TCONS_00054653 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054653
Unique NameTCONS_00054653
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054653 ID=TCONS_00054653|Name=TCONS_00054653|organism=Clytia hemisphaerica|type=transcript|length=2294bp
TTAAGATATTTGGTGATTGTGAACAAAACTAAAGCATAGAGGGCGTGACG
GTGAAATTAGTAGTAATTCAACATTATAAACAAACAAGAggaaaacaaat
aaacaaatataaTATTCAATGAAGAAGAATGGTACAAGACAACATTATCA
ATCTCATCAAAACAACACTACATCCAATCCCTATTGTCTTTGGTGAGAAA
TACAACAAAACAGATAGTAGTAGTGGATTGAATAACAATCGTTTACTTGT
TCCAACATCAGGTATCACCAATGTCAGCTCAAATAATTATCCAGAAATAC
CTCTGGGTACAGAGATTGGTATTTCCACAGCTGTCTTCGCCGGCCTTGGT
ATTCTCATTAATGCTTTGGTAATAACGGTTATAGTCATGGCCAAAACAAG
ACAATATTCTACATATAAACATCTAATGCTACATTTGGCAGCCTGTGATT
TTCTATGTTCAATTATGTTATTGCCTTACGTGCCGTTAGAATTGAAAAGT
CATTATTGGACCTATCCAGATGCAACATGTCAAATCATCTATCCAACAAT
ATCTCTCCTGACCAATGTTTCGACAGGGACGATTTTGATTATAACCATTG
AACGATTCAGAGGCGTTTGGTTCCCACACGCCCGTCAATGGGGCGGAACA
GACGTAAAGAAAGCATTCGCCATTGTCTGGCTCATAAGTCTTGTATCCGT
ACTACCCAATATCATCATGTTACGTGTGAAACAATATGACAATATAATAT
ATTGTAATGAGGTTTGGGATGAAAACGATCCCACTTATAAGCGTTTGTAT
GGATTCTCATTTTTGGctgtttcttttttcattccATTACTGGGAATTAC
TATCATGCACACCTTGATTATCTGTCGATTGAAATATAAAGAACTCACAC
CGGACAACATGTCAGCTCACCAGCAACGACAGAACCAACGCATTATGAGA
GTTCTAACTGGTATTATAGCAGTCTTCTTCTGCACTGTCAGCCCAAACAA
GATATTGTATTTCGTCTGGGATGTGGACCCCCAGTTGGAAAAGGACTTGG
AATCAAATACACGATATTATTTAAGGACAGTACAGTTTTTCTACTGGTCT
CGAGTAGCTATCAACCCTATGATTTATTGCTTCTTTGATACACGTTtcaa
gaaagatttcaaaaagtcCACTAGAAGGATGCGTGGCTTGAGTATAAGAG
ACAGTGAAGTTCGAAGCCGATCGGCTAGCCAACGCACTTCCACAATACTC
TCCGTACGATCAAGAGCGAACAGTAGCTTTATAGGCGAGGCGGAAGAAGC
TATCTCTCGATGTAACCGTATGAGTAAGATCTCCGAAATGGATGCAACGT
CTTTGCAAACGTTCGTTGAAGACAGGGGACGTCGCGTACGTTCAGCCACG
GTAGATACGGACCTAAGTGTCTCACCAATGGCCCACAGCACATTGGTAAA
ACAAGGATCTAGATAAATCGAAATTTATTATTGTATATGAGGTTCtcgtt
ttataagaactttaatATTTGTTAGGTGTATTATAAAATGCCGTACTTAG
GTTAACAACTCCTTCCGCCCTGTTCGAGTCTGACCAAGATTGGGGTATAA
TAGGGGAGTGGCAAAATTTCGTCGAAAAGTGCTTAAGCTGAAAGTTTACG
CCTCACGTTTTTTATTACTTCACTCACTATAAAAAGGAGACATTTGGCTT
CCACTTTTTTACAACTTGATGGCTTTTAAGTAcgttttttcctctttttg
aacATTTATATTGCCAACTTCAACGACTTCAATTTAATTGACTCGATGAA
ACATGTTTTAGCGATAATTGCTCCGACTGTCATGTAGTTTCCAATCCTTG
ttttaaatgtatatttttCGGAAAGCAACAGAATCTAACGTTATACAGTT
AACATTAGATTATActtgttgaaaaatgaaaaatttgcaaGTAACAATAG
CTAATCAGATACAGATATGATATCTGTGGCCAAACCAAAGACCTAAATAC
TTGTACTGATCGAATAAAATTCATGATGAAGCTTATTATCATATTATGTT
ATAAAGATTGTATCTAATATACATCATATCATTTTTCTTGCATTTATATA
GAAACAAGTATTATTACAAATATATATTGtataaaatattataataatga
ttatttttaataGGTATTCTTTCATATGTATGATAGTCCCCTCCTTGTAA
AATTCTTGTAGCTTATTATACtcattatatttttaaaaagtcaTATACAT
TATAGTATCAAAAAGAGAAAACTAAAGTTATACTCACAAAAACA
Run BLAST on NCBI

protein sequence of TCONS_00054653-protein

>TCONS_00054653-protein ID=TCONS_00054653-protein|Name=TCONS_00054653-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
MVQDNIINLIKTTLHPIPIVFGEKYNKTDSSSGLNNNRLLVPTSGITNVS
SNNYPEIPLGTEIGISTAVFAGLGILINALVITVIVMAKTRQYSTYKHLM
LHLAACDFLCSIMLLPYVPLELKSHYWTYPDATCQIIYPTISLLTNVSTG
TILIITIERFRGVWFPHARQWGGTDVKKAFAIVWLISLVSVLPNIIMLRV
KQYDNIIYCNEVWDENDPTYKRLYGFSFLAVSFFIPLLGITIMHTLIICR
LKYKELTPDNMSAHQQRQNQRIMRVLTGIIAVFFCTVSPNKILYFVWDVD
PQLEKDLESNTRYYLRTVQFFYWSRVAINPMIYCFFDTRFKKDFKKSTRR
MRGLSIRDSEVRSRSASQRTSTILSVRSRANSSFIGEAEEAISRCNRMSK
ISEMDATSLQTFVEDRGRRVRSATVDTDLSVSPMAHSTLVKQGSR
Run BLAST on NCBI

transcript from alignment at scaffold_243:594803..603137-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054653 ID=TCONS_00054653|Name=TCONS_00054653|organism=Clytia hemisphaerica|type=transcript|length=8335bp|location=Sequence derived from alignment at scaffold_243:594803..603137- (Clytia hemisphaerica)
TTAAGATATTTGGTGATTGTGAACAAAACTAAAGCATAGAGGGCGTGACG GTGAAATTAGTGAGTTTATTTTATCTTTACTTTTCTGCGACATCCTGACA GGAGATGACGGTTACACGTTTTTTTTTTATTAGAACCCAGTTTATAAGAA CATTGAGGCTGAAATTCGTCGAAAAATTAAGAACATCGTAAGAACATGGG CCATTCTCAGTTTGGAAAAAAATGACAAGAAACTACAATTTTTCCCTTTT TTCAAGTTTTTTTAACTGAACTTAGGGATGGATTTTCTAAAATCGAGAGT CAAATATTGTCCAAATTTTACCAATTTTAAAAGTGCTCTTTACTTTGCAT GATATTGTCTGAAAAATTACGAACGCATTTAAGAACATTTTAGGCTGAAA ATTGCTAAAAAAAATCAGCACATCCAGGCTCAGCCAAATTTTAGGTGTTC TAATAAAAAAAAGGTGTAATCAATATTTTTACCGTCCTCAAAAGTGCTAA TACCTAAACTAGCTATTGTTGTGCAAATACNTAATCAATATTTTTACCGT CTTCAAAAGTGCTAATACCTAAACTAGCTATTGTTGACCGAATACTGGAT GATAGGTATCTCGTCTTTGCCACGAATATGGCGGAATACATCTTCCTTAT TTTCGACAACAGAAATACTGTATTGGTCAATCTTCAAATATTGAATAAAT CTGAATTTTAATTGGTAAATGCTTTCTTCAAACTTTTTCGGTTTGTCGAG GGTGGCTTCGTCAGAAAAATTTCAAAGCGTGTGAATTTTAAGATGGGCGG TAATAAGGGTAATAAGCTTTGTATGAGACACAAAAAATGTCCAGTTGGTG TATCTTTCCTATTTAGGTTAAAAAGTTGTAGACTTTTAATTGGATGGAAT CCAGGGGGTTTTTCTCACCAGGTGTTTGCCACGAATTACGTACAGTTGAC TCTCGCAAATTCGAATTCGAACGGGGAATCTTATTTGTTCGAATTACAGA GAGATTCGAATTATAGAAAGTATACTAAGTAAGAGGGTTTCTCGACGGGG ATGGGGAATAAGTTGGAATTGTAGAAAGACTCGAATAATATAATTCGAAT AGGCGAGAGTCTACATATCTGACGCTAGTGTAAGAAAAGCCGGTCTTTCC TAAGGTGCTCCCGTTAAAATAAAATCGTCTTCGATAAAATGAAATTCCAT GACAATTCGTCATCGATCCTTATTATTTTAAAATATTAATTGATAATATT TTTGATACTGAATAGAAATGGGGCTTGTTTTTACCCTCTTTTTTCTCTTG ATGTGTGAAAAAACTTACGTAAGGATAAGGGTATTAGTTAGCCCTAAGGG AAATCTACAACAATTTTTGAAGAAAATTAATAAAAAAATCTCTTCATTTA AAAAAAGACTGTAATAAGAATTTCGTTTCCCTCTAAAAACGAACCCGTAG GAAAATTTTGAAAAATCAAAAATATATATAATACCATACATATTAAATAC AGATTTTTTTCATTTACAAATTTTTCAGTTAGCTTATACTTTTTTTCTCG AAAGGGTTGGGAAAAAAATTAATATTTGAATGTTGGGTAACAAAAAAGAA AATTGATAAATAAAAATCTCATTTTTCATGATCAAACAAAATTGTTAAAT AACAACACCACCTCTGGGATTTGATTTTTATACAATTCCACAGTTACTGT ATTTTGCTTTTGAATTTCAATAAGACTTGGGTAAAAAAATAATGTTCAAT ATTTTTTTGCATTTATCATTCACGAGATTCTCTACTGAGCATCTCGACGA AAGATGTACAACACTTAAGAAAGATTATGCAAAAAAGGGTTATGACCATG GCAAAGGTGAAATTAAGGTTATATAAATTCAAAGGTATTGGATGGTTAGA GGGGTGAGGGGTGAGGATAGATATTAACCGGGTGCAATAAAAAAAAATCA TAAGTTAATCATGTAAATTTACCCCTTCAAGGGGCAAAAAGCCATGCTTG TTGCTTGGAGGCGTCAAACAAGCTGTCCAGGAGTCAAAGTTATTTGACAG AGGTTTGAAATTCTCAGGGTCAACCCCCCCCCTCCTCCATGAAACTTTTC TTTCTTAGGCCATTGAAGTTCTGTATCGTTCTAATCCAGCGTTTAAGCGA GGTCAAAACGACGTTTATTCAACGTTTTTAACTTGTTGAAACCGATATAA GACCAGTCTAAGCTTATCCCAATAAAAGTTAACGATGATAGATTTTACAA CGTCACAAATTATGTAATAAACCTTCCATGGCTGTGTATATTCATGATGA TCTGATTCAATGGATAGCTATAGCTTTGGCGTAATTCTTACAATTAGGCG TAAAAAAATTCTCGAGTAAAAGAGAATTTTGTAGCAGTTCTTGGAGTAGT AGAACTAGATTTCCCAATCAAGGGAAATACTAGTGGTTATTTTAATTCTT AGGAATATTCAGAAATACGGTAAAATTCTCAAGATATTTATTGATTTAGT AATTTTAAATCCAGAATATACTATTCAAAAAGAAAAGTAAGGAGTTGCAA CATTCCATCTTTTGGTGAAGGCATTAGACTCGTACCTTTGGAAATTAAAA ATCAAGCTAGTGTTCTAAATTAGTTTTACATATATAAATTCTTTATGGTT GATTTCTCTCATAACTAGATTCCAGAAAGTTTTTAAATATTGTCAACAGG AAAGCTAGACAAGGCTTAAAGTATAAATTTTTTAAGAAACAATAAATCAA TATTTTTTTGATAAAACCTTCTTAGCACTGAAAGCTTATCGTTTTGTTAA CTTGACATAATTCGCTATAAATAGAGCACGAGCGTGTATATATGAAATCA ACAACACGCAAAAATGTCAAGTTATACATGTTATTTAAAACCAAAACGTT CAAATAAAAATTCTCTAAGATTTCATTCATACTCTTAAAAACTTTTTGTA AGGATGTTTACAAAATATCGGCTTAACTACACTGACGAGGTCATTTTCCT ATTTACTGAGCAAACTTTTTTAACCTGACTTTATACTTATACATACAAGC TTTATCAATTACAGCAGTTGTAAAAAAAACTTGTAAAATTTTAAGTCGTA AACAGCTCTATCAGGTATCATTTAAAGACGTTTTAAAAACGTTCTGTAAC ATGTCAAAAACAGAGTGATCGAAAATACATGTTCGAAAGCAAAGTCCTAC AGGATAAATAAGAATGCCACATAATATAAGTTCAAAACATTTATTAAGTG AAGTTGGTTAGGTTATTTTTCTGTTTCACTAGATCTTTATGATGTTTTGT ATTAACACTGTGGTTATTTCAATGGCAACACCCTTTATTAGACTGTTTTG GGTCGTATGAAACACATTCTAGATCTATGTATATTAGATAACGTTNCACA CCCTTTATTAGACTGTTTTGGTCGTATGAAACACATTCTAGATCTATGTA TATTAGATAACGTTAATCACATATCAATATGTAATAGTTATCGGACAGTT GCGAGTACAATATGAGAAATATTTTACGAGTTTCGAGATTTTTCCGTACA ATATTTTCCGAGCCTGTAGGCGAGGAAAATATACGGAAAATCCGGAACGA GTAAAATATTTCCATATTGTACGACCAGTAAAATTTTTATGAGACTCGAC TGTTCTTATTTTTTTGGCAATTTGAGCCTCAAATAGTTCTTATCCTGTTC TTATTGAAAGAGTGTAATTGAGGTATTTTATACCCAATTTTTACTATAGG GGTCAACCCTAAACTTTAGTTTAGACGACCGACCTTCGGCCCTACCTAAT CTAATTGTTAGAGTAGGCAAAAAGTTTGTTTAAAAAAAGACGTAAAAAAC TTGGCAAGGAATGGATGGATGGATGAATAGGCAAATTGTTTTTAAAGTAA AAGGGTACAATACGATACAAAATAGAAGGTTTACATTATTCGTCATTGAC AAGTAGAAAAAAAATACCCTATCAATCTCATGACTAAAATCTGACGTAAA GGGACAAATAGGATGTTTTTTTCTTCTAAATGGTATAAATACCCAGATTA TGTCAAATTTGTTTTTCAAATACAACACAATACTGGTTATAAAGTAAAAA ACAACACATCAAATGTTACAGTGTACGATGGTAGAGGTGAGAGTTTTGAG ACTTGTTCATATTCTTAAGTACTGGGAAAAAAACTTCTAATTCCTAAATG GTATCTTAACAGTATTCTATAAACTATTTTGAGGTGATTTTAGTCTAATT TACAAAAAAATTGTCAATCTTGGTCAAGTGCAACATACATAGTGAAATGT TTGGCAAAGTCTAGTAGTTTTATTTTGTTTTTACTAATATAGTCTTTGAA AGTGTCTGTAGAAGGCTTTTTATACAAGGGACATCGAAGAAGTGATTTAG CAACCTGAGTTACAAATCTAGAATGGTGCACCAAGGCAAAATGGTTCTCT CAAAAGAGTACAAAACCATGAAAAAGCAATCCAGTCTATCTAAAATGATT CCCTCAAAGAGTCAATTTTTGGAATTTCGACAAAAATTTGACAATTTTAG CTTAAATTTTGGGAAAATAGTCTCAACGATATCATTTTGGACAAAATTTT CTAAATTCAGTCTCCCTTAGAAAAAAACTCAATCTTTTGAACTGAGTAGA ATATTTCAGATAGAAGTGAAATAGGAGAGGTTCCAATTGGAAAGCTTTAA TTTCATTTTGTGAAGATTTCTTTGATGAGAATGATAGTGAATGAAAAGCT GCATAAATATGGGCCTATGTATGAGGTAGTTATAAAGGCTAATATTCCAC TGAAACGTAAATTAAACTTTTTCGTGTCACCCATTTATCAAAATTGTCTT AGTGTTAACAAGACGTACTTCAAACAGTGTAGAAAACGTATAGCTAATGA TGAGTTGACGATATGAAATAAGGTCGATCCATGTGATATAGGGTGGATCA AACCATGAGAGAAGCAAAGATTGTCAAGAGTATCGAAGGAGGAATTGGAA ATACACAATGAGAGAAATCCTATTCATAAAAATTTTGTCTCGACCATACA AAAGTCTATAGAATTCGAGACAAAGAGTCAGTCAGAAGGAGGAAAATAGA AAGAGGCAAATATTTCGGAGACAAGTCAAAAGTATTTCCGATGCGAACGA GTGAAGTAAAAACGACAAGTATACCTTTTTATAATTACGTAAACAAAAAG CAACAACAAAAACAAAACGAGAAAGAAATGTTTGTTTGTTATATAAATAA TACGAACAATTACTGACAAAGGAGCCACACAAATAAGAGAATTTTGGAAG CTGAATATTTCTTCCACACAAAAAAAGAGGACACCGTATAAAGGATAGTA AGAAACGTGATCCGGTAACTGTTATCTCTTTCACTTGTATATGGTTGTTT GTATTATTGATGACATTCATTTCTTTCACACACAACAACTTGGATGTTGT TACAAATAAAATATCATCGTTTAAAAAAAAGGGGTAGAGAAATTTTGTAT GAGTGTTTATAATTAGTTGATGTTTATGTTGTTTTTCATATGTATGTGTT CTGTTGTTTGTTATAGCAGTAAAATGCTCGTTTGTGTGAGATTGATTTTT AGGTATGCTTTATGCAATTATCAAAACGAAGTAACAAAACGTGTCCCCGA AGGGGCTAAAGATGAAACTCTTAGATGGAAAATGAGGCAATTCGAAACAT GTGGCCCGCGTGGTTTTCTTTTTACCAACTGAAAAAGTACCATGTCTACC ATTATGGATTTGAGAGTGTTCCCATCTTCCTGGGTGTGGGGCTTTGTTTT GGTGATTCCTGACATGTTCCTGGACCTCTGTGCAAAATTTCATCTCTACA CCATTTTTGTCCCGGTTTTGGCGGTTTATGACCTAATTCTACCTGAATAC TACCTCCTTACAACATTAACGATGTTGAGCAAGACATTGTTTAGATGTTG TGTGCCGGTTTCTTTGAAAGTTTTTCGTATGAAAACGAGTAGTTTCTGGA TATATTTCCAGGTATTTATTCACTTTAAACAAACTAGAAAACAAAATTGG TAATAATCTAAGAGAGGCTTTCAAATGAAAATTTCTCTATATATTTTCAG GTAGTAATTCAACATTATAAACAAACAAGAGGAAAACAAATAAACAAATA TAATATTCAATGAAGAAGAATGGTACAAGACAACATTATCAATCTCATCA AAACAACACTACATCCAATCCCTATTGTCTTTGGTGAGAAATACAACAAA ACAGATAGTAGTAGTGGATTGAATAACAATCGTTTACTTGTTCCAACATC AGGTATCACCAATGTCAGCTCAAATAATTATCCAGAAATACCTCTGGGTA CAGAGATTGGTATTTCCACAGCTGTCTTCGCCGGCCTTGGTATTCTCATT AATGCTTTGGTAATAACGGTTATAGTCATGGCCAAAACAAGACAATATTC TACATATAAACATCTAATGCTACATTTGGCAGCCTGTGATTTTCTATGTT CAATTATGTTATTGCCTTACGTGCCGTTAGAATTGAAAAGTCATTATTGG ACCTATCCAGATGCAACATGTCAAATCATCTATCCAACAATATCTCTCCT GACCAATGTTTCGACAGGGACGATTTTGATTATAACCATTGAACGATTCA GAGGCGTTTGGTTCCCACACGCCCGTCAATGGGGCGGAACAGACGTAAAG AAAGCATTCGCCATTGTCTGGCTCATAAGTCTTGTATCCGTACTACCCAA TATCATCATGTTACGTGTGAAACAATATGACAATATAATATATTGTAATG AGGTTTGGGATGAAAACGATCCCACTTATAAGCGTTTGTATGGATTCTCA TTTTTGGCTGTTTCTTTTTTCATTCCATTACTGGGAATTACTATCATGCA CACCTTGATTATCTGTCGATTGAAATATAAAGAACTCACACCGGACAACA TGTCAGCTCACCAGCAACGACAGAACCAACGCATTATGAGAGTTCTAACT GGTATTATAGCAGTCTTCTTCTGCACTGTCAGCCCAAACAAGATATTGTA TTTCGTCTGGGATGTGGACCCCCAGTTGGAAAAGGACTTGGAATCAAATA CACGATATTATTTAAGGACAGTACAGTTTTTCTACTGGTCTCGAGTAGCT ATCAACCCTATGATTTATTGCTTCTTTGATACACGTTTCAAGAAAGATTT CAAAAAGTCCACTAGAAGGATGCGTGGCTTGAGTATAAGAGACAGTGAAG TTCGAAGCCGATCGGCTAGCCAACGCACTTCCACAATACTCTCCGTACGA TCAAGAGCGAACAGTAGCTTTATAGGCGAGGCGGAAGAAGCTATCTCTCG ATGTAACCGTATGAGTAAGATCTCCGAAATGGATGCAACGTCTTTGCAAA CGTTCGTTGAAGACAGGGGACGTCGCGTACGTTCAGCCACGGTAGATACG GACCTAAGTGTCTCACCAATGGCCCACAGCACATTGGTAAAACAAGGATC TAGATAAATCGAAATTTATTATTGTATATGAGGTTCTCGTTTTATAAGAA CTTTAATATTTGTTAGGTGTATTATAAAATGCCGTACTTAGGTTAACAAC TCCTTCCGCCCTGTTCGAGTCTGACCAAGATTGGGGTATAATAGGGGAGT GGCAAAATTTCGTCGAAAAGTGCTTAAGCTGAAAGTTTACGCCTCACGTT TTTTATTACTTCACTCACTATAAAAAGGAGACATTTGGCTTCCACTTTTT TACAACTTGATGGCTTTTAAGTACGTTTTTTCCTCTTTTTGAACATTTAT ATTGCCAACTTCAACGACTTCAATTTAATTGACTCGATGAAACATGTTTT AGCGATAATTGCTCCGACTGTCATGTAGTTTCCAATCCTTGTTTTAAATG TATATTTTTCGGAAAGCAACAGAATCTAACGTTATACAGTTAACATTAGA TTATACTTGTTGAAAAATGAAAAATTTGCAAGTAACAATAGCTAATCAGA TACAGATATGATATCTGTGGCCAAACCAAAGACCTAAATACTTGTACTGA TCGAATAAAATTCATGATGAAGCTTATTATCATATTATGTTATAAAGATT GTATCTAATATACATCATATCATTTTTCTTGCATTTATATAGAAACAAGT ATTATTACAAATATATATTGTATAAAATATTATAATAATGATTATTTTTA ATAGGTATTCTTTCATATGTATGATAGTCCCCTCCTTGTAAAATTCTTGT AGCTTATTATACTCATTATATTTTTAAAAAGTCATATACATTATAGTATC AAAAAGAGAAAACTAAAGTTATACTCACAAAAACA

Coding sequence (CDS) from alignment at scaffold_243:594803..603137-

>TCONS_00054653 ID=TCONS_00054653|Name=TCONS_00054653|organism=Clytia hemisphaerica|type=CDS|length=1338bp|location=Sequence derived from alignment at scaffold_243:594803..603137- (Clytia hemisphaerica)
ATGGTACAAGACAACATTATCAATCTCATCAAAACAACACTACATCCAAT
CCCTATTGTCTTTGGTGAGAAATACAACAAAACAGATAGTAGTAGTGGAT
TGAATAACAATCGTTTACTTGTTCCAACATCAGGTATCACCAATGTCAGC
TCAAATAATTATCCAGAAATACCTCTGGGTACAGAGATTGGTATTTCCAC
AGCTGTCTTCGCCGGCCTTGGTATTCTCATTAATGCTTTGGTAATAACGG
TTATAGTCATGGCCAAAACAAGACAATATTCTACATATAAACATCTAATG
CTACATTTGGCAGCCTGTGATTTTCTATGTTCAATTATGTTATTGCCTTA
CGTGCCGTTAGAATTGAAAAGTCATTATTGGACCTATCCAGATGCAACAT
GTCAAATCATCTATCCAACAATATCTCTCCTGACCAATGTTTCGACAGGG
ACGATTTTGATTATAACCATTGAACGATTCAGAGGCGTTTGGTTCCCACA
CGCCCGTCAATGGGGCGGAACAGACGTAAAGAAAGCATTCGCCATTGTCT
GGCTCATAAGTCTTGTATCCGTACTACCCAATATCATCATGTTACGTGTG
AAACAATATGACAATATAATATATTGTAATGAGGTTTGGGATGAAAACGA
TCCCACTTATAAGCGTTTGTATGGATTCTCATTTTTGGCTGTTTCTTTTT
TCATTCCATTACTGGGAATTACTATCATGCACACCTTGATTATCTGTCGA
TTGAAATATAAAGAACTCACACCGGACAACATGTCAGCTCACCAGCAACG
ACAGAACCAACGCATTATGAGAGTTCTAACTGGTATTATAGCAGTCTTCT
TCTGCACTGTCAGCCCAAACAAGATATTGTATTTCGTCTGGGATGTGGAC
CCCCAGTTGGAAAAGGACTTGGAATCAAATACACGATATTATTTAAGGAC
AGTACAGTTTTTCTACTGGTCTCGAGTAGCTATCAACCCTATGATTTATT
GCTTCTTTGATACACGTTTCAAGAAAGATTTCAAAAAGTCCACTAGAAGG
ATGCGTGGCTTGAGTATAAGAGACAGTGAAGTTCGAAGCCGATCGGCTAG
CCAACGCACTTCCACAATACTCTCCGTACGATCAAGAGCGAACAGTAGCT
TTATAGGCGAGGCGGAAGAAGCTATCTCTCGATGTAACCGTATGAGTAAG
ATCTCCGAAATGGATGCAACGTCTTTGCAAACGTTCGTTGAAGACAGGGG
ACGTCGCGTACGTTCAGCCACGGTAGATACGGACCTAAGTGTCTCACCAA
TGGCCCACAGCACATTGGTAAAACAAGGATCTAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034425XLOC_034425Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054653-proteinTCONS_00054653-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054653-exon-scaffold_243-1575043694:603079..603137TCONS_00054653-exon-scaffold_243-1575043694:603079..603137Clytia hemisphaericaexon
TCONS_00054653-exon-scaffold_243-1575043694:594803..597037TCONS_00054653-exon-scaffold_243-1575043694:594803..597037Clytia hemisphaericaexon
TCONS_00054653-exon-scaffold_243-1510915933:603079..603137TCONS_00054653-exon-scaffold_243-1510915933:603079..603137Clytia hemisphaericaexon
TCONS_00054653-exon-scaffold_243-1510915933:594803..597037TCONS_00054653-exon-scaffold_243-1510915933:594803..597037Clytia hemisphaericaexon
TCONS_00054653-exon-scaffold_243-1491911889:603079..603137TCONS_00054653-exon-scaffold_243-1491911889:603079..603137Clytia hemisphaericaexon
TCONS_00054653-exon-scaffold_243-1491911889:594803..597037TCONS_00054653-exon-scaffold_243-1491911889:594803..597037Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:594803..603137 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 8.92024 6.34063 2.0092 2.20565 1.24373 5.66156 1.63727 1.79162 26.8466 26.3028 26.1186 24.5015 11.1961 38.4542 10.6163 12.8747 8.34079 9.63466 4.50219 5.05281 19.1521 11.9365 5.16749 5.1169 18.7096 14.8002
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054653 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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