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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:548813..555706- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00309.6 ID=Blg00309.6|Name=Blg00309.6|organism=Branchiostoma lanceolatum|type=mRNA|length=6894bp|location=Sequence derived from alignment at Sc0000086:548813..555706- (Branchiostoma lanceolatum) AGAACTTTAAGCTATATTTTCATATACAAATATACCACCGATAAGCTTCC
CCTTTCGCATTTTTAACCTCTCCATATCGACCTGTGTCTATATATACTAA
TCTCATTTCATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTT
GACGTTTGTTCCCAATGTAATAGGTAAGTCTGAGGACTGGCATTTAAGAT
AACTCTCCAAGCAGAGGAGTGGGTCCGGCAGGTTTTTGACGTGTTTTTAG
GCGTTTTTGTCGAGCTTTCTACTTTGTCATGTTTTTTTTTTGTCTAGCCA
AGGACATTATATAATGTCCTTGGTCTAGCCAACCCACAAAAAAAACATGA
CAAAGAAGAAAGCCCGACATTAACCCCGAATTAAGGTGTATGTACCCCGA
CTTGTAGCATATGTACCCCGACTTGTAGCGTATGTACCCCGACTTGTAGC
GTATGTACCCCTACTTGTAGGGTATGTACCCCTACTTGTAGCGTATGTAC
CCCGACCTGTAGCGTATGTACCCCGACCTGTAGCATATGTACCCCGACCT
GTAGCGTATGTACCCCGACTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAGCGTATGTACCCCGACTTGTTGCGTATGTAT
CCCGACCTTAAGGTCTCATTCTTGTATTACTCCGAGTGGGTACCCTAGAA
GAGTCCGTTGCCCAAAATAAGAACGGCTGCATATACGTGTGTCTATATCG
GTTTAAATCCCTTTTAGCTGGCCCAGCTGATATCAAGCGTCAAACTGATG
AAAGCTTGTTTGTAACGAAAGAAACTAACAGGTAAAGTTCGGCAGCCGCG
CGCGAGGTCGGACGTCCACAGCCGGACATTGGCGGTAATTCGGTCGATCA
CTTTCAGCTGCAAAGTACCTATTTAGGGGGTCTAGCAAAGTGCCGTTTGT
AATTGCCATAAAAAGGTATTGTATGCCAACTGGTAGTTGGCAATTTTTTA
AAATGATCTAGGGTAGATGAGCTCAACAGAGAATGAATGACATTGGTGCA
TTTCTTATAGCTTCATTGCGAACGCGCTCATGTAAAACACGTTTTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGTATGTACCCCGA
CTTGTAGCGTATGTACCCCGACTTGTAGCGTATGTACCCCGACCTGAAGC
GTATGTGACCCAACTTGTAGCGTATGTACCCCGACTTGTAGCGTTTAAAT
GGTCCTTTCCAAAGATACTCTCCAAGCAGAGGAANGTCCGTTTTCAGATA
TAAACCATCATTGCATCTTAGTGCATCATTTAACATTTAAAGATGTTTAT
CAACACAGTACAGCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGAC
TATGTTCGCATCGTCTTGCTCCTCGTTGCCTACTACCACATGCTTGATGA
CCCTGTTATCGGCTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAAG
TAAACNTGAATTATATCAGTTGATCATCTTCTCTATCCAAATAACAAGTT
CAAAGTATGAAAGTCTTATCTTAGAAAAGAAGGCTATTGTAGCATTTCCT
CATAAACTATGTGAATGAGGCTCTCAATTATGCAAAATATGTATTCATTT
GCATATTGCTTTCTATCGATATTCCTCTCTTTCTCAGTTACCTATGTTAC
GTGTTTGAGAGTCCTATAATGGAGTGCAACAGATTTATAAACTTTCCTTA
TTAATTATGCAAATTACCTACTTATTTGTATAATTAGCATGCGATTTTGT
CAATCATCACTACCAACGATCTACCTACCAAATATTATGACGATCCGTCA
ACGCTTTCTTGAGATATTCACTTTCCAAATCGGCTCCTGCAGTTCCAACT
GCTATGGGGCCCAAACCTTCACAACATACTTCTCCCAGGTCCTATCTACC
ACTCAAAATCATGACCATAGCATGTCCACAACACGAGATATCAAACCCGG
AAGTTCCGCTGCAGTACCATAGTAAGCCATTAGGGGCCCAAAATCGAATC
TACTCATTTTGAGGTCTCAAAAAGACCTACCCACATACCAAGTATCAAGA
CAATCCATCCAGGTACTCTCGAGTTATACTGTCTACACACACACGCACAC
ACACGCACGCACACACACACACACACACACACACACACACACACACACGA
ACACTGTACAAAACATACCCTTCTCGGCAAAGGTAATAATAAAACAGTGT
TACTCACATGTTACCATGTGATCGTCCGTTTTCAGATATAAACCATCATT
GCATCTTAGTGCATCATTTAACATTTAAAGATGTTTATCAACACAGTACA
GCGTGATTAATGTCCTTATGTTTTCTTCTTCAACAGACTATGTTCGCATC
GTCTTGCTCCTCGTTGCCTACTACCACATGCTTGATGACCCTGTTATCGG
CTCCGTGTGCTACTTCAGTAACGTCATCCTAGATGAAGTAAACGGCTATG
CCGCCCGCTTGTTCAACCAATGTAAGACAATGAGATCAATATATGAACTA
TTGCATTAGTTTACAGACTCTGAGATATTGCAGGAAAGGCTAGAAATAAC
ACTTAATTCCTTCATAAACATCTTTTGTCGTACAAAGGAGCTAACAATAT
TATGGTAGATCCACATATCATCATGTTGGTTCAAAGACTCTGATAATTAT
CGCAAGCCATTGACAGTGTATAATGAGATCAAATCAAAAATAGTGCACGA
CTTTCTTGTATAGTAGTATAGATAAACCAGGGAGTTAGACCATAGTCATA
GAGCATGAGGTTTACTGTTAATGTTAGCAATAGAAGATAACAGTACGTTT
GGCCGCACCGATCAATTTCCTCATTTTCGGACATTATAAAAAAATATTTA
ATGTGGGCTGGGAGGAAAACTAACACATGACTATATTCAGTCCCTAGAGT
TGTGTACACCAAAGGCGCAGACAGTATTATTCCATCAGACATTGTTATCG
GGTTAATTTTCCCGTTCAGCAATTATCTTTTTGACTCCGAGAAGAAATTG
AACTTGCATGGCCTTACCTGGCCCATCTGAATTTCTTTGTTCCTTTACCG
CAACGTTTGACTTCTTTTCCTCACTCTCCTTCTTTTTTATTTGCGAGAAA
TGCCTCAGACCACACTACCCTTACAATAAAATGCAATAATCATGTACATT
ATCACTAATACATTGTTGTACCTGTACGTCTGTAGGCACTCGTTTCGGGA
GTCAGTTGGACATACTGGTAGATCTAGTGGGTACCTGTGGGCTGCTGACG
GTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTCTTCCAGGTCAGCAC
AGCACTGGACATCTCAAGCCACTGGATGCACTTTTACAGGTGCTTGTTAG
AGGGTTTATTAAGTCTATCTTTATTATACATGAATATATATATACATATA
TATATATATATATACAGTATATATATATATGTATATAACAGAGAGAAAGA
GAGATAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGATGAGGTATCATGAAGAGG
GTTTTAAATTTCATTTCTTTATTGGATTGGAGAGTTTGATCCCACAACCA
TTGCAAACAAATAGAGCAACATTACAGCTTAACACTCCAGCTATTTCACC
GGCACCCAAAGCTACATATGAAGGATTTTGGGCGATTTAGAATTCCTTAA
TATGTCACAGCTGTAACCCCGATTCACTAGAAAATACGGACCGTCCCAAT
ACACGATAATGGCTGTAAAGACTATTACTTTGAAATGAAGATTCGGGGTT
TACCTGTTACAACTTTTCTTTCCCCGAAGCACAATCTCACTGATGAAGTC
TGCGACCCACAAGATGGCAAATTTCGCCAGCCCACTCCTGAACCTGTACT
ACTCCAACTCGGTCAGTATTCAGAGTGTTAACATTTCATACTTCATGCTG
AAATACATTGTGTAGATCAGAAGCTATCACTACTAGCTGTGACAACGACC
TTATCTGCATGTTGACGATGACCTTTGTTGCATTTTCATTCCCAGAAGGG
CTAAATGCCGTGCGTTTAATAAATAAAAGGGAAAAAGACAAGCATGTACT
ATTTTACAATTTGTACCACTAAGTAACAATCAGATAATATTTTGTGGTTA
ATTTGGGGGTATATAAAGGGTTTGGGGTATCATTTGAAAACTTGCACAGG
CTGTAGAGACATGTCACATTTCTTCACATTCCAGCACTTTATGCGTGTCA
TGTGCATTGGCAATCAGGCCTGTTACATCATGTTGTACCTGCGGTACTTC
ACACCAGGACCATTTTGTGAGTCATCCGCCATTCAATGTGATTTGTATAA
TATAAATGAGACAAAACTGTATGAAGTTGTGTTGACATTATTAAATGATG
TGGCNTTTATTAGATGATGTGGCGGGAAGGTTATATATAGTAGTTTTAAA
CTCTGAAGATAAAAGCATTCCAGAGAAGGCATATGAAACTTCACATTGAC
TAAAATTACTTTTCTGGTAAAAATATTTTAACACAGGTTTGACCAATCCT
CTGCTCTTCTTCCAGATAACTGAGGACCCAGTTGCTCGGCACACGTCACC
TCCCGAAAGTGTAACGTAAGCATGAGGTCAAAGGTGGTTGAACGGGGGCC
GGTACAGACTTTCAACCACCTTTGACCCGGTGCTGACGTCACATTTCTAG
AAAGTGGTGTCTACTTAGCAACCGGGTCCTCCGTTATCCTGAGGGTTGGA
GTGAAATGCTATTCCATGACGTTACGTACCAACACAATTGACCTTTTATG
TTAGATCTCTTTCAAAGTTTTATTTCACTTTTGTCCATGTGAAGGGCCAT
TCACGAGAGTCGGTCTGTATGCAGTACTCTTCTACCTGTGTCTCCCTGTG
GCACTGCTGAAGGCCTACATCAACTGTGTGCAGCTGCAGGAAGCAGTAAG
GACAATCACTGAAGTGGACATGCAAGAGAGAAAACAAGCGCTGGCATATT
AAAGACAAAGACATTACCAGAACAAACCGGAAAATCCTTCCCAAATGGAT
TTCACTTGGAGAGGGTTTTTTCCAGGTTATTGGTGGATTGAAGACGAAAC
GTGGAAGCTCTGCATGTCATAAGACAGCGGGCCAATCGCGAGTCTCAAAA
TACCAGAAAGAGTTTCTACTTTCTGCCGTATCTTTCACGTGATGACTGGT
GTGCGCTTAGGTAGTGGACCGCTTCATCTGCGAGGCAAACTAGTGGGCGG
ATAGCTTTGTTTTTTTTTTTACATAAAATAATGTACATCCGCGCATACAA
AGGCTGCTTCAGACAGATTTGGTTGAAAGCTTATAAACAATACATCCTTT
CCCAACATTCTATAATTTCATGTATAGTGTGGATATAACGGTTACGTCCT
GTTTACATTTTTGTCCAGCATACTACAAGGCAAAGATGTTGCAAACATGT
ATTTTCTTGACATTATCATATCTGGACTTGCAAATGTAACACTATATAGG
GTCAGTATATCATAGTTTTCTTTAAATTATAAATGTACGTGCGTTATAAT
GTGCAACTTGCTTTTCCGGCCTGGAACATTAATACGGAAGGAAGGGGCAA
AAATATGGATAATAACCCTCTGATCCCGCGGCCTCAAAAAGGCCATGGGA
CTACCTGTACGAGTGTCTTTATGACGTGGAAATAGGATATGAAGTAGATT
AATCATGCTGTCGCGAAAGTAGCAACTTAACTCTTGATGCACATAGAGAC
ACGCCAGTTGTGAAGTACCTGCTGTATGTAGAATATCTAGAGACGACTAC
AAATGCTGCATTCACGTGGGAATAAAAAGTGAGGTCAAAATACT Coding sequence (CDS) from alignment at Sc0000086:548813..555706- >Blg00309.6 ID=Blg00309.6|Name=Blg00309.6|organism=Branchiostoma lanceolatum|type=CDS|length=528bp|location=Sequence derived from alignment at Sc0000086:548813..555706- (Branchiostoma lanceolatum) ATGGACAACCGAGACGACAACATGGGGCAGTACGAAGTGTTGACGTTTGT TCCCAATGTAATAGACTATGTTCGCATCGTCTTGCTCCTCGTTGCCTACT ACCACATGCTTGATGACCCTGTTATCGGCTCCGTGTGCTACTTCAGTAAC GTCATCCTAGATGAAGTAAACGGCTATGCCGCCCGCTTGTTCAACCAATG CACTCGTTTCGGGAGTCAGTTGGACATACTGGTAGATCTAGTGGGTACCT GTGGGCTGCTGACGGTGCTGTGTATGCTGTACCCGAGATGGGCCATGGTC TTCCAGGTCAGCACAGCACTGGACATCTCAAGCCACTGGATGCACTTTTA CAGCACAATCTCACTGATGAAGTCTGCGACCCACAAGATGGCAAATTTCG CCAGCCCACTCCTGAACCTGTACTACTCCAACTCGTTTTATTTCACTTTT GTCCATGTGAAGGGCCATTCACGAGAGTCGGTCTGTATGCAGTACTCTTC TACCTGTGTCTCCCTGTGGCACTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00309.6-exon-Sc0000086-1570713199:555534..555706 | Blg00309.6-exon-Sc0000086-1570713199:555534..555706 | Branchiostoma lanceolatum | exon |
Blg00309.6-exon-Sc0000086-1570713199:552186..552320 | Blg00309.6-exon-Sc0000086-1570713199:552186..552320 | Branchiostoma lanceolatum | exon |
Blg00309.6-exon-Sc0000086-1570713199:551318..551471 | Blg00309.6-exon-Sc0000086-1570713199:551318..551471 | Branchiostoma lanceolatum | exon |
Blg00309.6-exon-Sc0000086-1570713199:550746..550827 | Blg00309.6-exon-Sc0000086-1570713199:550746..550827 | Branchiostoma lanceolatum | exon |
Blg00309.6-exon-Sc0000086-1570713199:548813..549839 | Blg00309.6-exon-Sc0000086-1570713199:548813..549839 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:548813..555706 - |
Properties
Property Name | Value |
GeneID | Blg00309 |
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