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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:406580..413988- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00336.2 ID=Blg00336.2|Name=Blg00336.2|organism=Branchiostoma lanceolatum|type=mRNA|length=7409bp|location=Sequence derived from alignment at Sc0000086:406580..413988- (Branchiostoma lanceolatum) GAAATCTTTGCGGGATAACGTTAGATACTCTCCTAATGATGAAGATGCTT
GCTCTCGAATTAATCCTCATCCCAATTTTGCAACTACTTGTTTTCCTATT
TTTCTTACCTTCACTGTTTAGGAACTTAAATATCTATACTGTAATTCATG
TTTTCCTGTTCATTGCATGGAGGTGAAAGATGGGAATGGATCTTAGTCTC
TACCAGACTAACCGCGTCGGCTATAGAGAGAACATTTGCCGGGGGACTTT
GGCCATGGGGGATAACATTCCCATCCGCAGGGTTGCAATATTGGGCCCTA
TCTCCATAGCCGACCCCCTTCATACAATTGACTCTATTTGGCCAATTTCT
ACTATTTTCCCAGCGACCCGCAGATGGCAGAGGCTGGTAGAGTCCAGAAA
TGGATCTATAGTCGAACAGCAACGCCGACTAGGGACCAAAGTAGATACTG
CTTTTCGAAAAGACCTTTCGAAATTATGAGCCTAAGCTTGGCAAATTCGA
GGACACATTTGTGCCTCGCTGGCTTTCATGTTTTTGCATACAGTTCAAGG
TTTAGGGCGCACAATTTTTTACCGTTAAAGTCGTAGAATCCGGGGGTCGC
GGTGAAATGCTGTGTGCTGCTACCTTAACATCAATTGGTGTATCAGGTAC
AGTATCCTGACCTTTAACCTTTGCGCGTAGGAAATAAAAGTTGGCTCGCT
ATTTTTGTATAAGAAACGCATATTTATCGTCGTTATTACATCTGGTAGAA
CAATGGGTTGAATATGGAAGGAATCGTCACATCATTGGAGTTTCCGGAAG
TCCCAAATAGCGAGGATGATACCAGGGTAAGTGATGTGAACGGATTTGTG
TGTGGTGATGATATGCCCCCCTCCCCATCTTCAGCAAGTTCTAGTTCTTG
GACGTATTTGGAAATAATTAAACGATACTCCTTTGTTTTGGATAACCACA
GATTTTAACACTACGTAATTTACATTTTCAACATCTCCTTTGTCAGTTTT
TGGAGTCTTCAAGTGTCAAGTGTGAGATGATATTTTACAATGTTTAATAC
TATAATTTTGATATTCCTTGTTGTTGTTGTCCTTGTTTAACGTCTATTAC
ATGGCTAGACGTTGTCTCTTGGTGTACATGCACAATGTACAGTTGCACAT
GCACAAATGGACAGTATTAAGCAGGTTTTAATTTCAAACAAATTTTCCAT
TCTGGCAGAAAATGCCGAATAGTCAAAAGTAGAAAATACCTGTTGTTTCT
TCCACTGCTCAGGACTGGAGCTACACCATGAGAAGAAGCATGCAGGTGCG
TCCAAATATAGCCATTTATGCAAATATGAGATTATTTTAATTAGCTCTAG
CAAACCATTCATTATCTTTTTTTTTATACCAACGGTATTAGCCATGGTGG
TAAGTACTATTTCCGAAACTTAATACAAATTTGTATGAAAAAGTAGTAAA
TGCAACTTCTTTCATCGGCGCAGATAATGTTACAAGTTACAACGGCACCA
AACATATTGGACATTTACTGTAAACATATGTTGGTATCAGCAATTTCATA
CAGAAGCAGTGCACAGTGTGATTAGAAGTGATTAGAAGTTCCATACATGT
ATTTGTTCCATTCACTACTAGTATTACATGTACTTAGACATGGACTCAAA
ACATTTTTATCCATAGGAAATCCTTCCCAATGTGTTCCTGGGGCCATACT
CTGTAGCTACAAAGAGAAATGTAAGTCATATTTGTAGCTATGTATAGTGA
TATCCTTTCTATCAGAACAAGTGTACAAATACTGTTGATTGTTAAGACTT
GTCTGATACTGTGTGGCATTGTCATTGTTGTGATTGGATGATGTTGTTTC
TAATGTTAAAAGAAACTAAAGAATGTCATCATTGAACGTGAAGCAGTCAC
AAAGTCTAATCTCCAGTATTGAAAGTAGTGGTAGTAATTAGTACTTTTGT
ATACCTGATGATAGGTAATGTTACATGAATGATGAGTTGGTCTTTCTTTA
CCATTAAAACTACAATAAAAAAATCCATGTTTCCCCTTACAGCTTTCCAA
CCTGTTGGAGTTAGGCATCACCCATGTAGTGTGTGTTAGAGATACCCTGG
AGGCTAAGATTATCAAACCAAACTTTTCAGATCATTTCAGGTGAGTTTCG
TATTATTACTGCTTATATAGGGGATATTCCTTTGAACGGAACAGGACATT
TTTCAACCTCTCTTATAGAAGAGCTATAAATACATGCTATAGAAGAGCTA
TAAGTATATGAAAAAAACAACTTAAACAAGGATATTATTGGTTGATAAAG
GTTGTCATGGTAAATGCAGCTCAGTAAATGGGTTCAAGCAGCAAGGACTA
TCATTTTTGATAAATTGTGAATAAAGAAGAATAAAATTGAGTCTTAACTG
CTGAATTACTAAATTGTGAATAAAGTACAAAATGATTGATGATTGTAATG
AAGTTGATGGTGAAATCATAATTTTTTTCGTTTTGTCTTTTCTTCTTTCA
GATACTTGGTACTGGATGTTGCAGATAAAACCACAGAAAACATAATTCAA
CACTTTCCTAAGGTGACATGTGCTATCCACTTTTATCTAGATATGATGTT
GAGGTGTCCTTCCTCAGAAATGTGATAGGTGGCATGGTTGGACAAAAAGA
CTAAATGATTTTTTTTTCATATCAATGATAAAACCATAGAAAACATAATT
CAACACTTTCCTAAGGTGACATGTGCTATCCACTTTAATCTAGATATGAT
GTTGAGGTGTCCTTCCTCAGAAATATGATAGGTGGCATGGTTGGACAAAA
AGACTAAGAATTTTTTTTCATATCAATGTAACACAATACTTGTAGCTGAT
AGAGGCTCATTGCTATGAGAAGGAAAGGTAGAATTAGGGATAAACTGATG
TGTAAGGAAAGGAAAATTGAATAATGGAAAATGGAGGCATTGCATAGAAG
TGAATGTCATTGCACACTATGCACGAATGCTCAGGGCTAAAAATTGATTT
GGTGGAATAGGTACCCTTGTGTAACTAGCCTACAAAAGTTTATGTTATAA
CACAGTTTTTATTACTTTTCTGACACAAATATCAAGAATATGCTGTAATC
TGATGTACAATAGTAGCTGAATTTAGATCAAATTGCCATATCAGCATTTT
CATCTTTTCTTCCCAACAAAGGTTAAAGAATTCATGGACCAGTGTCTACA
AACTGGAGGTAGGGGACAATCTATGGAAGTATTCAATTGTACACTTTCAT
TAATGCCTTTCCTTAGATCCAATGAGACAGAAACCAATACATCCTCTGTA
CAGCCATTTTTACTTCTTGTTTCTTACAGGGAAAGTCCTAGTACATGGCA
ATGGGGGCATATCCAGAAGGTATGTATACTGTGCAGATACTTGTGTAAAA
TTCATTATCATTGCATTGCATTAGGAACTTAAAGAGCTTTGGAAAGTCGT
CTTTTTTAACTGAATGTTGAAATGACATAAGCATCTTTTAATATCCTCCA
GAAGTTGCCCATATATTGTGTTACTTTTTATGCTTACAGTGCTGCTCTGG
TGATAGCTTACATGATGGAGACATATGGAATGACTTATAGGTGAGTTTTG
TCTCATAAGGCCACACCAACTTGATTTTATGGATGACATCCTCTGGAGAC
CCCAAAACTAATGCGCGCGGGCGAAAAAAAAGAAAATCCAGCACAAAAAA
AAATGCTGCTAAACCACAGGACTACTAGTACAAAGCTGGTATTGCGAACA
ATACTGGTATTGCGTACATGTAGGTTGTCTTGTTCATCATAGCAGACTCA
GCGCAAGTGATTGATTTTTAATATATTGACAAGAACGACCAAAGAAGTAT
ACTATTAGAAGGTATTTGGCTCCAAGGACTGTGGATGATATATGATTGTG
ATGAGAATACTTAGTCTAGTACTCATATACACCCATAAGGGCAGTTTCAA
CATACATGGCATTGAACTCCATATTAAGCATTCCATAGTTTACGCTCACA
AATCTCACTGTGAGACCTCTGCCAATCCCTCAATTCCTCTCCCATGTCTC
TCATTATTGCCAAAGAAACGTGTGAGAGCCACTCTGGATAGGTCGTGTTT
GAAATTGTCTGGGCGATTCTCTCGTACAACTGTAGAAACGCAAAATCCCC
CTAGCCAACATCGATGGCATATCAATCCACAAATACGCCCCGGTTTTTCG
ATAAGCCGGCACAATGCTAGCCTTTGCGGCAATCTAAGTCAGCAAGTTCC
GGAGTTCTGTGTAGCCTTGGAGGAGGTGATTTTTTCTGTGTTTTTTTTAC
AACAGGCGAAAATCAATGCGCGCGCGGATGTCATCCATAAGATTAAGATG
GTGTGGCCTAACTACATATTATTAATCATTTTTCTAGACAAATGCAGAGA
AGAGATCATCTACAAGTACAAACTCTGTATTTGATCACCCATGGATGCAT
CTATTCTAACAAGATCTATTTAGTGAGAAATATGGATGCACTGAAATACA
AAACAGGGATCTGTATACATTATATTTCTGTGTTTTTTGATGATTGTTGA
TTGTTGAATGTTGTTGTGTATTGTCAGAGCTGCGTTCCATCATGTACAAC
AGAGGAGATTCTGTATCCAGCCTAACGAGGGGTTTGCTAACCAGCTGATG
GAGTATGAACCCATCTACATGGCCAGACTCACCGTCAGACCTGGGACCTG
CTGGGGACAGAGCAACACACAGCTCCATGGTAACTCACGTCTCCATGGTA
ACACTCATCTCCATGGTAACACTCATCTCCATGGTAACATACTGTCCATG
GAAACATATGTGTGAATGGTAACATAATGTACAACTCCTTGGTGTAACAT
ACAAGTCCTTGGTAACACAATAGTACAATATTGCTTGGGGATTTTTCATT
AACTTAGAAAAGACATCAACAGGGGAATATCCACCACTTGCTTGCAAATA
GGTTGGCTTTCCACTAGAGACTTTTCAATGAAATTGTGTATGTATGAGAT
GATAAGAAAGTTCATGCATCTAAGTATGCATGAGTAAGGTCAAAGAGACA
TAAACAAACCATTGTTATGCAAATTGACCGTCAGTGTCTGGACATGTATA
AAGAATGGTTAAGGCAAGAACTGTTTGAAAGTCAGGTACTTAGAAATGTG
AACTTCCTTATAGACATAATGAGGCGATAGATTGCAATATGAAAAATTGA
CATAGCTACCTCATAATGAAGTATGAAGAGAAATTTTGTGTTATTGTTTT
CCTTCATCTCACCGTTGTTCCCCCCCAGGTGGTAGGAAACGGAGCCTGGA
TGAGGAGGCTGGGGAGGAGGCCATGGACCAGACAGGAGACCCTAGTCTGG
ACCCACAGAACAAGTCACATCATCTGGACACATGAGGCCGGACAGATGTG
CTCTCACAACTTACATATTCAATTTTGATTGACAGTACAATAATTACTGT
AAGATTGGGTTTAAGGGTCCATTTTCTTTGCAATATCACTCTGTGTTTGT
GTCCAAAACGTGTCTAAGAAAATTTGATGACTTGTGATGTCAAAACGTTG
TTTTTTTCCTGTCATCATAAAAGATTAGTTTATGACTACACATATAGGGG
CCTTGTAGTCCATACATACTTTAGTTTGGCAACTTGATATTCATTTCAAC
CCTTCGTGTAATCTGCAGGGTTGTGTTTTAAGTCATGGAGAATCATAAAA
GAATGTTGGTAGTCAATTCAACTTGTTGACAATGTAAGATATGTGGCTGA
CATTACTTGTGAAACGTTGTTGATTAATTTTACAGGGACCAAGGCTACAA
TTTTGGGTGCATATTTCTACATTGATTTTGCAATAATAATAGAAAGATTT
TTTCCATTTCACCAGCAATCAGTAGTTCCGCTTTGAGTTAACACGTAAAT
TCGTAACTGCAATGTCAGTGTAGTAGGTAGGGTGTACCATAATTATGAAA
AAATAACAACATTGTCCAATGTGCAAAATATGTATGTTGTAAAGTTCACA
GTATGCCCAAACTGCTACAGATCATATGTTTTTGTGTTGTTTGCTTTAGA
GATGGATGGGTTACGGTGGTACAACACTAGAGAAAAGTGGAATGCCATGT
GTATTAGGGTCGGATAAAATGTAACTTGGTTTGTTGTTCTTGTGAACGGT
AGCTTTTATAGCCATGTGTCAATCAAGTTATTGATGCTCTTGTCTTAGCA
TTAAAAAAGCATAACATTCTTATTGATATTACATGTTAGCTTCTATTCAC
TGATTTGGTGAAAAGGTAGCTTATAAGTAGTAGGGATAGAAACTAGTGGT
TTGTGTGTCAAACATGTATATGAACATATAATGTTACACGTGAAGATTTT
CACAGATACATGTATATGTATATGATGAGGACCATATTGTTATCAGGGTC
TACCACTGTGCCTTAGCTTTTCTTGTGTTACTTGTTTTTCACATTGATCT
GTGTACTCTTATAGACGATGTTGCAATTTTTGTGAGTGTTGCACATGTCA
AGTAGAAAGGGTTCTTGTTATGTTCTTGACATTTATGTAGCCATAGTGAC
AGGCTCTTGGGCCATATCAATTAACGTGTGGTAAGAGAACTTAGGAAACC
ATAGTGTACCAAGGCACCTGCCTATGGAAAGAGGTGGGGAGGGGGTCCCC
TTACTTTTGGGAAGAGTGCCTAAAGTATGCATAAAATGATGCATTTTAAG
CATGCTTTGTGCAAATTACTGATACACTATTCACCATCTGTACAGGGAAC
GTTAATCCGTTTACGCCAAAGTGTTGAACAAAATTTATCCCTTGAAGAGA
AATCTTTGGGAAAACAGGCCAATTGAGTACTATTACTAGATACCCTGTTT
GAATGGATTCTTATCAAGTACTTATTTACAAGTGAGCTCTGTGTACAACT
AAACACAAGAGGTAGGTGTGTACACATGTATGTCTGCATGTTTTCTGTGG
ATGTCCTGATCATTTGTCTAAAAGCCTCGTGTGTTCAGTACTGTAGTTGC
TAAGGTTCAACAACATTGTAAATATATGTAGCAACATCGCAATGGGTTAA
CGTTGGTTATCCACTACGCATTGTAGAGATCATAAAGGAGTCAGAGTCTA
CACTGAAATGTTATTGTAGATGTTTTCAGCAATATTTATATATCACTGTT
ACATAACTGATGATGTTTCTTGTATGTGCAAGTATGGACTGAGATGAACA
TGGCTATAACACAGTTGTAGGAAAGTAACCCCAGTACAAACAAACAAATG
TATATCCTTTGAATACTGCAAAACAACACAATAAACGTAGTCCAGGCAAC
TGTCTGTATGAAACTTTGCACTTTATTTCTAAGAGACCTCAAATACGTGA
CAATGATTTATCAGCAAAATGTTACAATGAAATCTAGGCGGCCCCTATTT
TGAGTGGTA Coding sequence (CDS) from alignment at Sc0000086:406580..413988- >Blg00336.2 ID=Blg00336.2|Name=Blg00336.2|organism=Branchiostoma lanceolatum|type=CDS|length=696bp|location=Sequence derived from alignment at Sc0000086:406580..413988- (Branchiostoma lanceolatum) ATGGAAGGAATCGTCACATCATTGGAGTTTCCGGAAGTCCCAAATAGCGA GGATGATACCAGGGACTGGAGCTACACCATGAGAAGAAGCATGCAGGAAA TCCTTCCCAATGTGTTCCTGGGGCCATACTCTGTAGCTACAAAGAGAAAT CTTTCCAACCTGTTGGAGTTAGGCATCACCCATGTAGTGTGTGTTAGAGA TACCCTGGAGGCTAAGATTATCAAACCAAACTTTTCAGATCATTTCAGAT ACTTGGTACTGGATGTTGCAGATAAAACCACAGAAAACATAATTCAACAC TTTCCTAAGGTTAAAGAATTCATGGACCAGTGTCTACAAACTGGAGGGAA AGTCCTAGTACATGGCAATGGGGGCATATCCAGAAGTGCTGCTCTGGTGA TAGCTTACATGATGGAGACATATGGAATGACTTATAGAGCTGCGTTCCAT CATGTACAACAGAGGAGATTCTGTATCCAGCCTAACGAGGGGTTTGCTAA CCAGCTGATGGAGTATGAACCCATCTACATGGCCAGACTCACCGTCAGAC CTGGGACCTGCTGGGGACAGAGCAACACACAGCTCCATGGTGGTAGGAAA CGGAGCCTGGATGAGGAGGCTGGGGAGGAGGCCATGGACCAGACAGGAGA CCCTAGTCTGGACCCACAGAACAAGTCACATCATCTGGACACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00336.2-exon-Sc0000086-1570713199:413343..413988 | Blg00336.2-exon-Sc0000086-1570713199:413343..413988 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:413163..413240 | Blg00336.2-exon-Sc0000086-1570713199:413163..413240 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:412694..412726 | Blg00336.2-exon-Sc0000086-1570713199:412694..412726 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:412269..412322 | Blg00336.2-exon-Sc0000086-1570713199:412269..412322 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:411849..411946 | Blg00336.2-exon-Sc0000086-1570713199:411849..411946 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:411427..411487 | Blg00336.2-exon-Sc0000086-1570713199:411427..411487 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:410781..410817 | Blg00336.2-exon-Sc0000086-1570713199:410781..410817 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:410620..410659 | Blg00336.2-exon-Sc0000086-1570713199:410620..410659 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:410399..410449 | Blg00336.2-exon-Sc0000086-1570713199:410399..410449 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:409260..409411 | Blg00336.2-exon-Sc0000086-1570713199:409260..409411 | Branchiostoma lanceolatum | exon |
Blg00336.2-exon-Sc0000086-1570713199:406580..408710 | Blg00336.2-exon-Sc0000086-1570713199:406580..408710 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000086 | genome | Sc0000086:406580..413988 - |
Properties
Property Name | Value |
GeneID | Blg00336 |
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