTCTTTTCCTCACTCTCCTTCTTTTTTATTTGCGAGAAAT
GCCTCAGACCACACTACCCTTACAATAAAATGCAATAATCATGTACATTA
TCACTAATACATTGTTGTACCTGTACGTCTGTAGGCACTCGTTTCGGGAG
TCAGTTGGACATACTGGTAGATCTAGTGGGTACCTGTGGGCTGCTGACGG
TGCTGTGTATGCTGTACCCGAGATGGGCCATGGTCTTCCAGGTCAGCACA
GCACTGGACATCTCAAGCCACTGGATGCACTTTTACAGGTGCTTGTTAGA
GGGTTTATTAAGTCTATCTTTATTATACATGAATATATATATACATATAT
ATATATATATATACAGTATATATATATATGTATATAACAGAGAGAAAGAG
AGATAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAAAGAGAGAGAGAGAGAGAGATGAGGTATCATGAAGAGGG
TTTTAAATTTCATTTCTTTATTGGATTGGAGAGTTTGATCCCACAACCAT
TGCAAACAAATAGAGCAACATTACAGCTTAACACTCCAGCTATTTCACCG
GCACCCAAAGCTACATATGAAGGATTTTGGGCGATTTAGAATTCCTTAAT
ATGTCACAGCTGTAACCCCGATTCACTAGAAAATACGGACCGTCCCAATA
CACGATAATGGCTGTAAAGACTATTACTTTGAAATGAAGATTCGGGGTTT
ACCTGTTACAACTTTTCTTTCCCCGAAGCACAATCTCACTGATGAAGTCT
GCGACCCACAAGATGGCAAATTTCGCCAGCCCACTCCTGAACCTGTACTA
CTCCAACTCGGTCAGTATTCAGAGTGTTAACATTTCATACTTCATGCTGA
AATACATTGTGTAGATCAGAAGCTATCACTACTAGCTGTGACAACGACCT
TATCTGCATGTTGACGATGACCTTTGTTGCATTTTCATTCCCAGAAGGGC
TAAATGCCGTGCGTTTAATAAATAAAAGGGAAAAAGACAAGCATGTACTA
TTTTACAATTTGTACCACTAAGTAACAATCAGATAATATTTTGTGGTTAA
TTTGGGGGTATATAAAGGGTTTGGGGTATCATTTGAAAACTTGCACAGGC
TGTAGAGACATGTCACATTTCTTCACATTCCAGCACTTTATGCGTGTCAT
GTGCATTGGCAATCAGGCCTGTTACATCATGTTGTACCTGCGGTACTTCA
CACCAGGACCATTTTGTGAGTCATCCGCCATTCAATGTGATTTGTATAAT
ATAAATGAGACAAAACTGTATGAAGTTGTGTTGACATTATTAAATGATGT
GGCNTTTATTAGATGATGTGGCGGGAAGGTTATATATAGTAGTTTTAAAC
TCTGAAGATAAAAGCATTCCAGAGAAGGCATATGAAACTTCACATTGACT
AAAATTACTTTTCTGGTAAAAATATTTTAACACAGGTTTGACCAATCCTC
TGCTCTTCTTCCAGATAACTGAGGACCCAGTTGCTCGGCACACGTCACCT
CCCGAAAGTGTAACGTAAGCATGAGGTCAAAGGTGGTTGAACGGGGGCCG
GTACAGACTTTCAACCACCTTTGACCCGGTGCTGACGTCACATTTCTAGA
AAGTGGTGTCTACTTAGCAACCGGGTCCTCCGTTATCCTGAGGGTTGGAG
TGAAATGCTATTCCATGACGTTACGTACCAACACAATTGACCTTTTATGT
TAGATCTCTTTCAAAGTTTTATTTCACTTTTGTCCATGTGAAGGGCCATT
CACGAGAGTCGGTCTGTATGCAGTACTCTTCTACCTGTGTCTCCCTGTGG
CACTGCTGAAGGCCTACATCAACTGTGTGCAGCTGCAGGAAGCAGTAAGG
ACAATCACTGAAGTGGACATGCAAGAGAGAAAACAAGCGCTGGCATATTA
AAGACAAAGACATTACCAGAACAAACCGGAAAATCCTTCCCAAATGGATT
TCACTTGGAGAGGGTTTTTTCCAGGTTATTGGTGGATTGAAGACGAAACG
TGGAAGCTCTGCATGTCATAAGACAGCGGGCCAATCGCGAGTCTCAAAAT
ACCAGAAAGAGTTTCTACTTTCTGCCGTATCTTTCACGTGATGACTGGTG
TGCGCTTAGGTAGTGGACCGCTTCATCTGCGAGGCAAACTAGTGGGCGGA
TAGCTTTGTTTTTTTTTTTACATAAAATAATGTACATCCGCGCATACAAA
GGCTGCTTCAGACAGATTTGGTTGAAAGCTTATAAACAATACATCCTTTC
CCAACATTCTATAATTTCATGTATAGTGTGGATATAACGGTTACGTCCTG
TTTACATTTTTGTCCAGCATACTACAAGGCAAAGATGTTGCAAACATGTA
TTTTCTTGACATTATCATATCTGGACTTGCAAATGTAACACTATATAGGG
TCAGTATATCATAGTTTTCTTTAAATTATAAATGTACGTGCGTTATAATG
TGCAACTTGCTTTTCCGGCCTGGAACATTAATACGGAAGGAAGGGGCAAA
AATATGGATAATAACCCTCTGATCCCGCGGCCTCAAAAAGGCCATGGGAC
TACCTGTACGAGTGTCTTTATGACGTGGAAATAGGATATGAAGTAGATTA
ATCATGCTGTCGCGAAAGTAGCAACTTAACTCTTGATGCACATAGAGACA
CGCCAGTTGTGAAGTACCTGCTGTATGTAGAATATCTAGAGACGACTACA
AATGCTGCATTCACGTGGGAATAAAAAGTGAGGTCAAAATACT Coding sequence (CDS) from alignment at Sc0000086:548813..555855- >Blg00309.2 ID=Blg00309.2|Name=Blg00309.2|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000086:548813..555855- (Branchiostoma lanceolatum) ATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTGACGTTTGT TCCCAATGTAATAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACT ACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAAC GTCATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATG CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA CAGCACAATCTCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTCG CCAGCCCACTCCTGAACCTGTACTACTCCAACTCGCACTTTATGCGTGTC ATGTGCATTGGCAATCAGGCCTGTTACATCATGTTGTACCTGCGGTACTT CACACCAGGACCATTTTGGCCATTCACGAGAGTCGGTCTGTATGCAGTAC TCTTCTACCTGTGTCTCCCTGTGGCACTGCTGAAGGCCTACATCAACTGT GTGCAGCTGCAGGAAGCAGTAAGGACAATCACTGAAGTGGACATGCAAGA GAGAAAACAAGCGCTGGCATATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00309.2-exon-Sc0000086-1570713199:555534..555855 | Blg00309.2-exon-Sc0000086-1570713199:555534..555855 | Branchiostoma lanceolatum | exon |
Blg00309.2-exon-Sc0000086-1570713199:552186..552320 | Blg00309.2-exon-Sc0000086-1570713199:552186..552320 | Branchiostoma lanceolatum | exon |
Blg00309.2-exon-Sc0000086-1570713199:551318..551471 | Blg00309.2-exon-Sc0000086-1570713199:551318..551471 | Branchiostoma lanceolatum | exon |
Blg00309.2-exon-Sc0000086-1570713199:550746..550827 | Blg00309.2-exon-Sc0000086-1570713199:550746..550827 | Branchiostoma lanceolatum | exon |
Blg00309.2-exon-Sc0000086-1570713199:550341..550422 | Blg00309.2-exon-Sc0000086-1570713199:550341..550422 | Branchiostoma lanceolatum | exon |
Blg00309.2-exon-Sc0000086-1570713199:548813..549812 | Blg00309.2-exon-Sc0000086-1570713199:548813..549812 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:548813..555855 - |
Properties
Property Name | Value |
GeneID | Blg00309 |
|