TCONS_00054257 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054257
Unique NameTCONS_00054257
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054257 ID=TCONS_00054257|Name=TCONS_00054257|organism=Clytia hemisphaerica|type=transcript|length=2246bp
ATCAAAGCACACGTGCCCCATTATAAAATGAGATCTTCTTTGTAGAGAAA
TAGATTTTTCGACTTTGTTTCTTATTCTCGAGTTACTATTTGGTTATATG
GTGATTCAAGGAGGTTAAGATAAGAAGAAGAAAGCAAGAAATTGAACAAT
AACACACTATGGCATCATCAAATCGTTCCAGCATGTCATCTATTACGAAA
TTGCATGAAGATGAAGATCTCGATCTTTTAGATCTTCTAGAAAAAAACGG
TATCCTTCTACAATGTGAAGTCAACCCTCAAAATACGAGATTTTCCGACA
AATCAACATCCTGTTCAACTCGATCGTCGTATGCAACTATTTCACCGACT
CCCGACGACAATTATTACGAGTGTTTTGATTATACGGACGAAGAGAAAAA
ACGACCGGACTCGGATGAAGAATCAGTCGGAACAGACGATGATTTGGTTA
CTATTCATCACGACGAACGAACGCGTGTTGAGAGAGAAGAAGTGAAGCAA
AACATCTGCCACAATGTGAAAGCAAAAGAAAATGAAAATGATTCAAACAT
ACAACAAAGGTTTATTGAAACGAATGGAATAGAAGAGAGAAGAAGAAATT
TATTCTGCTTTTGTTCAACAACGTGTCTCGTAAAATACCTAGGTGTTTTG
TTATTCTTAGTTGGTGTTCTCTACGCGTTCAGTATTTGGAGTTTTCTTCA
ACTGGCTCCTGCTTCGACCTTCAATTATGTTCAAGGACCTCTTCCAATCT
GTTTACCATGTACGACGATGATATTTACTGGTCTGATTGCCTTAGTAACA
GATCTTTTACATAAGCACCTACCCAATAGAAGATATATTTTACTTgtttt
gtttgttttggtgttaTCAGTAGCATGTACATTATTCTGTGGCTTCAGTC
TTATCTATCTCATTGGTGTTATTCAAGATTCACTTCATCAGCTCAATGGA
TGCAGCTTTGACGAACTTGATCGTATTTGCTCCTGTTATGGTCCTAATCA
CAAGATCTTCAAATTTGCTGAAAACTTAGGTTGCAATGCTGTTAAAGACA
AACTGAAGGAGCTAGCTTATGGTGTCAGCATCTTGTTTGGTGTCGGATGT
TTAATCTCCCTGGCAACAGCGACGGCTGCCGGTTTTTTGTTATGTCGCGA
ACGACGTAATCGAAATCACCGAGTGGAATACACGAGATCAAGACTCGAGC
GTGGATCGACAACCGTTCAAAATGAATCAGCCGTCAAACACGACAATAAA
ACACGACACAAGAATGACGTTCACGAAGAAAATGACGACGACAATGATAT
CTCTGAAACACATAGACTAGCTGCTCATCACCTCAGACAGGAGAGAACTG
AGACTAGTCAACCAGCTAACACTTCTCAACGTACAAAACTTTATCACGCA
AAGCGAGATTCTAAAAGGCATAAGAATAGACACAGCCACAAAACACAACA
ACTACTTAAACAAAGGGATCCATCTAAAAATACAAAGATTACGTCAGTTG
CTACCCAGACCCCTAATTACATGATACCAGTCTCCTCTTTAATGTATGAC
GTCATCGATCCGAACACAGAGCATCACCATGGGAACGAAAGTGAAGATAC
ATACAGTGAACTTAGCATAGATGCCACCCTCAGTCCGCCCTCTTATACAG
AGGCGGTCaaggttcttaaaaaagatAAATATTGAAGATGGGATCGCTTT
ATGGACGAGAATGACGTAAaccaaaatgttttaaactaGATGCAACATTG
GTCCAATtcataaaagaaagttttgggCCCAAAAGAAGGCGtttattttt
tcctcttttttgtaCATAGACCTTTCATGTATATAAAATGCCAGAGAGAT
TGTGAGACTGAGAGTGAAAGGAGGGGAGAGGGTCTTATAAATAAAAGCAA
AAGAATATATTTAGTATTTTTACCGTAAAACAATGACTTACTTGTTATAA
TATTCCTATTAAGGTAAATGCACTGTACACTCTACCTTAACTTAAGGTAA
CTAAGTCTCGCTCACCAAAGtatttttcctaattttccaaaataaaccCT
AATCTATTTggtaaaaaagaacaatttgacCTGCTGCCATTCGCCAAATT
AGTTCTCGCTAAAAAAATTCCCGTTCAAAATGCTGCTCGCTGTTCTGTTT
TCTTGTGTGTGCACTTGACATCGATATTTCTATGACAAATTGGATTATta
acattgggcttttccagaaaaaaaattgaatatgggggggatATAA
Run BLAST on NCBI

transcript from alignment at scaffold_242:1284379..1294099+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054257 ID=TCONS_00054257|Name=TCONS_00054257|organism=Clytia hemisphaerica|type=transcript|length=9721bp|location=Sequence derived from alignment at scaffold_242:1284379..1294099+ (Clytia hemisphaerica)
ATCAAAGCACACGTGCCCCATTATAAAATGAGATCTTCTTTGTAGAGAAA
TAGATTTTTCGACTTTGTTTCTTATTCTCGAGTTACTATTTGGTTATATG
GTGATTCAAGGAGGTTAAGATAAGGTAAGGCATGGTATTTGGTGTACAGT
TGTATGTAGTTTGTCAGCTTTTGGGAAGTTACATTAAACGAGGCTTGTAT
ATACTGTAGTGCTCGTTTTTATTCTGTCGGTAACTCTTTGGTTTGGCTTC
TCTCTGAGCTTTGTTTAATTAATAATGTTGATTTTGTCAAATCTAAAATG
TAATTTGGTTTTGAGAATACTAAGCGTCCTAAGAATTTCGCTtgaatttt
ggcttaaaaaCCATGGTGTAGTTTTTCTTCAGCAGTATACTAATAATTTA
GAATGaggtgaaaattttcaatatctttagaaaatatcaaaatttccatt
catggttttatcattaaaaaatttattgAGCCATAATCCTTTTTACCATA
TATGTTTTTACCAAAAGagagaactttttaatcaaattcctATGTTCTTT
ATATTATACTTAAGGGGAATTGTTTCTGCTAAGATTTTCCATTTAgatta
ttttaaaagaaattttaatgcTTAGATTTCATAAACGTACCTATTGAAAT
TTAGGAAAGCTTTCTCATATCAGCTGCTTTGGTACTCAAAGATTTTGGTG
GAtatgaattttttgaatttttagaatttttaacaaTCTTGAATTTGTTG
TATTTTACTTGTTTTTAGCATTCCTTTTTTTGTGGGCTAAGGTTTTTATC
TTTCAGGGCAGTATCTTGATTTATCAGTTTAGTGTAATGTAATGGCTTTT
CAAATGATATGCGTACTGTATGTTTCGAAATCATTgtacagaaaaaaata
ttttgtgctTAAAGGAGTTCgctttaaaatatttgtaacATATTTGTTAA
TTGTTCGGTAATTGGCATGCCCTACTGCTGTTTTGTAGAAACCAAAGGGG
GTTTATTGAAGAGCGTGCATCGGCTTGTTCATCTTTcactttacacgttt
tttttataagaacatccaaaatttttggagccttcggatgttcgtaactt
tttgaattataagcctaaaaaattatgttcttaacatgttcttattttca
ccattttttgagcatttttgcctatttttctaagaaacaggctgttttag
agtccgcgaagccttgaaatgttcttaacttgttcttagtattttgacca
tcgaactcttatattcttatatagtttgttcttataaagaaacgtgtATA
TCATTGTAGGCTAAGCCATATATACTGTAGACTAGTTTATTGGAGCAGAG
AAATgtgtagtctacacaatagacagctccaggcttttaggccttactct
tggtctatagagtaggagttttacgctcgaaacgaaggaagatatgacgt
agcctaagaAGTGTTTTTATTAAGGTTGTTATTGAATTCTTTTTATGGTA
ATTTTTAAAGGGGCCTTTCAACTTTAAAGTAAACACTTTTATTGATATTG
ATATTTTATACAGATATTGCAtcaaattgactttttctaaatttataaGA
TTTCAATTTGTTTAAATAAGTTTTTAAAGATTAAGACTTAGAAAGGTTTA
CGGGGTCGGTTTTATGTGTATGTCTGACTTCCTTATTAACACTCATTTGA
GGTAATGTTCTCGTTTCTTGTTTCTGTTTTGAATGCacagtttttctttt
ataagaatatactttataagaatattaatgatgaaattggctgaaaaatt
aagaatatgctatcATTGAgtttgcccggggggggggggcctgggtttgc
ggactgacggtatgtgcgggctaaAAATTTNATCCCAAACTGAGGCTGAG
catgttcttacaatgttcttaatttttcgacgaatttcagcctcaatgtt
cttatagactaggttctaataaagaaaaaaacgtgtaattttattaaaaa
agcaTGTATTTCCTTGTGACAACATAGttcagaagctggagctcaactac
tttttgcctttaataTTTCTGATGGGGGGAAAAGTAAAGACTCCTATAGt
agcgccatcattcaaatcagaaagcaaagATAGTATACAGCAGATTTTCT
GACTAGTGAAAAGGACAAAATACATAGATTTACTCTAATCTGGGGATAGT
ATCTTTGTTTTGTTACCTCTTAATGGATTGTATTTCATTTCAGAAGAAGA
AAGCAAGAAATTGAACAATAACACACTATGGCATCATCAAATCGTTCCAG
CATGTCATCTATTACGAAATTGCATGAAGATGAAGATCTCGATCTTTTAG
ATCTTCTAGAAAAAAACGGTATCCTTCTACAATGTGAAGTCAACCCTCAA
AATACGAGATTTTCCGACAAATCAACATCCTGTTCAACTCGATCGTCGTA
TGCAACTATTTCACCGACTCCCGACGACAATTATTACGAGTGTTTTGATT
ATACGGACGAAGAGAAAAAACGACCGGACTCGGATGAAGAATCNgtgaaa
atcataccctgcattttcccccaaattttcaatccttttcgtgcaaaaaa
atggtcaaaatagcatttttggtcaaaaaatctagatttttcatgaattt
tctgaaatttctacccttacagtgcatctttTCTTTTTCCGACCCTTGCA
GTCtgttacagtgcattttaaacatcttggaaaaggtacccttagggccC
ACACATAATCGGTcattttgcccagctgccccccccccccccggcgNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNcccccccccccccggagcaGAACCCAAGAAT
GCCAATTTTAGAgccttttttaactttaaattgccaattatcccCAAAGT
AAGGCTCAAAACTTCCACTGCCATTTTTACGAGTTTTAGGTATGTATTGC
ATGTTAAACATTGAGGTTGAATTGGGATCTAAACccaagaataccgtaag
aatagtttaggatgattttttcccaaaaagttaagaatatccatgatgaa
atggaaaatcactacacgttttttttttattagaacacctaaaattcggc
tgagcctggatgtgcttatttttttagaaattttcagcctaatgttctta
aatgcgtttaaatttttcagactactctaaatcaaCAATatcatacaaaa
taaagagcacttaaaattggtaaaatttggacaatatttgattctcgatt
ttagaaaatccatccctaagtttggttaaaattgcttgaaaagaggaaaa
aattgtagtttCTTGTCATTTTATCCCAAACTGAGGCTGAGCATGTTCTT
ACAATGTTCTTAATTTTTCGACGAATTTCAGCCTCAATGTTCTTATAGAC
TAGGTTCTAATAAAGAAAAAAACGTGTAATTTTATTAAAAAAGCATGTAT
TTCCTTGTGACAACATAGTTCAGAAGCTGGAGCTCAACTACTTTTTGCCT
TTAATATTTCTGATGGGGGGAAAAGTAAAGACTCCTATAGTAGCGCCATC
ATTCAAATCAGAAAGCAAAGATAGTATACAGCAGATTTTCTGACTAGTGA
AAAGGACAAAATACATAGATTTACTCTAATCTGGGGATAGTATCTTTGTT
TTGTTACCTCTTAATGGATTGTATTTCATTTCAGAAGAAGAAAGCAAGAA
ATTGAACAATAACACACTATGGCATCATCAAATCGTTCCAGCATGTCATC
TATTACGAAATTGCATGAAGATGAAGATCTCGATCTTTTAGATCTTCTAG
AAAAAAACGGTATCCTTCTACAATGTGAAGTCAACCCTCAAAATACGAGA
TTTTCCGACAAATCAACATCCTGTTCAACTCGATCGTCGTATGCAACTAT
TTCACCGACTCCCGACGACAATTATTACGAGTGTTTTGATTATACGGACG
AAGAGAAAAAACGACCGGACTCGGATGAAGAATCAGTCGGAACAGACGAT
GATTTGGTTACTATTCATCACGACGAACGAACGCGTGTTGAGAGAGAAGA
AGTGAAGCAAAACATCTGCCACAATGTGAAAGCAAAAGAAAATGAAAATG
ATTCAAACATACAACAAAGGTTTATTGAAACGAATGGAATAGAAGAGAGA
AGAAGAAATTTATTCTGCTTTTGTTCAACAACGTGTCTCGTAAAATACCT
AGGTGTTTTGTTATTCTTAGTTGGTGTTCTCTACGCGTTCAGTATTTGGA
GTTTTCTTCAACTGGCTCCTGCTTCGACCTTCAATTATGTTCAAGGACCT
CTTCCAATCTGTTTACCATGTACGACGGTAGGTAGtctgttttttcttta
ttcttatGATTATTCTATTGTCTGTATTTTTATCGACTTGTACGCATGCG
TTGTTCTATTATAATATGATTTTCATATTACGAAAGTCATTCTATATTAT
AACATTACTAGTCCCTTATATGAGTTGTCATTGAATTCAAGAACTTCCAT
CTTTAGGATTTTTCGTTTCTGAAGTCTCCTTACACCCCAGACTTATTTAG
CTGTACTGTATTCATTTCTCGTCAGTATTATCAGATAATCGTTTACTTTA
AAAGAGGGTGTGTACCTAAGTTCGTTTTTTTCGTTAgatactttttaaaa
aagttcaaatttgaGTTCGGAATTAGGAATAAGCATTTTTTGTTGAACCC
ATTTTTTCGATCAACAAAATTAGAGGTGAAGTTTTCCTTTCCTATTTATA
GAAGGGTTTACACACAACAGCGGTTCAATCCTTATGCTTTTTGCTACCTC
TCTCGCTTCCAAGGGCTTCCGCcttataaaaaatttcaacatttccataa
gaaaaagaagtatgaaaagcagaaaattttataaaacaaaaaagaaaatg
atatcTACTAATTCTTTTTCGCACTGTTTTTTTACTTCATaagttttaat
ttcttttcttcttcaatcttttcttcttctccctctttctctctctctat
GTTTATATGCTTCAGTTGATATTACCTTATGaacttcttttcttttgttc
cgGTTAATTTGTTATGGTGACTCAGCACCCTGAGATGTAATAAGTGACTC
ActctaaaaaatctctccacATCATTATTACTGACTTTTTTCAAAGTCTT
AAAAAAGATTCTTGGCCCaattaatcaaaatttatcTCTTCTCTTTCCTC
TTCTTCTTCGATTACATAGATTTATTGATTTTCCAGAACTTCTCGTTTTG
ATAATTCACATTGGCATTGCTCATCCTATACATGCATcaataaacaaaat
attaagaacattttaagaacattttgaggctttgcgaactctaaaacacc
cgatttttttggaaaatgaaagaaaatactcacaaaatggagaaaatata
aaaacaaaaaatatttttaggcttaaactcaaaaagttaaaaacatccga
aagctattaaaattttggatgctcttataaaaaagggtgtACTGGGTCCA
TACATCACATCGTCGTACACATGACTAAAAATAAGTGTcttagaaaattg
aaaatcttgcAATTCTGTTCTGCCTTTGAGATTGGTCTTTTTTGCCATAT
GAAAACATTGATTATTCCTCTACATGAAAAAAAGGGCAATgtcaatctca
aagatgaccaccacagtaaaactttaaattttgtaaggtactaattttga
gatttaaccTTTTTAGTCATGTGAACGACTACATAGATATTTAGATTACT
GGAACTATTTGTGTTTCATTGACGTCTGTCTCCACACTTTTATAACAAGC
AATGTTATGAGgctaaaaaatggcaaaaatttaagaagaaaCAAACATTA
GTAGGGAATGACTAAATATGAAGCAGTTTGAGGGTAAAAAGCCTATAATG
CTATAAGAACAGGGTAAGAACAATGAGACTCGACAAAAATTAAATGGTTC
gttaaaaaaagtgtttaaaatgGAATTCCCCTTAGTTTTCTTCCTCACTc
caagaaaataacaaaaagataCAAACCGAATTTAGGTAAAGGTTTTGTGT
CATGGAATCGCCAAGTAATCAATGCAGTACCTAAACCAATTGTCTTCTTT
TCATAGTCTCTTTCATGCCTTTCGATCACTACAATTGGGGGTATCAGGAT
AAAGTGTTAcgcctggggggggggggactaacACAAAAATgagtgctggg
tatgtgcagacTGTAAGAGTTGGTTTTTTCACCCTTCAAAGCATCTCTAA
GGTTCgggaaaatcagaaagttttaaattagtctctctaaaaGTCGgaat
ttaggattttttttttatttcaagtgaaaaaattgtaaaaaagtctcgcT
AAGGTtaccacttttttcaaaaatcgaagaaaatctttcaaaaaagtctc
tctaggGATCGGTTTTCGGACGTctcgtccgcacatacccctcatccgcc
aaccctagtatcCCCGGGGTGTTATGTTATTCAGGACGAGCGCCCTACAA
ATTTCAACAATTTCCTAATGGCATTATTTCTCATTCTTTAAAAGTTTGGT
TACTTATTAAATGTTGATTGATGAATAGCAATTAAGAATTTCCTTGGTAA
CTAAAATTTGAGCGAGAATTTGTTATACCTTATCCGCCCATTTTTCGTAT
ACCCAACCAAGCGGGAAGTCATTAAACCTCGTTCAATTTCGCTGAATCGT
GTTTACCCCCCACTTTTGTGTTTACCGCCCATTTTTGTGTTTACTGCCCA
TTTTTCTAGTCTATGAAAACAATAGCTAGGTTAGATTCAATCTATGGGAA
AGAAATCCTTTATAGGTTCAGAATTTGGCTTTCAATATAAGGTTGCAGTC
GAATACCTTAGCCTTTCaggtatataagaacataaggtttcgaaggccaa
aatgttaagaacaagatgagaacattttaaggctttatggactcaaaaac
actcgattggttaagaacatttttaggctcgaaactcaaaaagttaaaac
atccgaaggcttcaaaaattttggatgttcttataaaaaaacgtttacat
CATTGCAAATACTTAACTGGTTAATAATTCCTTTCTTATCTTTCGATATT
TCAGATGATATTTACTGGTCTGATTGCCTTAGTAACAGATCTTTTACATA
AGCACCTACCCAATAGAAGATATATTTTACTTGTAAGTATTTTCTTTTAC
CCCCCCCTACAGTTTACTGCAAAGCAATCGATAATacaataaatcaaaag
aaaacaaaatcatgaaaaaccaaagaatttgaaatatttagcacacaatt
ttagatttttatccctcttgtaataaaataattatcgttggaaagatatt
tagtAAGTCCTAAGTTTTTAATACCTTTGATGCTTTTTTGATATTTCCTT
AGCATCTTCTCTTTTATATCTGTCCATTGATATACGAATTCCATTGTTGC
TGATAtggattttttatcaatttctttcttcaggttttgtttgttttggt
gttaTCAGTAGCATGTACATTATTCTGTGGCTTCAGTCTTATCTATCTCA
TTGGTGTTATTCAAGATTCACTTCATCAGCTCAATGGATGCAGCTTTGAC
GAACTTGATCGTATTTGCTCCTGTTATGGTCCTAATCACAAGATCTTCAA
ATTTGCTGAAAACTTAGGTTGCAATGCTGTTAAAGACAAACTGAAGGAGC
TAGCTTATGGTGTCAGCATCTTGTTTGGTGTCGGATGTTTAATCTCCCTG
GCAACAGCGACGGCTGCCGGTTTTTTGTTATGTCGCGAACGACGTAATCG
AAATCACCGAGTGGTAAGTTTCTTTGTTGTTTAAGTTTTTTTATCCCTTC
ATGACGTTCATGGTACCCAAGGTCAATTGTGGTGTGTACATAGTTTCGCA
GTTGATGGAAATTTTTTCAcatgaatttaattttgcattaGTAAAACAAG
AATTATTCAGTATTTGACCTAAAAATGCTgattttgtgttttccaaaGTC
AAGATAGATGACAAGTTGAAATCTCCTAAATGGGTTCTTACACgtcaaaa
ttctattgttttgcGGCTTAAAAAGTGCAAATTGAATATTTAGCTTTGGA
AAAGAGTTAAACAGAAATATTTAGAGCCATAGAGGTTTTGTCCAGTTTCG
TGGAAGGCATCTAGATGCACCAGATAAACCCTGATCGCTCCTTTAGAAGT
CTTTTGCTTCATCTATACTGGTTAAAAGAATTACTTTGCGACCCGACATT
GACTAGGAGCTGTTTAGAATAAGAAAGTTTACTCCCTATTGCGCCTTCTC
TTATTAAATACTTGTGGATCCCTAAAAAAGTCTCTAGGTATCCCCGAAAT
GGAATCAGAATCCCCAAGATGTTGTATTTCTGAAAGAGAATTCTGAATTT
ACCATAaactctttctaattcgaagtTCCATTTATTCTAATCATGCGAGT
TGTTATCCTTTTGGATCCCTTAGCTTAGAATTAGAAATTGCTTACTAAAG
ATTCACTCTTTAATTTTAACCCTACTCTATATCGAACACAACTTATTGTC
TTGAAGAGGGAACTTGTAAGAAATTTTATCCTCCTCTTCTCTTACTATAG
GAATACACGAGATCAAGACTCGAGCGTGGATCGACAACCGTTCAAAATGA
ATCAGCCGTCAAACACGACAATAAAACACGACACAAGAATGACGTTCACG
AAGAAAATGACGACGACAATGATATCTCTGAAACACATAGACTAGCTGCT
CATCACCTCAGACAGGAGAGAACTGAGACTAGTCAACCAGCTAACACTTC
TCAACGTACAAAACTTTATCACGCAAAGCGAGATTCTAAAAGGCATAAGA
ATAGACACAGCCACAAAACACAACAACTACTTAAACAAAGGGATCCATCT
AAAAATACAAAGATTACGTCAGTTGCTACCCAGACCCCTAATTACATGAT
ACCAGTCTCCTCTTTAATGTATGACGTCATCGATCCGAACACAGAGCATC
ACCATGGGAACGAAAGTGAAGATACATACAGTGAACTTAGCATAGATGCC
ACCCTCAGTCCGCCCTCTTATACAGAGGCGGTCaaggttcttaaaaaaga
tAAATATTGAAGATGGGATCGCTTTATGGACGAGAATGACGTAAaccaaa
atgttttaaactaGATGCAACATTGGTCCAATtcataaaagaaagttttg
ggCCCAAAAGAAGGCGtttattttttcctcttttttgtaCATAGACCTTT
CATGTATATAAAATGCCAGAGAGATTGTGAGACTGAGAGTGAAAGGAGGG
GAGAGGGTCTTATAAATAAAAGCAAAAGAATATATTTAGTATTTTTACCG
TAAAACAATGACTTACTTGTTATAATATTCCTATTAAGGTAAATGCACTG
TACACTCTACCTTAACTTAAGGTAACTAAGTCTCGCTCACCAAAGtattt
ttcctaattttccaaaataaaccCTAATCTATTTggtaaaaaagaacaat
ttgacCTGCTGCCATTCGCCAAATTAGTTCTCGCTAAAAAAATTCCCGTT
CAAAATGCTGCTCGCTGTTCTGTTTTCTTGTGTGTGCACTTGACATCGAT
ATTTCTATGACAAATTGGATTATtaacattgggcttttccagaaaaaaaa
ttgaatatgggggggatATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034225XLOC_034225Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054257-exon-scaffold_242-1491911889:1284379..1284502TCONS_00054257-exon-scaffold_242-1491911889:1284379..1284502Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1510915933:1284379..1284502TCONS_00054257-exon-scaffold_242-1510915933:1284379..1284502Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1575043694:1284379..1284502TCONS_00054257-exon-scaffold_242-1575043694:1284379..1284502Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1491911889:1288113..1288755TCONS_00054257-exon-scaffold_242-1491911889:1288113..1288755Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1510915933:1288113..1288755TCONS_00054257-exon-scaffold_242-1510915933:1288113..1288755Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1575043694:1288113..1288755TCONS_00054257-exon-scaffold_242-1575043694:1288113..1288755Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1491911889:1291533..1291610TCONS_00054257-exon-scaffold_242-1491911889:1291533..1291610Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1510915933:1291533..1291610TCONS_00054257-exon-scaffold_242-1510915933:1291533..1291610Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1575043694:1291533..1291610TCONS_00054257-exon-scaffold_242-1575043694:1291533..1291610Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1491911889:1291912..1292241TCONS_00054257-exon-scaffold_242-1491911889:1291912..1292241Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1510915933:1291912..1292241TCONS_00054257-exon-scaffold_242-1510915933:1291912..1292241Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1575043694:1291912..1292241TCONS_00054257-exon-scaffold_242-1575043694:1291912..1292241Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1491911889:1293029..1294099TCONS_00054257-exon-scaffold_242-1491911889:1293029..1294099Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1510915933:1293029..1294099TCONS_00054257-exon-scaffold_242-1510915933:1293029..1294099Clytia hemisphaericaexon
TCONS_00054257-exon-scaffold_242-1575043694:1293029..1294099TCONS_00054257-exon-scaffold_242-1575043694:1293029..1294099Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1284379..1294099 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0199201	0	23.1796	24.0902	1.36527	2.57694	0	0.368189	0	0.270018	0.800456	1.34374	0.904836	2.31518	1.57268	0.928049	0.851505	0.468172	1.49653	0.543671	0	0.576362	0	0	0.589371	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054257 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top