TCONS_00054165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054165
Unique NameTCONS_00054165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2698

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054165 ID=TCONS_00054165|Name=TCONS_00054165|organism=Clytia hemisphaerica|type=transcript|length=2698bp
CGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGT
TTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATC
CATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTT
GGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaag
aaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAA
ATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTC
ATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAG
TCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGAC
AGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGC
AAATGGAAAAGCTAATGGGAAGAAAGCACCAGCTAAGAAAGAATCAAGCT
CGGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCA
AAAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGA
CAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAG
CTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGT
GATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGCCCCAGCTAAGAAAGT
AGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGG
AAGAAAAACCTAAAGCTAAAGCAAAAGCTCCTGCCAAAAAGAAAGCTGAT
TCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAA
AAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAG
AAGAGGAACAGCCCAAAAAACaaaaagaagaaaagaaaaatttgaaacgt
AAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGC
AACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGATGGAC
TTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCCGTATT
ATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCTGATTT
TGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACACTACTT
TAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACG
CCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTC
AGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATA
ACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATGACACT
TATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGT
TGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACG
ATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGAT
GTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAAGATTT
CAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTG
GCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGT
GGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAA
AGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAATGATT
CAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTATTAACG
TATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCA
GGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTCCTCTG
TAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGAACGTT
GCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTTGAAGG
TGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAACTTGCC
GAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaatctaG
CTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATTGACAT
TGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttttattt
catcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATAACAAt
acattatttttttgtatttttttcatggTTTTCAATTGGCTTGGAAactt
ttataaacaaaacttttacAGGACATAATACTTTAttatacatttttaat
ttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTGGTAAA
TAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCagtacat
gtttttataagcatatcttaGGCTCAGATATTgggaaaattaagcatatg
tcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGGATAAT
TTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69447..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054165 ID=TCONS_00054165|Name=TCONS_00054165|organism=Clytia hemisphaerica|type=transcript|length=11364bp|location=Sequence derived from alignment at scaffold_242:69447..80810+ (Clytia hemisphaerica)
CGGCGCCGTAAAAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGT
TTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATC
CATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTT
GGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaag
aaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAA
ATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTC
ATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAG
TCAATGGTATGTTTTTTACATTAGATTAgacatttgatattttatgcCTA
ACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTT
AGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAA
TTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTG
GTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTG
GAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGC
CTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCC
ATGAGTCCAATCCAAGActgtttgaaatttattttaaatttcctATTTGG
AGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAActtgatcaaat
ttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACAGAAAAATGA
AGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaa
aaatctttgaaaattgcagataaaatctttaaaaaaacacTTGATGATCA
AGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAA
AAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAG
CGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAG
CTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATT
ATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGT
GGTTTAAATTGTTTTTagtatttacattttttgtgaaatttctagCTTCC
ATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATT
ACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgttaattaaattt
tcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCAT
CAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAAT
GGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTA
CAGTACACATTgctatatcaattttttttaaatatatcatTTAGTAAGAT
TTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAAGCCTCAAAT
TTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTCAAgcattat
acccaatttttactactttgaccccaaaattagtatttttctTAAATATT
CTAATGCTtcggcgattttgagcctcaaagtgtataccttattacacaaa
tattactagtATTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAA
ACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgttaatttttt
gcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAA
TAAGGTAATTAtattattttctggtttacagacattatgaggaaaagttt
tggacaggaggatggaaaaaaaaataaaaataaaattaatgttttaaatt
tttttttagtttctttttaaaaatctgaattcaaaggaaataataaaata
aaattttacgaaatttccTAAAGTatcaaatttttagatttaaagacaaa
agaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACg
gataaaaacataaaaaatgtacACATAAAGACTGATATGTGTTTATGTAA
GACTGAcgtaggttcccacttaggttcccccatcccacttctGGTATGCC
TATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAA
TAAAAGCaattacaataaaaaatcaactgcGTAACACAAGAGTTGtataa
tttagtttttttttatttacttgcCTAAACCTGGAAAGTAAgacagaaaa
aattaaattaaaaattaaaaaaattaaaaattgatagATATCTCATATAA
TACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGGGTATATTTT
GgggcaaaaatttaatttttgacaaTCTAATTTCACTTATTGGATTTTGA
GGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAG
AATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCT
AAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatgcaGATTACA
CACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaaattttt
gggggattttttttcattcaacaaccaaatttagaaaattagtATTAATA
ACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTC
AGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaa
taatcatatttttcttctttttttgtcaaACTGATACTTTACCTTTACTG
CGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagagaaaaaaacag
ttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAGACCTTaagt
agtaagtctgcgaccgcagtcggaggcgacccgaaggctcctctttcgat
agctgtctacccgaaggtaggggagggcgccactctttctcNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctttcaaagtct
ctctaagggtcggaaaaatcagaaagttttaaattagtctctctaagggt
cggaaaattcaggaattttatgaaattttttgatttccagagaaaaagtt
gtaataaagtctctctaagggtatgacttttttcaaaaatcgaaaaaaaa
cattcaaagagtctctctaagggtcaccttttcagcaaaaatcagtctct
ttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccctcattcgcca
accctagtaccccccggatgaacgttatgtacagaaaaattttatcaCAA
CTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNTTGGTATCTGGatcctgaccccccccctgaccAAAAAGGGTA
CTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAA
AGCAGTCATAAATAGTAAAAAATTTATAAGTGATAACAAAACAGGCCATG
TCTTAGAAAGGTAGCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGT
GTTTTACCACCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAA
TAAGTGGGCGCTAAAAAAGGGCATTAAAAATGGTCAGACAACAGAACACA
TAATTGTTCTGGGTTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAA
TGTTATCAAGATATTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTT
ACTTTTGCGGGCAGTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGT
GATATGCTTGTTTACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAG
CCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGAC
AGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAA
TTAATGCAGTGATCTCCTTTAatgtttgaaaatctctttcaTATCATGTG
ATGCtgcaaaattttgaagattaatTTTCACATCTAGATTGGGTTATATA
ACAAGAAAACATGAGTTAATACCTGCCTTATGGATCATATGGAACAGTGT
TGTTGGGCCTCCTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCT
AAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTG
ATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttgattcttttta
gCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGA
TAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGA
TTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTG
ATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAA
ACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGACTGATTAATA
TTAAagtttccattttcattttaatcCATTAACATCTCTTTCAGCTGAAA
GCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCTTACTAAAAC
ATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAA
GCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCA
AAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAG
GATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCA
ACATCTGATTGTACAGATTTTTctccaaatttaaatttctacAATTTTGA
AATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAA
ATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTT
TTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGA
AGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTA
AATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccatttaaaggga
taatcagatgggttgagatttttttgtttttactaaaagtcaaaaacttc
tTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaaaagattttg
agGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACC
CATAGTGTGCAGTGgggtctgacccccccccccccccttttNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccc
cccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatat
catactccaggatgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATA
GGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttttaccaatat
tttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGC
ATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCA
CTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAA
CGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatg
tttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGC
ATGCATTTGGTGAACctaattttgcagaatttaatttcgcggttttagac
AAACACACAAATATTCTCATGAATAAAGAATAACctataaaattggtctt
tttaggcaATAAAGgacatattttaaacaaaacatCCTCTCAACCGCAAA
ATTATATTCTGCAAAACTtccgaattttgagctgtgaaccaCTAAATGAA
ATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTT
TTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCA
GAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAA
AGGTACAAACCGAGGAAGTCctgttttgtaatattttgataaagaaaCCA
AAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTC
AGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGC
TGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTG
CGAAAAAAGGTAATTTCATTAATATCCttggtctttattttattattagt
gaggttaagtaaatcagtaaaatcacgacgacgaacgaaaatttaaaatt
tctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTA
AGTGATAGCTCCcaagtacataggtccccccaaaaaagtggtgtTCTTCC
AGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctat
gaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTC
TTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgacg
ctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCAT
GCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGT
GGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaaaaaacgaaa
ttctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGA
TGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTA
ACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTCATTTTCATG
TTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCT
GCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAA
CGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaaagaagaaaa
gaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAA
AGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTAC
ACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCT
TACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGAT
TTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAA
ATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAA
TAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCA
GAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGA
GGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAA
TCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCG
CTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTC
GCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAG
GATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTA
CACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGT
GGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATT
CGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAA
GTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTG
ACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATT
GTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGC
TGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTT
ACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGA
AACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTA
TGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTAC
AAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttg
aaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCT
TACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATT
GAtcacatttttatttcatcctATGTGCGTATTAATACCTTCAAACGGGC
TATAATAAATAACAAtacattatttttttgtatttttttcatggTTTTCA
ATTGGCTTGGAAacttttataaacaaaacttttacAGGACATAATACTTT
AttatacatttttaatttttgtcattttttggtaaaaaagacATCGGATA
TACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCT
TCAAAATGCagtacatgtttttataagcatatcttaGGCTCAGATATTgg
gaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaagaaatact
ttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaat
tcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054165-exon-scaffold_242-1491911889:69447..69802TCONS_00054165-exon-scaffold_242-1491911889:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:69447..69802TCONS_00054165-exon-scaffold_242-1510915933:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:69447..69802TCONS_00054165-exon-scaffold_242-1575043694:69447..69802Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:70811..70930TCONS_00054165-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:70811..70930TCONS_00054165-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:70811..70930TCONS_00054165-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76213..76290TCONS_00054165-exon-scaffold_242-1491911889:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76213..76290TCONS_00054165-exon-scaffold_242-1510915933:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76213..76290TCONS_00054165-exon-scaffold_242-1575043694:76213..76290Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76561..76650TCONS_00054165-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76561..76650TCONS_00054165-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76561..76650TCONS_00054165-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:76904..76993TCONS_00054165-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:76904..76993TCONS_00054165-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:76904..76993TCONS_00054165-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78006..78098TCONS_00054165-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78006..78098TCONS_00054165-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78006..78098TCONS_00054165-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78228..78305TCONS_00054165-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78228..78305TCONS_00054165-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78228..78305TCONS_00054165-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:78813..78878TCONS_00054165-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:78813..78878TCONS_00054165-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:78813..78878TCONS_00054165-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1491911889:79084..80810TCONS_00054165-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1510915933:79084..80810TCONS_00054165-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054165-exon-scaffold_242-1575043694:79084..80810TCONS_00054165-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69447..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	77.5103	53.696	46.7737	37.1293	5.59367	7.07108	11.4987	8.77081	8.52233	9.50224	4.51689	9.32593	2.80498	4.41992	1.54354	3.41838	1.29784	0.461386	0	0.338506	36.03	54.6853	0	0	0.320368	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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