|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055462 ID=TCONS_00055462|Name=TCONS_00055462|organism=Clytia hemisphaerica|type=transcript|length=2093bp AAAATTTCTATAATCACACATGCTAAAAGTCCCCTATTTATTCTTTAGAG ATATGACtaaaacatgtatttttaaaaatctatatGCATCATTATTACCG AAACAAACGAAACAAATCTGTCAATTCAGTACAGCAACATCAAGAAGATA TAGCAAGAAAAATGCTGACACAAAGTTGATAGAAACTTCTGTCCGATATA ATGGCGTCCGAATTCAAATGCCACCAAATAAAGAATGGTCAAATGAACAA TTCGAATCCGAATTACTGAGGTTATCAGAAGGTTGGAGAGAGCGGGGTGC TCGTAGTGCATTCCTTGAAATTCCCATTCAAATGAGTCACGTGATACCAG TGGCCTCAAAGTATGGCTTTCAGTACCACCATGCACGTGGGCAGCAAGCA GTGTTATGCAAATGGTTAGTTGagaatgaagaaaataaaatcCCAAACTT TTCAAATCACACAGTAGGAGTGGCAGGGGCGTGTTATCGTGAAGATTCAA ACGAGCTACTAGTCGTCCGTGACAAAGGAAAGTTTTCCCATTGGTGGAAA TTCCCTGGTGGATATTCAGATTTAGGAGAATATATAGGTGAAACCGCAAC GCGTGAAGTGTTCGAAGAAACTGGTGTACGATCAGAATTCAAATCGATTT TGAGCTTCCGACAACACCACGGTGTTTTTTACGACCAATCCGATCTCTAC TACATATGTCGATTGAACCCGTTAACATACGAACTTTCACCGTGTCCTCA CGAAATCGAAGATTGTGCATGGAAAAATATCAACGAACTTTTAAACGTGG ATAACACAACACCTTTCGTCAAAATGATTTGCCGTTTAATGCAACATGGA CAAGAAGTCGGTTTCAATGAGGTCGATATCAGTGAGCATGATTTAGAGAA CTGGGCAAGACCTGGTAATCGAATGAAAATCTTTCACCGGAATATCGAAT CGTACCATGATTAAATTAAGTATTTGAACATGAGTATTTCATATTCATTT ACCATTCATACAAAGCCGGATTGTTGGATTGTTGATAAAAACAGAATAAA AGACGTATGATTTAAATCTAAGATTTGAGAATCTCCAAATGAAATTCAGA TTTTACATTGGTCTTGACTCAATGCTATGCTGTTCACCCATCATTTCAGT TTTTTCATTCAGAATTTCATTCCCTCCTCGTAATAGCCTAGTTTTGATGT TGCATCTCGATCATGTATTGTTGCAATGCTCTCGCTTGTAATGTATAGTT ACCATTGATAAGGCCGTTAGACTTGGTTGCAATTTTGCCAAACTTCCTAA ACTGTAAGAATGTTCTGAAAAGACTTAATATTTTAAGGCCTTCTTATTCT TCAACCACTCTGTCATCTGATAGGGTTACTGTTTATCATCCTGTCGAGGA ACTCCATTTGACTTTGGATGGCTTCGGtcctgatttttgccaatttatcG AAAATCTTAATTTCTGCACCAAGAATTACACCAAATAAATAGCAGGTCGT TAGGTAACTTTGCTACTAATTTTATCATTAGTCTCGATAGAACAGTCAAT GGTACTctcataaatttttcaaaaattcgtGTTACTGGTACAAGTACACA CACACATTTcgtaaactttttgaaaacttttgattcTCCGGATGGATTGG TGTTTACCAATGCGCATCCTTCAAGCTTGTCTTGATCATGTAGTCTACCT GATCCAACAGGTCTGACACATTCTTAATCCCATCCAATTTGCATgtagat ttttttgtaaaatattttgatcaaaattataATAGAATATGTTttataat attatattttatttttaatttcgccttagcgaaagtattacgataggcat gGTGTGATATCggacgaaaatttagaaaacgaaagtacttgatacggtgg acaaactcactaaaatcaatttacatattacacgctcgtataaccacgga agatcttcgcaggttttctttggattacgtcattataTTTTTGCGtctct ttagcttcacagttttgatttttctttattttcttataagcatatacttt ataagaatcaaatcaataactcttgatagacggtgacatacct Run BLAST on NCBI protein sequence of TCONS_00055462-protein >TCONS_00055462-protein ID=TCONS_00055462-protein|Name=TCONS_00055462-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MLKVPYLFFRDMTKTCIFKNLYASLLPKQTKQICQFSTATSRRYSKKNAD TKLIETSVRYNGVRIQMPPNKEWSNEQFESELLRLSEGWRERGARSAFLE IPIQMSHVIPVASKYGFQYHHARGQQAVLCKWLVENEENKIPNFSNHTVG VAGACYREDSNELLVVRDKGKFSHWWKFPGGYSDLGEYIGETATREVFEE TGVRSEFKSILSFRQHHGVFYDQSDLYYICRLNPLTYELSPCPHEIEDCA WKNINELLNVDNTTPFVKMICRLMQHGQEVGFNEVDISEHDLENWARPGN RMKIFHRNIESYHD Run BLAST on NCBI transcript from alignment at scaffold_253:1285650..1289407+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055462 ID=TCONS_00055462|Name=TCONS_00055462|organism=Clytia hemisphaerica|type=transcript|length=3758bp|location=Sequence derived from alignment at scaffold_253:1285650..1289407+ (Clytia hemisphaerica) AAAATTTCTATAATCACACATGCTAAAAGTCCCCTATTTATTCTTTAGAG
ATATGACtaaaacatgtatttttaaaaatctatatGCATCATTATTACCG
AAACAAACGAAACAAATCTGTCAATTCAGTACAGCAACATCAAGAAGATA
TAGCAAGAAAAATGCTGACACAAAGTTGATAGAAACTTCTGTCCGATATA
ATGGCGTCCGAATTCAAATGCCACCAAATAAAGAATGGTCAAATGAACAA
TTCGAATCCGAATTACTGAGTAAGTGAGATTTTGGTTGAGACTAAATTAT
GTATATTCACTcaagagaaaaagaaattgagaaattCACTGGGCAGtctt
gaaaccacaatcgatttgtaagtgctctaaattaggttcgaagattagag
ttttaactctgagttttaacgctagacttaatacttaggatctgaggatc
caaaagctcaaaaatagtccaataaggctcaggaTATAGCCTGAAAgact
gccaacccctcccaaattgaaatattcgattgaacaggggggggtcagaa
ggtggcatgtatcctggggtgggtgggtgtttgagaaaaaaatttgtcat
gtactacctgtgtactataattggggTGTTGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGATtgaattaaagagatagcccaaaatctcgccaga
actttaaatcttgaaaaacgttaaaataaccggaattctcaaaatatatt
ttctgaaaaggGCTCGGCAATAAACATGTTAGAATATCGCAAATTTTCGT
TCCAGGGTTATCAGAAGGTTGGAGAGAGCGGGGTGCTCGTAGTGCATTCC
TTGAAATTCCCATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGTAT
GGCTTTCAGTACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAATG
GTTAGTTGagaatgaagaaaataaaatcCCAAACTTTTCAAATCACACAG
TAGGAGTGGCAGGTAGGCTAAAATTATAGGTTCTTGATTTACTGCGTGAA
AAATGACAGATACAATCTGAGCCACGCATACTTCAAACAAAAGTCTATCA
CTCTTCTCAacgaaaaatttcatttaagtAAGATTCTTTTTGCATTTATT
TAACACGGTTACTTGATACTCAACTTAAACAACAACTAGAATATGAACTG
ATGATTCTGTCTATCTACGTCAAAAAGATCAGCATTTTATTTAACCTTGC
TCTTTCTTGTTTGTATTGATACCTGATAATTTTTCTGGTAGGGGCGTGTT
ATCGTGAAGATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGAAAGGTA
AAGACAATTGTACTTTCGACCAACTACAACTAAGAAGCCTAGATCTGCTC
TAAAAGATGTCACCGTCATATTTTGGGTGGATTTGCctccctttaaaaaa
atttcaaaacatctcaaaaaatattttgctcattCTGTCTAGCTCGTCCA
ATTACGTCCGGAAATGTGACAGCTTGCCCTATGCACCCTACCATACCGTT
TAGATTGATTTTTTGATTGACCCTTTTTCTCATAGTTTTCCCATTGGTGG
AAATTCCCTGGTGGATATTCAGATTTAGGAGAATATATAGGTAAGTATCT
GACTAATATTTAAcctgatttaaaatttaaaattgctaGAATTTGTCATA
GataaatagcccaaatcacgcatcaggTCTCAAATGTTTGTCCTATCAcg
ctatcacacaagaaaaaaggCCAAATAATGTCATAACAGCCTGTTAgaag
aaaaccgcttttttacgcagtttaacaaataaaaaatttatggTTGGCGA
AAAGTACTGTCTAACCATCACGCAAGTTGGTAGGGGGGGACTCATTCTAG
AAATATGAACTATTATTACTCGGTTTTNTGAAAGTACTGTCTATTCATCA
CGCAAGTTGGTAGGGGGGACTCATTCTAGAAATATGAACTATTATTACTC
AGTTTTGTTTCTGTacatacatttttataagcGCTGATCGACTCTTTTTC
ATAACTATTTGATAGGTGAAACCGCAACGCGTGAAGTGTTCGAAGAAACT
GGTGTACGATCAGGTAATAATGTATTAATTATGTTAAACATTACCAAATC
CATGGAAAAAGCTGTAAATACTTTCGAAACCCATTCTCAGTCTTAATCAA
CAAGAAATAAGATAATTTTAATTCGTCTTATTTTCGCAGAATTCAAATCG
ATTTTGAGCTTCCGACAACACCACGGTGTTTTTTACGACCAATCCGATCT
CTACTACATATGTCGATTGAACCCGTTAACATACGAACTTTCACCGTGTC
CTCACGAAATCGAAGATTGTGCATGGAAAAATATCAACGAACTTTTAAAC
GTGGATAACACAACACCTTTCGTCAAAATGATTTGCCGTTTAATGCAACA
TGGACAAGAAGTCGGTTTCAATGAGGTCGATATCAGTGAGCATGATTTAG
AGAACTGGGCAAGACCTGGTAATCGAATGAAAATCTTTCACCGGAATATC
GAATCGTACCATGATTAAATTAAGTATTTGAACATGAGTATTTCATATTC
ATTTNGATATCGAATCGCACCATGATTAAATTAAGTATTTGAACATGAGT
ATTTCATATTCATTTACCATTCATACAAAGCCGGATTGTTGGATTGTTGA
TAAAAACAGAATAAAAGACGTATGATTTAAATCTAAGATTTGAGAATCTC
CAAATGAAATTCAGATTTTACATTGGTCTTGACTCAATGCTATGCTGTTC
ACCCATCATTTCAGTTTTTTCATTCAGAATTTCATTCCCTCCTCGTAATA
GCCTAGTTTTGATGTTGCATCTCGATCATGTATTGTTGCAATGCTCTCGC
TTGTAATGTATAGTTACCATTGATAAGGCCGTTAGACTTGGTTGCAATTT
TGCCAAACTTCCTAAACTGTAAGAATGTTCTGAAAAGACTTAATATTTTA
AGGCCTTCTTATTCTTCAACCACTCTGTCATCTGATAGGGTTACTGTTTA
TCATCCTGTCGAGGAACTCCATTTGACTTTGGATGGCTTCGGtcctgatt
tttgccaatttatcGAAAATCTTAATTTCTGCACCAAGAATTACACCAAA
TAAATAGCAGGTCGTTAGGTAACTTTGCTACTAATTTTATCATTAGTCTC
GATAGAACAGTCAATGGTACTctcataaatttttcaaaaattcgtGTTAC
TGGTACAAGTACACACACACATTTcgtaaactttttgaaaacttttgatt
cTCCGGATGGATTGGTGTTTACCAATGCGCATCCTTCAAGCTTGTCTTGA
TCATGTAGTCTACCTGATCCAACAGGTCTGACACATTCTTAATCCCATCC
AATTTGCATgtagatttttttgtaaaatattttgatcaaaattataATAG
AATATGTTttataatattatattttatttttaatttcgccttagcgaaag
tattacgataggcatgGTGTGATATCggacgaaaatttagaaaacgaaag
tacttgatacggtggacaaactcactaaaatcaatttacatattacacgc
tcgtataaccacggaagatcttcgcaggttttctttggattacgtcatta
taTTTTTGCGtctctttagcttcacagttttgatttttctttattttctt
ataagcatatactttataagaatcaaatcaataactcttgatagacggtg
acatacct Coding sequence (CDS) from alignment at scaffold_253:1285650..1289407+ >TCONS_00055462 ID=TCONS_00055462|Name=TCONS_00055462|organism=Clytia hemisphaerica|type=CDS|length=5670bp|location=Sequence derived from alignment at scaffold_253:1285650..1289407+ (Clytia hemisphaerica) ATGCTAAAAGTCCCCTATTTATTCTTTAGAGATATGACtaaaacatgtat ttttaaaaatctatatGCATCATTATTACCGAAACAAACGAAACAAATCT GTCAATTCAGTACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGAC ACAAAGTTGATAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAAT GCCACCAAATAAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGA GGTTATCAGAAGGTTGGAGAGAGCGGGGTGCTCGTAGTGCATTCCTTGAA ATTCCCATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGTATGGCTT TCAGTACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAG TTGagaatgaagaaaataaaatcCCAAACTTTTCAAATCACACAGTAGGA GTGGCAGGGGCGTGTTATCGTGAAGATTCAAACGAGCTACTAGTCGTCCG TGACAAAGGAAAGTTTTCCCATTGGTGGAAATTCCCTGGTGGATATTCAG ATTTAGGAGAATATATAGGTGAAACCGCAACGCGTGAAGTGTTCGAAGAA ACTGGTGTACGATCAGAATTCAAATCGATTTTGAGCTTCCGACAACACCA CGGTGTTTTTTACGACCAATCCGATCTCTACTACATATGTCGATTGAACC CGTTAACATACGAACTTTCACCGTGTCCTCACGAAATCGAAGATTGTGCA TGGAAAAATATCAACGAACTTTTAAACGTGGATAACACAACACCTTTCGT CAAAATGATTTGCCGTTTAATGCAACATGGACAAGAAGTCGGTTTCAATG AGGTCGATATCAGTGAGCATGATTTAGAGAACTGGGCAAGACCTGGTAAT CGAATGAAAATCTTTCACCGGAATATCGAATCGTACCATGATTAAATGCT AAAAGTCCCCTATTTATTCTTTAGAGATATGACtaaaacatgtattttta aaaatctatatGCATCATTATTACCGAAACAAACGAAACAAATCTGTCAA TTCAGTACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGACACAAA GTTGATAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAATGCCAC CAAATAAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGAGGTTA TCAGAAGGTTGGAGAGAGCGGGGTGCTCGTAGTGCATTCCTTGAAATTCC CATTCAAATGAGTCACGTGATACCAGTGGCCTCAAAGTATGGCTTTCAGT ACCACCATGCACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAGTTGag aatgaagaaaataaaatcCCAAACTTTTCAAATCACACAGTAGGAGTGGC AGGGGCGTGTTATCGTGAAGATTCAAACGAGCTACTAGTCGTCCGTGACA AAGGAAAGTTTTCCCATTGGTGGAAATTCCCTGGTGGATATTCAGATTTA GGAGAATATATAGGTGAAACCGCAACGCGTGAAGTGTTCGAAGAAACTGG TGTACGATCAGAATTCAAATCGATTTTGAGCTTCCGACAACACCACGGTG TTTTTTACGACCAATCCGATCTCTACTACATATGTCGATTGAACCCGTTA ACATACGAACTTTCACCGTGTCCTCACGAAATCGAAGATTGTGCATGGAA AAATATCAACGAACTTTTAAACGTGGATAACACAACACCTTTCGTCAAAA TGATTTGCCGTTTAATGCAACATGGACAAGAAGTCGGTTTCAATGAGGTC GATATCAGTGAGCATGATTTAGAGAACTGGGCAAGACCTGGTAATCGAAT GAAAATCTTTCACCGGAATATCGAATCGTACCATGATTAAATGCTAAAAG TCCCCTATTTATTCTTTAGAGATATGACtaaaacatgtatttttaaaaat ctatatGCATCATTATTACCGAAACAAACGAAACAAATCTGTCAATTCAG TACAGCAACATCAAGAAGATATAGCAAGAAAAATGCTGACACAAAGTTGA TAGAAACTTCTGTCCGATATAATGGCGTCCGAATTCAAATGCCACCAAAT AAAGAATGGTCAAATGAACAATTCGAATCCGAATTACTGAGGTTATCAGA AGGTTGGAGAGAGCGGGGTGCTCGTAGTGCATTCCTTGAAATTCCCATTC AAATGAGTCACGTGATACCAGTGGCCTCAAAGTATGGCTTTCAGTACCAC CATGCACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAGTTGagaatga agaaaataaaatcCCAAACTTTTCAAATCACACAGTAGGAGTGGCAGGGG CGTGTTATCGTGAAGATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGA AAGTTTTCCCATTGGTGGAAATTCCCTGGTGGATATTCAGATTTAGGAGA ATATATAGGTGAAACCGCAACGCGTGAAGTGTTCGAAGAAACTGGTGTAC GATCAGAATTCAAATCGATTTTGAGCTTCCGACAACACCACGGTGTTTTT TACGACCAATCCGATCTCTACTACATATGTCGATTGAACCCGTTAACATA CGAACTTTCACCGTGTCCTCACGAAATCGAAGATTGTGCATGGAAAAATA TCAACGAACTTTTAAACGTGGATAACACAACACCTTTCGTCAAAATGATT TGCCGTTTAATGCAACATGGACAAGAAGTCGGTTTCAATGAGGTCGATAT CAGTGAGCATGATTTAGAGAACTGGGCAAGACCTGGTAATCGAATGAAAA TCTTTCACCGGAATATCGAATCGTACCATGATTAAATGCTAAAAGTCCCC TATTTATTCTTTAGAGATATGACtaaaacatgtatttttaaaaatctata tGCATCATTATTACCGAAACAAACGAAACAAATCTGTCAATTCAGTACAG CAACATCAAGAAGATATAGCAAGAAAAATGCTGACACAAAGTTGATAGAA ACTTCTGTCCGATATAATGGCGTCCGAATTCAAATGCCACCAAATAAAGA ATGGTCAAATGAACAATTCGAATCCGAATTACTGAGGTTATCAGAAGGTT GGAGAGAGCGGGGTGCTCGTAGTGCATTCCTTGAAATTCCCATTCAAATG AGTCACGTGATACCAGTGGCCTCAAAGTATGGCTTTCAGTACCACCATGC ACGTGGGCAGCAAGCAGTGTTATGCAAATGGTTAGTTGagaatgaagaaa ataaaatcCCAAACTTTTCAAATCACACAGTAGGAGTGGCAGGGGCGTGT TATCGTGAAGATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGAAAGTT TTCCCATTGGTGGAAATTCCCTGGTGGATATTCAGATTTAGGAGAATATA TAGGTGAAACCGCAACGCGTGAAGTGTTCGAAGAAACTGGTGTACGATCA GAATTCAAATCGATTTTGAGCTTCCGACAACACCACGGTGTTTTTTACGA CCAATCCGATCTCTACTACATATGTCGATTGAACCCGTTAACATACGAAC TTTCACCGTGTCCTCACGAAATCGAAGATTGTGCATGGAAAAATATCAAC GAACTTTTAAACGTGGATAACACAACACCTTTCGTCAAAATGATTTGCCG TTTAATGCAACATGGACAAGAAGTCGGTTTCAATGAGGTCGATATCAGTG AGCATGATTTAGAGAACTGGGCAAGACCTGGTAATCGAATGAAAATCTTT CACCGGAATATCGAATCGTACCATGATTAAATGCTAAAAGTCCCCTATTT ATTCTTTAGAGATATGACtaaaacatgtatttttaaaaatctatatGCAT CATTATTACCGAAACAAACGAAACAAATCTGTCAATTCAGTACAGCAACA TCAAGAAGATATAGCAAGAAAAATGCTGACACAAAGTTGATAGAAACTTC TGTCCGATATAATGGCGTCCGAATTCAAATGCCACCAAATAAAGAATGGT CAAATGAACAATTCGAATCCGAATTACTGAGGTTATCAGAAGGTTGGAGA GAGCGGGGTGCTCGTAGTGCATTCCTTGAAATTCCCATTCAAATGAGTCA CGTGATACCAGTGGCCTCAAAGTATGGCTTTCAGTACCACCATGCACGTG GGCAGCAAGCAGTGTTATGCAAATGGTTAGTTGagaatgaagaaaataaa atcCCAAACTTTTCAAATCACACAGTAGGAGTGGCAGGGGCGTGTTATCG TGAAGATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGAAAGTTTTCCC ATTGGTGGAAATTCCCTGGTGGATATTCAGATTTAGGAGAATATATAGGT GAAACCGCAACGCGTGAAGTGTTCGAAGAAACTGGTGTACGATCAGAATT CAAATCGATTTTGAGCTTCCGACAACACCACGGTGTTTTTTACGACCAAT CCGATCTCTACTACATATGTCGATTGAACCCGTTAACATACGAACTTTCA CCGTGTCCTCACGAAATCGAAGATTGTGCATGGAAAAATATCAACGAACT TTTAAACGTGGATAACACAACACCTTTCGTCAAAATGATTTGCCGTTTAA TGCAACATGGACAAGAAGTCGGTTTCAATGAGGTCGATATCAGTGAGCAT GATTTAGAGAACTGGGCAAGACCTGGTAATCGAATGAAAATCTTTCACCG GAATATCGAATCGTACCATGATTAAATGCTAAAAGTCCCCTATTTATTCT TTAGAGATATGACtaaaacatgtatttttaaaaatctatatGCATCATTA TTACCGAAACAAACGAAACAAATCTGTCAATTCAGTACAGCAACATCAAG AAGATATAGCAAGAAAAATGCTGACACAAAGTTGATAGAAACTTCTGTCC GATATAATGGCGTCCGAATTCAAATGCCACCAAATAAAGAATGGTCAAAT GAACAATTCGAATCCGAATTACTGAGGTTATCAGAAGGTTGGAGAGAGCG GGGTGCTCGTAGTGCATTCCTTGAAATTCCCATTCAAATGAGTCACGTGA TACCAGTGGCCTCAAAGTATGGCTTTCAGTACCACCATGCACGTGGGCAG CAAGCAGTGTTATGCAAATGGTTAGTTGagaatgaagaaaataaaatcCC AAACTTTTCAAATCACACAGTAGGAGTGGCAGGGGCGTGTTATCGTGAAG ATTCAAACGAGCTACTAGTCGTCCGTGACAAAGGAAAGTTTTCCCATTGG TGGAAATTCCCTGGTGGATATTCAGATTTAGGAGAATATATAGGTGAAAC CGCAACGCGTGAAGTGTTCGAAGAAACTGGTGTACGATCAGAATTCAAAT CGATTTTGAGCTTCCGACAACACCACGGTGTTTTTTACGACCAATCCGAT CTCTACTACATATGTCGATTGAACCCGTTAACATACGAACTTTCACCGTG TCCTCACGAAATCGAAGATTGTGCATGGAAAAATATCAACGAACTTTTAA ACGTGGATAACACAACACCTTTCGTCAAAATGATTTGCCGTTTAATGCAA CATGGACAAGAAGTCGGTTTCAATGAGGTCGATATCAGTGAGCATGATTT AGAGAACTGGGCAAGACCTGGTAATCGAATGAAAATCTTTCACCGGAATA TCGAATCGTACCATGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00055462-exon-scaffold_253-1491911889:1285650..1285918 | TCONS_00055462-exon-scaffold_253-1491911889:1285650..1285918 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1285650..1285918 | TCONS_00055462-exon-scaffold_253-1510915933:1285650..1285918 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1285650..1285918 | TCONS_00055462-exon-scaffold_253-1575043694:1285650..1285918 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1286455..1286661 | TCONS_00055462-exon-scaffold_253-1491911889:1286455..1286661 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1286455..1286661 | TCONS_00055462-exon-scaffold_253-1510915933:1286455..1286661 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1286455..1286661 | TCONS_00055462-exon-scaffold_253-1575043694:1286455..1286661 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1286941..1286996 | TCONS_00055462-exon-scaffold_253-1491911889:1286941..1286996 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1286941..1286996 | TCONS_00055462-exon-scaffold_253-1510915933:1286941..1286996 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1286941..1286996 | TCONS_00055462-exon-scaffold_253-1575043694:1286941..1286996 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1287235..1287289 | TCONS_00055462-exon-scaffold_253-1491911889:1287235..1287289 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1287235..1287289 | TCONS_00055462-exon-scaffold_253-1510915933:1287235..1287289 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1287235..1287289 | TCONS_00055462-exon-scaffold_253-1575043694:1287235..1287289 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1287715..1287762 | TCONS_00055462-exon-scaffold_253-1491911889:1287715..1287762 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1287715..1287762 | TCONS_00055462-exon-scaffold_253-1510915933:1287715..1287762 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1287715..1287762 | TCONS_00055462-exon-scaffold_253-1575043694:1287715..1287762 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1287889..1288232 | TCONS_00055462-exon-scaffold_253-1491911889:1287889..1288232 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1287889..1288232 | TCONS_00055462-exon-scaffold_253-1510915933:1287889..1288232 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1287889..1288232 | TCONS_00055462-exon-scaffold_253-1575043694:1287889..1288232 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1491911889:1288294..1289407 | TCONS_00055462-exon-scaffold_253-1491911889:1288294..1289407 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1510915933:1288294..1289407 | TCONS_00055462-exon-scaffold_253-1510915933:1288294..1289407 | Clytia hemisphaerica | exon |
TCONS_00055462-exon-scaffold_253-1575043694:1288294..1289407 | TCONS_00055462-exon-scaffold_253-1575043694:1288294..1289407 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_253 | supercontig | scaffold_253:1285650..1289407 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0016787 | hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0016787 |
hydrolase activity |
Blast
BLAST of TCONS_00055462 vs. Swiss-Prot (Human)
Match: NUDT6 (Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens GN=NUDT6 PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 4.483e-54 Identity = 96/257 (37.35%), Postives = 150/257 (58.37%), Query Frame = 2
Query: 194 RYNGVRIQMP---PNKEWSNEQFESELLRLSEGWRERGARSAFLEIPIQMSHVIPVASKYGFQYHHARGQQAVLCKWLVENEENKIPNFSNHTVGVAGACYREDSNELLVVRDKGKFSHWWKFPGGYSDLGEYIGETATREVFEETGVRSEFKSILSFRQHH---GVFYDQSDLYYICRLNPLTYELSPCPHEIEDCAWKNINELLNVDNTTPFVKMICRLMQHGQEVGFNEVDISEHDLENWARPGNRMKIFHRNI 946
R+ G+ +++ F+ L + WR G + +L IPI S I A+ GF +HHA + L WL E +++P +++H VGVAGA + E + ++LVV+D+ K + WKFPGG S+ E IG+TA REVFEETG++SEF+S+LS RQ H G F +SD+Y ICRL P ++ ++ C E C W ++N+L +NTTP + RL+ +G GF+++D++ +L G K++H+ +
Sbjct: 52 RFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESDSSTLTLWLREGP-SRLPGYASHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAF-GKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPA-VYTGLFYKLYHKEL 305
The following BLAST results are available for this feature:
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