TCONS_00054165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054165
Unique NameTCONS_00054165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2698

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054165 ID=TCONS_00054165|Name=TCONS_00054165|organism=Clytia hemisphaerica|type=transcript|length=2698bp
CGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGT
TTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATC
CATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTT
GGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaag
aaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAA
ATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTC
ATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAG
TCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGAC
AGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGC
AAATGGAAAAGCTAATGGGAAGAAAGCACCAGCTAAGAAAGAATCAAGCT
CGGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCA
AAAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGA
CAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAG
CTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGT
GATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGCCCCAGCTAAGAAAGT
AGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGG
AAGAAAAACCTAAAGCTAAAGCAAAAGCTCCTGCCAAAAAGAAAGCTGAT
TCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAA
AAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAG
AAGAGGAACAGCCCAAAAAACaaaaagaagaaaagaaaaatttgaaacgt
AAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGC
AACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGATGGAC
TTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCCGTATT
ATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCTGATTT
TGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACACTACTT
TAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACG
CCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTC
AGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATA
ACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATGACACT
TATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGT
TGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACG
ATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGAT
GTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAAGATTT
CAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTG
GCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGT
GGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAA
AGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAATGATT
CAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTATTAACG
TATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCA
GGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTCCTCTG
TAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGAACGTT
GCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTTGAAGG
TGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAACTTGCC
GAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaatctaG
CTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATTGACAT
TGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttttattt
catcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATAACAAt
acattatttttttgtatttttttcatggTTTTCAATTGGCTTGGAAactt
ttataaacaaaacttttacAGGACATAATACTTTAttatacatttttaat
ttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTGGTAAA
TAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCagtacat
gtttttataagcatatcttaGGCTCAGATATTgggaaaattaagcatatg
tcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGGATAAT
TTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69447..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054165 ID=TCONS_00054165|Name=TCONS_00054165|organism=Clytia hemisphaerica|type=transcript|length=11364bp|location=Sequence derived from alignment at scaffold_242:69447..80810+ (Clytia hemisphaerica)
CGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGT TTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATC CATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTT GGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaag aaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAA ATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTC ATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAG TCAATGGTATGTTTTTTACATTAGATTAgacatttgatattttatgcCTA ACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTT AGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAA TTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTG GTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTG GAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGC CTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCC ATGAGTCCAATCCAAGActgtttgaaatttattttaaatttcctATTTGG AGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAActtgatcaaat ttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACAGAAAAATGA AGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaa aaatctttgaaaattgcagataaaatctttaaaaaaacacTTGATGATCA AGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAA AAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAG CGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAG CTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATT ATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGT GGTTTAAATTGTTTTTagtatttacattttttgtgaaatttctagCTTCC ATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATT ACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgttaattaaattt tcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCAT CAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAAT GGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTA CAGTACACATTgctatatcaattttttttaaatatatcatTTAGTAAGAT TTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAAGCCTCAAAT TTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTCAAgcattat acccaatttttactactttgaccccaaaattagtatttttctTAAATATT CTAATGCTtcggcgattttgagcctcaaagtgtataccttattacacaaa tattactagtATTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAA ACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgttaatttttt gcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAA TAAGGTAATTAtattattttctggtttacagacattatgaggaaaagttt tggacaggaggatggaaaaaaaaataaaaataaaattaatgttttaaatt tttttttagtttctttttaaaaatctgaattcaaaggaaataataaaata aaattttacgaaatttccTAAAGTatcaaatttttagatttaaagacaaa agaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACg gataaaaacataaaaaatgtacACATAAAGACTGATATGTGTTTATGTAA GACTGAcgtaggttcccacttaggttcccccatcccacttctGGTATGCC TATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAA TAAAAGCaattacaataaaaaatcaactgcGTAACACAAGAGTTGtataa tttagtttttttttatttacttgcCTAAACCTGGAAAGTAAgacagaaaa aattaaattaaaaattaaaaaaattaaaaattgatagATATCTCATATAA TACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGGGTATATTTT GgggcaaaaatttaatttttgacaaTCTAATTTCACTTATTGGATTTTGA GGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAG AATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCT AAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatgcaGATTACA CACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaaattttt gggggattttttttcattcaacaaccaaatttagaaaattagtATTAATA ACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTC AGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaa taatcatatttttcttctttttttgtcaaACTGATACTTTACCTTTACTG CGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagagaaaaaaacag ttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAGACCTTaagt agtaagtctgcgaccgcagtcggaggcgacccgaaggctcctctttcgat agctgtctacccgaaggtaggggagggcgccactctttctcNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctttcaaagtct ctctaagggtcggaaaaatcagaaagttttaaattagtctctctaagggt cggaaaattcaggaattttatgaaattttttgatttccagagaaaaagtt gtaataaagtctctctaagggtatgacttttttcaaaaatcgaaaaaaaa cattcaaagagtctctctaagggtcaccttttcagcaaaaatcagtctct ttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccctcattcgcca accctagtaccccccggatgaacgttatgtacagaaaaattttatcaCAA CTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTG ATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttgattcttttta gCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGA TAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGA TTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTG ATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAA ACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGACTGATTAATA TTAAagtttccattttcattttaatcCATTAACATCTCTTTCAGCTGAAA GCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCTTACTAAAAC ATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAA GCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCA AAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAG GATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCA ACATCTGATTGTACAGATTTTTctccaaatttaaatttctacAATTTTGA AATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAA ATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTT TTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGA AGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTA AATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccatttaaaggga taatcagatgggttgagatttttttgtttttactaaaagtcaaaaacttc tTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaaaagattttg agGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACC CATAGTGTGCAGTGgggtctgacccccccccccccccttttNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccc cccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatat catactccaggatgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATA GGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttttaccaatat tttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGC ATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCA CTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAA CGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatg tttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGC ATGCATTTGGTGAACctaattttgcagaatttaatttcgcggttttagac AAACACACAAATATTCTCATGAATAAAGAATAACctataaaattggtctt tttaggcaATAAAGgacatattttaaacaaaacatCCTCTCAACCGCAAA ATTATATTCTGCAAAACTtccgaattttgagctgtgaaccaCTAAATGAA ATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTT TTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCA GAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAA AGGTACAAACCGAGGAAGTCctgttttgtaatattttgataaagaaaCCA AAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTC AGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGC TGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTG CGAAAAAAGGTAATTTCATTAATATCCttggtctttattttattattagt gaggttaagtaaatcagtaaaatcacgacgacgaacgaaaatttaaaatt tctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTA AGTGATAGCTCCcaagtacataggtccccccaaaaaagtggtgtTCTTCC AGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctat gaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTC TTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacg ctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCAT GCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGT GGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaaaaaacgaaa ttctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGA TGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTA ACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTCATTTTCATG TTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCT GCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAA CGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaaagaagaaaa gaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAA AGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTAC ACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCT TACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGAT TTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAA ATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAA TAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCA GAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGA GGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAA TCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCG CTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTC GCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAG GATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTA CACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGT GGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATT CGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAA GTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTG ACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATT GTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGC TGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTT ACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGA AACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTA TGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTAC AAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttg aaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCT TACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATT GAtcacatttttatttcatcctATGTGCGTATTAATACCTTCAAACGGGC TATAATAAATAACAAtacattatttttttgtatttttttcatggTTTTCA ATTGGCTTGGAAacttttataaacaaaacttttacAGGACATAATACTTT AttatacatttttaatttttgtcattttttggtaaaaaagacATCGGATA TACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCT TCAAAATGCagtacatgtttttataagcatatcttaGGCTCAGATATTgg gaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaagaaatact ttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaat tcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054165-exon-scaffold_242-1491911889:69447..69802TCONS_00054165-exon-scaffold_242-1491911889:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:69447..69802TCONS_00054165-exon-scaffold_242-1510915933:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:69447..69802TCONS_00054165-exon-scaffold_242-1575043694:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:70811..70930TCONS_00054165-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:70811..70930TCONS_00054165-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:70811..70930TCONS_00054165-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76213..76290TCONS_00054165-exon-scaffold_242-1491911889:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76213..76290TCONS_00054165-exon-scaffold_242-1510915933:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76213..76290TCONS_00054165-exon-scaffold_242-1575043694:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76561..76650TCONS_00054165-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76561..76650TCONS_00054165-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76561..76650TCONS_00054165-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76904..76993TCONS_00054165-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76904..76993TCONS_00054165-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76904..76993TCONS_00054165-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78006..78098TCONS_00054165-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78006..78098TCONS_00054165-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78006..78098TCONS_00054165-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78228..78305TCONS_00054165-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78228..78305TCONS_00054165-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78228..78305TCONS_00054165-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78813..78878TCONS_00054165-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78813..78878TCONS_00054165-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78813..78878TCONS_00054165-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:79084..80810TCONS_00054165-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:79084..80810TCONS_00054165-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:79084..80810TCONS_00054165-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69447..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 77.5103 53.696 46.7737 37.1293 5.59367 7.07108 11.4987 8.77081 8.52233 9.50224 4.51689 9.32593 2.80498 4.41992 1.54354 3.41838 1.29784 0.461386 0 0.338506 36.03 54.6853 0 0 0.320368 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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