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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2718861..2725395+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00154.1 ID=Blg00154.1|Name=Blg00154.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6535bp|location=Sequence derived from alignment at Sc0000026:2718861..2725395+ (Branchiostoma lanceolatum) CCCAAAATGGTACATTTGATATTTCTTTTACACAGCCAGTTTTAAGTATT
AAGAATACCTCCGATGTGTTTACGCACGATTTGGCGAGCTTCAGACAATT
GAGTGATTTACTTAGTACATATTCAACGGTGTTTACCACCAGCTCTGTAC
AAAACATCAACTTGCCTCACTTTGTTCAGTTAAAAAGACGAAATATGACA
CCGAATTTCCTCGTTCTTTCCTTTCAAGCTATTGGCCAGGTTCACCCGTC
TGAACAAAGAAACTGGTGTTTACCAGTTGCTGCCATGTTGACGTTGTGAT
GTGAGGTGCTCAGTAGCATTGTTGAGAATTGACACCTTATACCTGTACTC
CCCAACCAGTCAATGTTACTGTGCTTTGCGACGGCAGCGACGCTGATCAT
GTTACATCTCCAACCAATGAAGTTCGCAAGATGAAATAACATTACTATGA
ACTGTTCCCTTTTACTTACTAGGAAACATTGCTATTGCGACTGTTGCAGA
CGGTGATGCTTTTGGGTAGCAGAAAGTGACTTTATCGATCTGTAATCTCT
TTAGTAGTCTATTCTTGCTACAAACTGGCCATGAGCTCGGAGAAGGTTGC
GTACGGAGTCGAGGTTCCCGCCCGCGCCCGCCGAGACCGACCCGGCGGGG
TCCGACCAGTGACGGTGGCCGTGGCAGCCGGGGCGGGGGTGCTGGTAGTG
GCGGCCCTCGTCTTTCTCGCTCACGAGGTCAAGCATGTCCGAGAGAAGTC
CACTCAAGAAGTGTCTCAACTGAAAGACCAACTGCGAGATCAATTGGCGA
AGGCAAATGACCAACTCTCGACGCTGAAGGATCGTACCTTGGCCATGGAG
ATCAAGCAAGACGCCGATGGTAGAGACAACGAGGAAGCGTCCTCTCACAA
GGAGGAAATGACGGCCATGAAAATCCAACTGTCGTCCCTGCAGACCCAAC
TTGACAGCGAACGTGCGGAAGTGTCGTCCCTGAAGACAGAGTTGCAGAAG
GAGAAAGCTGACGGGGCGTCTTTGAGGGAGCGGCTGGCTGTGCTGGAAAC
CAAGTTCCAACTCGGGCATGCCGAGGAACAACAGTTTGGAAACATTCGAG
AGGTAAGTTTTTGCCAGTAACTTGCTGCAACAAGGAAATAAAATCTCATC
GTGCGTGGCTCTAAGTTCAATGAAGCGTAAATAGGTTCCTTTCTTTAAGT
TAACAATTGCTTCTTAGCCTTAAAATCTTGGCATTGGGTCTTTAGTTAGA
AGGAAGTAGAATTTGACATTTTGTTCCATTCTTGTTCAAAATACTCTCAA
CATACAGTAATGTACGTAACCAAGCTTTGAGCAAAATATCTAGGCTAATG
GTTTCTTTTTTTATTGCTTTGTTGGGATATTATGGCAATTAAGATGATGA
TCATTAACTCCAGGTGTTTACAAGAGCCAATATGAACAGCTAGTTAAAAA
GTCTGAACCAACTTTACCCTATTTCTTAAGGACGGGAAGCCGAACCAAGC
TGTCAGTGTCTCTGGACACAACGCCACCTTGCGGAGATACAGGCGATCGC
CCACTGACTCCGTCACGTCACCTGGCGGTATGTAGGATATTACACTTTTG
TTTGGACTTGATTTGAATACACGTAAGATGTATCGAGAAGTATGCCTGTT
GATTTAATTACCTTCGCCAAGAAAGCTATGTTTTGCCCAGCGTGCGCTTG
TCTGTATATGAACAATCGAGAATGCCTTGGTGGATTATTTGGTATGTCGA
TGGTCTTTATTAAACCTCGAAGTAATTAGATTTTGGACCCCCTTATAAAT
GATCAGGATAGTTTATAGATCCGCTATATTGCATGATAAAACTCTTTATC
AAGTTTCGGTTACACACTGGAGCAAATATTCCAATGCTGGCAGGGCCTGT
CCTGATGAGCCCTACATCTTGTGGTCAAAACACAAAGGGATAGCTAGAAC
CTGTGTACAACTTGTTTTTGATGTGTGACTAGCTTAAGTGATGCTTGATA
TAGTGAATTAGTAATTATGCAAATCAGTATCTAATTTGCATGATTAATTG
AGAAATTTTATAAAGCCACCGCATTCCATGACAGGACTATTAAAGAATGT
AACATATGTACTTGAGAAATAGAGGGACGTCGAATGATAAAAGTTGTGCA
AATAAAGACCGAATTTGCATAATTATTGCCACGGGAAAATACTGTAATTC
CATATTGGTATTATCACTGCATGGAAACAAAGATTTCCACAAGTTTGCAC
GCTTGGGCACTATGGTGAAACCCCACATTTCCTTGCTGTGTACTCGGCTT
TCCTACCCCCCGTGTCACCAAGATTGGACACATGTGCACACAAAAGTCAA
TCTATCATGAACTTTACGAACAGTGATTCCGTGTGCTTTCGGTATGACGA
GGTGGTATAAGGGAGGGGGCTGGGAGGGGGCAGGCGGGTGCCCGGAGGGG
GGGGGGGGGGGTTTCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCCGGGGGGGGGGGGGGGCGGATTTCGG
GGGCGTAGTAGCATAGCAACGACACTACTTTCAATGACAAAAGGTATTTT
GAAGGAGTACCCGGATGTGTCTGGACGGCCCGCGCGGTTAGACCAACAGG
AAAAGATAATTAGGTGATAATTACGCGATAATTACTGCTGAATTATGCAC
CACTCGTTCGCAAACAAAGGCCGACACATGTAGTTTCCACACATGTCCAC
ACGTTTACACACTTGTGCGCACAGGTTTACATCGAAGGACACAAAGTGTA
CACGACAGTGGTCCGTTTACCCAGATGTGCATATAGGTTCCCAAAAAGGG
ACACATCGCGTTTCCACTGTGGGAACTCATTGAAACCCGTGGAAATTAGG
GATTTCCTAGCAGGTATACACAGGTTTTCAAAGCGGAAATCTGTCTGTTC
AAGCAGTGTATATAACTGGAATTTCAAACTTCTGTGTCTTATTTGGGCAA
AGAAGATGATCAACTTATGTAATTTACGAAAAAGATAATTTTATTTGCAT
GATTTAAGAGAAACATGATATATCAGTCGAAAAGGTTAAAATCATTTGGC
AAAGGTAAGAAGTCGTGGAACTCTAGTTTTGTATTATGGTGGTATTTCTT
TTTTCTTATATCCATACTTTCCACATCGTCAATTTGTCAAGTTGGCGCTA
TATCACATATACTTTGGGTCAAATTCACTTGGCAACAGAATTTTGGCCGA
TATTTCTTCTTATGTTACATCTTATACCGCCGTGTTTGAGTCTTTGTATT
TTGCTATTTTAATGAAACGGGGCGATTTGAATAACAGCATCACCATATTT
CTTTCGAGCTAGCACTGATATAAAATCTCACTCTCACTGCAACTGTCGCA
GGTCCCATTCGGGGTCCTGAAGACCCGGCCGGACGAGACGGGCGGGACGG
CCGTGATGGTGTTCCCGGACCCCCCGGGACCCCCGGGATCCCCGGGCCTC
CTGGTGGATGTGGAGGGTGTGGGGAGTCATCTTGCCCCAAGGTAACTTTA
GGGCATTCGTGTGCTTACAGATGCATTTTCTGTTAGTTAGTTAGTTAGAA
TCCTCCCACACCATAAGGTGTATAGGGCGGGGCCCATCCCCGTTTCATAG
CCCTGGGCCACACTGTGGTGCAATCACTGCAGCAGGGGGCTAGTCCACTG
GCAGTGGAGTGTGTTTAACTTCCATACTGTTTCATAAGTATGTACCATTT
TTATAAAGTCTTTGGTATGACTGAATGCGCCTCTTGACCAGAGGTGTCCT
GCCCGGGAGTTGAACAAGGGCCTTCTGGTTCCAAGTAATCAGAACCAGAT
GTGGTAAGTAGCAGAAGCGCAGACCACTACACCACTGTACTTATCATTAT
TTGATAAATATGAACTGGAGCTCGAGGCGAACTTTTTTTAGGCTAAGCCG
ATGATTTACATCGAGCTACGCGTAACTTTGGACGACTTCATACTGTACCC
TTGACAATAGGTAAATACGTATATATATATACGATGAAATTTACCATCAA
TGATTATTCACATCGTATAGCGGCTGTGTACTGCAGTACCGCTAGGCATG
GAGAGCGGAGCTATTCCGGATAGCCACATCACGGCGTCAACTACGCACCC
GCATTGTGCCACCAACAAAGCCCGGCTTCATTCCCCGGAAGAGAGTCAAA
CAAGCCAGGGAGGATTCGCCGGAGCCTGGTGCGCCAACCACCCGCTGAAC
ACCAACCAGTGGCTACATGTGAGGGGAAACTGCACGGTGTAACTTGCTTT
ATTGCCAATCCTATGTTATTCTAGGGTCACATTTCCTAACCGGGGCCCGG
CCGGGCTGTTTGCGGAAACGAAAAATCAAAGTGTGTGTCAATAGATTTGC
ACAAGCTATGCTCTTAAATAATTTGGGTACACTTTTTGCTTTTGTCGTCT
TTTATATCATACTTTTAGTCCCCAAAGACCGGGCCCGGATTGGAAATGTG
ACCCTAGCATAATTGTGCCCTAGGTAGTATAACTCATATGCCGCATCTGT
TGTTAGATTGCGTGTTTCTTTTCATTGATATGAAACCTTTTTTTCTTCCT
CTGGCATTCATATTTTCATCAAGCCGACGTTGATTGTATGAGCTTAGAAG
ACAACTGTCGACAACATGTCTACACGTATTTGACATTAATCCGCCGGATT
ACATAAATCCGCCACTTTGAAAAACAGTGGGTTTGAGAGATCTCTAGTGC
AGCACCCCCCAGGTATGCACAGTTTAGATATACAGGAGTGGGGGTTGACG
TTGGGTTGGAAGCTAAAGATCTGTTTGGACGTATCTTTTAAGGTTGGCGG
AGTTATATACCCCAGAATTATGTTTAACTTAGTAACCAGTCACATTTATT
ACATGGAACCTGGTAACATATTGAGTGAAGAACTTGACGCCAGATTGAAC
AGGTACACTGACAATCGTACCAAGGGGTAGTGTGGCGTAACGGCAGAGTG
TTCGACTCAGAGCCAATAGGGCCCGAGTTCGAATCCCCCCGACGCCACCG
ATGCTGTGCCCTTGGGAAATGCACTTAACACGACTTTCCTCACTTTGCCC
AGGTGTATACAAATGAAAAATGGGTATATTGTTATTTGAACGTGGCACTA
TTATTATAAGTTATAAAACGTTGAGTGCAGTGCCAAGTCCTTGTCTGTCA
AAAACCGAATTTAAAAAAAATCGTACCAAGATACCGTGTTCCTCCTGGTC
AGGTTGACGTGGGAGCAGAGATTACTGTAGCTGGAGTCATCACCCAGGGC
AGGCCAGCAGCAAATCAGTGGGTGAAATCCTACAAACTACGCTTCAGCAC
AGACGGGACAACGTGGTCCACATACTTGGACAAGTTCGGGCGGGAGAAGG
TTGGTAAACCTTGTCTTCTGCACTAGTCTAAACTTTTCAGAAACAATATA
CTTTTCCCTCGTACTTGTATGATCATTTCTCGTATTTGTGGCGAAAGTGG
TAGAGCGCGCGGCTGTCAAACAATGGGACCTGGGATCTAATCTCGCCAAG
AAACTTGTCCGAACTTGCGCCCCGACGTTGTGCTCTTGGGAAAGGCATGA
TTTTCCTCACTTCACTCAGGTATAAATGAGTACCTAGCTCATCTAGGGTT
AGGTCCCTCGGATAGGGCGTTAGATGGAGGTCCCGTGTTTGGGAAGAGCC
ACACCCCGCGCACGTTAAAAACCCACCACACCTTTCGAAAAAGAGTATCG
GCATGCCCCGGTGTGCATGCGATGGACCAAATCTTACAGTCAAGTTGACA
TCTTGAAAAGGTGATAGTCACCTGTTATGTTGATCCTTCCACAAGTCTGG
TAAATCTGAATAAAAATAAAATTTACGTGTGGTGTTGCGAGTTACTTGAT
CATTCACTCATTCTCATTCACAATACCATCCTAGGTCCTCTCTGGCAACT
CTGATCAGAACACCGAAGTGCGCCACCTGTTGGACCCGCCGGTAACTGCA
CGTTACGTCCGGTTCTGGCCGCTGACATGGAATAATCACCTCAGCATGCG
TGTGGAGGTCTTGGGACAGTAAGTACACAGCTGAAGTCTTCGATCTGTTC
TCTGTGAATTTTCACAAGGGGATTTTGAAATACTAGTAAGTGATGTAATG
TCCCAGTAAAGGCATTGTTAAATATGTTTCCGTTGACATTGCACAACGAC
AAAGTGTTTTTGGCTTAAGTGATAATTTACATAATCTTATGCCGATTATG
CAAATCCGGCGCTAGGTTGCATAGTTAATGAGGAAAGTTTATTAAACCAC
GGCTTTCCATAATAGGACCCTAAAACACAACATAAGTAATGAGAAAGAGA
TGAATATCGATGATATCAATCATGCATATGAATACCATATTTGCATGAAT
AATGACAAAATGCTATTATTTCATCGGCGTTAATGTCGGGGATTTCATTC
TTGCAGCATTTAGAAGTTAAGTACACAAAAAACTAACAAAGACCGCCGTC
GCCATGACTACGTCTTTTTTGTTGTCCATCTTGTT Coding sequence (CDS) from alignment at Sc0000026:2718861..2725395+ >Blg00154.1 ID=Blg00154.1|Name=Blg00154.1|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000026:2718861..2725395+ (Branchiostoma lanceolatum) ATGAGCTCGGAGAAGGTTGCGTACGGAGTCGAGGTTCCCGCCCGCGCCCG CCGAGACCGACCCGGCGGGGTCCGACCAGTGACGGTGGCCGTGGCAGCCG GGGCGGGGGTGCTGGTAGTGGCGGCCCTCGTCTTTCTCGCTCACGAGGTC AAGCATGTCCGAGAGAAGTCCACTCAAGAAGTGTCTCAACTGAAAGACCA ACTGCGAGATCAATTGGCGAAGGCAAATGACCAACTCTCGACGCTGAAGG ATCGTACCTTGGCCATGGAGATCAAGCAAGACGCCGATGGTAGAGACAAC GAGGAAGCGTCCTCTCACAAGGAGGAAATGACGGCCATGAAAATCCAACT GTCGTCCCTGCAGACCCAACTTGACAGCGAACGTGCGGAAGTGTCGTCCC TGAAGACAGAGTTGCAGAAGGAGAAAGCTGACGGGGCGTCTTTGAGGGAG CGGCTGGCTGTGCTGGAAACCAAGTTCCAACTCGGGCATGCCGAGGAACA ACAGTTTGGAAACATTCGAGAGGACGGGAAGCCGAACCAAGCTGTCAGTG TCTCTGGACACAACGCCACCTTGCGGAGATACAGGCGATCGCCCACTGAC TCCGTCACGTCACCTGGCGGTCCCATTCGGGGTCCTGAAGACCCGGCCGG ACGAGACGGGCGGGACGGCCGTGATGGTGTTCCCGGACCCCCCGGGACCC CCGGGATCCCCGGGCCTCCTGGTGGATGTGGAGGGTGTGGGGAGTCATCT TGCCCCAAGCGGCTGTGTACTGCAGTACCGCTAGGCATGGAGAGCGGAGC TATTCCGGATAGCCACATCACGGCGTCAACTACGCACCCGCATTGTGCCA CCAACAAAGCCCGGCTTCATTCCCCGGAAGAGAGTCAAACAAGCCAGGGA GGATTCGCCGGAGCCTGGTGCGCCAACCACCCGCTGAACACCAACCAGTG GCTACATGTTGACGTGGGAGCAGAGATTACTGTAGCTGGAGTCATCACCC AGGGCAGGCCAGCAGCAAATCAGTGGGTGAAATCCTACAAACTACGCTTC AGCACAGACGGGACAACGTGGTCCACATACTTGGACAAGTTCGGGCGGGA GAAGGTCCTCTCTGGCAACTCTGATCAGAACACCGAAGTGCGCCACCTGT TGGACCCGCCGGTAACTGCACGTTACGTCCGGTTCTGGCCGCTGACATGG AATAATCACCTCAGCATGCGTGTGGAGGTCTTGGGACAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00154.1-exon-Sc0000026-1570713199:2718861..2719962 | Blg00154.1-exon-Sc0000026-1570713199:2718861..2719962 | Branchiostoma lanceolatum | exon |
Blg00154.1-exon-Sc0000026-1570713199:2720341..2720437 | Blg00154.1-exon-Sc0000026-1570713199:2720341..2720437 | Branchiostoma lanceolatum | exon |
Blg00154.1-exon-Sc0000026-1570713199:2722262..2722401 | Blg00154.1-exon-Sc0000026-1570713199:2722262..2722401 | Branchiostoma lanceolatum | exon |
Blg00154.1-exon-Sc0000026-1570713199:2722931..2723128 | Blg00154.1-exon-Sc0000026-1570713199:2722931..2723128 | Branchiostoma lanceolatum | exon |
Blg00154.1-exon-Sc0000026-1570713199:2724113..2724259 | Blg00154.1-exon-Sc0000026-1570713199:2724113..2724259 | Branchiostoma lanceolatum | exon |
Blg00154.1-exon-Sc0000026-1570713199:2724795..2725395 | Blg00154.1-exon-Sc0000026-1570713199:2724795..2725395 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:2718861..2725395 + |
Properties
Property Name | Value |
GeneID | Blg00154 |
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