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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:2408477..2414913+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00175.0 ID=Blg00175.0|Name=Blg00175.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6437bp|location=Sequence derived from alignment at Sc0000026:2408477..2414913+ (Branchiostoma lanceolatum) GTTCACTTTGTTGTGTTTGAGTAAATAAAGGACAACTCCAAGGAGTCAAA
AAGAGAAGAACAGTCAACGAGACACAGCGGGCATTGCTGATTGGAGACCG
AGCGCGGACAATACATTCATAGTCTGTAAAATAGAACACAGCCAGGTACG
ATCTTCATGTTTTGTTCGTTTATTATTTGGTAAATACAGTCGTTCTTCTG
TACTACATATGTATTCGTATCTGTAAAGCTGGTATACGGGCCAAGGACGT
TACGCACCAGCTACGCTGCTTAGATACTAGTGTATTTACTCTTGTGTCAT
TATCTTCACCAAGAAGGTTAATATGTATTCGGTGCTGTATGTCTGTGTGT
GTGTGTGTGTGTGTGGGGATGCGTGTATGTGTGTGTGAGTGAGAGAGAGA
AAGAGAGTGTGTGTTTGTGTGTGTGTGTGTGCATGTGTGTGTGAGTGTGT
GCATGTGTGTGTGTGTGTGTGTGCGTGTGTGCATGTGTGTATGTGTGTGT
ATGTGTGTGTGTGTGCATGTGTGTGTATGTGTCTGTGCATGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAACTGTTTGCTTGAGTAACT
GTTACCTTGCGTATTATATTACCTGGATGTCTAACAATCGAAGTGTCAGC
ATATGTCACATTGAGATGATAGAATGATATGACAATACACTAACAATGCA
GCAACATTAGAAACTAGTTCTTATACCTAATTCTTAATAACGCATTGCAA
TTTACGCTAGCTTTGTTAAATGAGCGAGACCTTTATTCTGTTATGTGTGG
GTTCCATGACTTAGCTGGTAGAATTGTTTCCTTGGTGTCAGAAGTAGGTA
AAATATATTTTTGTAACGTTTTAACTACTAGAAATTAAAGGACCTCCCCC
GCGGGCATTTGAAGAACAATATTTACAAAAATTTAATCCACTAAGACGCA
GATTGTTTGATAATGTCTTGATTTTGATGCCAAATTGTTCTATCGATATG
AGTAGGGTTTCATCCGAGTTTGAGTGAAACAAACCTACCAGTCCGGTCTT
ACGCAGTTTGTACCTACTGTACAAAACTAGTGTGTAACGCTTAATAGCTC
GCTATGCATAACGGGAAAAGGTGTTCAGACCCTCGTTATAACAAGTATGC
TTTATTGTATTTTTGTTTGTTTCAATGACATATAATAAGGAAATAAAATG
TTGTTAACTTTCATGTGCATGTTCTATTTCATGTACCTTTTTAGTCAGAA
CAATGGGTATTGTTGTTCCACAGGACCAACCTAGCAACAGACCTAGCAAC
CATGGGTGCACAGTGTACAGGGGGCGAGGCAAACATAGAGGTGAGATAAA
TCATATGATATTAGCATATGGTATAAATCAAAATACTGCATCTTTTACTA
ATTCGTAGTCGCCCACACGGTTGTTTGTGTGTGAGTGTGTTTATGTGTGT
GTGTGTGCGTGTGTGTAGGTGTGTGTTTGTTTGTTTGTTTGTGTGTGTGT
GTGTGTGTGTGTGTGTGCGCGTGTGTGTGTATGTGTGTGTGTGTGTGCAC
GGGGCAATAACTAAAGAACCTCTGTTTTGAGATGATATTTTATATGTGTG
TACACACGATTGGCAAAATCGATTTGGGGCCTCCTGGCAGCTGATGTTGG
CATTGCAGCAGAACTTCCGTTTTTCGTATTTTTTGTCATGGACATGCTGT
TACTATTTTTTTCATATCTTATAAGAAGTCGAGTAACTTTTAAACACACA
AAAAGCACACATGTAACATCCTGCTCCCAAGAAAATGGCTTTTTTTACCA
TTACTTTAGAAATTAGTTGTAGGCTAAAAGCAAACCCCTTGGGCCTTCGC
ATAACAATAGTACTGACATTTAACCAATAGGGTCGCAAGGACTCAGCACT
TGTGAAAGCGAAGACGGGGAACTACCGAGGCGGGGGGACGGACGGAAACA
TCTTCATCGCCCTGATTGACAGCGAAGGGAGGAAGTCACGTGACATCCAT
CTTAACCTGCCGTGGGACGACTTCGAAAGGGGCACTGACCTTGAGTAAGT
GGTATATTCTAGGGTTAATGACCCGACCTGAGGTGTTTCAGGTGTCATGA
GGCATGGTCGCTTCCAATAACCATCGAATAAACTTCCGAGTTCGGGAAGG
GAACAAGGTGGTTTATTGCGAGGTAGTTATAGGAACCGACCATGTCTTAA
GACACCGTATACACCAAGGGGAAGCGGGTGATTTAAGTTATCATCATAAT
ATAAACCTGACACAAGTAAGACACAGAATCTTACACACCTTGCCGCTATT
TCCTGAACTGGTCTGCTGTTTCCCAATCTGCAAAGTATACTTTGTTAGAA
ATAATTTTTGAACTCCTTCCATTTTAGCACGACCTAACAAAACAAATATG
GCTGCCTTGGTTTCAGCTCTGAGGGCTGACACGGCGTGCATGCCTGAAAA
TGCCAGCCGCATTGCACTATTACTGAAAGTAGATGTTAGTTAAAGTATCC
TGCTTCATCTTTGTTAAGTGCTGTTAACATTAGTTGACGATGCCTGTTTT
GTCTTGCTTTAGGCTCACAGCGGATGACATCACAGTCCGTCCGCCGCTCC
GTGATTTGGAGGTGTGGCGAGACGACAGCTACCCTCACGACAATTGGTTC
TGTCAATCATTCTCTGTGAAGCTGCACTCGGACCGTAACGGCCGCACGTA
CGACTTCCCTGTCGACCGATGGATCAAAGCAGGTCGGTGGATTAAATTTC
GTAGATCTAAGGGCAGGGGTTCGATCCCAGGGTCGGGCCTAGCCGGGACA
TGTTGTGGGAGATTGCATTCGTGATTATGGATGGTGATGTAAAGCCGATG
GCCCTTTGTCATCTTTCCGAACCGGTGCCGTGTTATATTGTTTGCGGGAA
CGAAATTGAAGCGTCAAGAATTATACACAAATTATGCTCATGGCGTTTTT
TTACGTTTTGCGTGTCTTGGTTTATCATGTCATAATTTTCGTTCCCGTTA
TCTGGCCGGCCGGGCGCTGGTTTTCAAAATGTGATCCAAGCATGGAAGGA
AGGCTTACGGATAAGCCTCGGTCGTAAAACCTCTTTTTTTTTATATGTTC
TTTTGTTCCTCGCGTTATTACCTCCGGGAAGAAGGTTCACCTCTAAATGG
GGTACTGTTTCTGTGCCCGCATCTATAACTCAAGATCATCTAAATGGATT
TGTTTCCATTTCGGTATGTTGGTATTTATCAAGGTCCATATAAAGCGGAG
TAATTTTGGGCACCGTAGCAGTATTTTTGTTTATGAAAACGCAATTTAAA
AGTTATGTGTCGCTTTTTGTAGGTGAACGAGTATGGGTGCCCCCTGGCGG
TGCAGTACTGCCCCAGTACGACCGACACGCAGTGAGCCGTGAGAAGGAGC
TGCAGGACATGAAGAAACGTTACGCCTCCTTCACTCCTTCCCCAGGCCTG
CTGCCCATGGTACGATTACAGACCGATCTGGTTGTCAATCAAAATTAGCG
ATTCGGCCAATAAGTTGAATAACAGGGCGGGATTTGGTAACGTGATCATC
ATTGGGTGTATCCGCCTTAGTATCCGCCATTTTGTCCATAGAGTTGCTAG
GGTGTTGCTAACAGAGCGTGGATTCCGGAACAGGTTATTTGCCACCGACA
AGGCGGTTATGTCTTTGGTAAGCGTTTGTTCCTTTGTTTGTTTGTTCATT
CGTTCGTTTGTTTGCTTGTTTCTTTTTGACTGTGTTTATGGTTTAGTGTG
TTCGATTATGGGTCTCGTAATGGCTTCCTACAGTGCTGCAGCGGAACTTT
GGTTTTAAAATTTCCGTTACTGATGATCAACACGTTATGGTCACGATGCT
TCGGACTGGCAAATGAATGGTGCTAGTTTTGACCCACTATCGGCTTTCCT
TACAACTTCAGGCTTGTTTTTGTCCTAAGCTTTGAAACGAGAAAACAATG
GATATTTATATTTTACTACATGTACTTATCATTTTCTACCAGCTTTCAAT
TGCAAACGCAACCGTCTGGATGCATAAGTTTGGCTTGGTATGTGATATCA
CAAAGCCATTATGTACTTAGCCTTGTTGCTGTTGACCTAAATGTGTTTTT
CATTATGTTTCGCGCATTTAGTTGGCAAAACTACCTCCGGAGGACGAGTT
TTCAACCCGACAGAAGGTACACATCTTTCTAAATCATTCTATCAAGTCCG
ACCGCTCTGAATTCAACTGGCTCCATTATCACACCTTACTCCAATCTAGC
AGCTGTGAAAGAGAAACTGCTAAAAGTTTGGAAGGCATGTGACTTATAGA
GATGTAACTTAAAGGAAACCCCCAGCAATATTGGGGCCCGAAAATTGGAG
TTTGAAAGTCAATTTATTTTGTGATTTCTATACATGATTAGTTCAAACAA
CGCTATCACATGTTATAAATATAGCGACGTCCATGATGCAAATATACGAC
ATCGTTGTGATGTGACAACTCACTAAAAATCGTCGCCGGGGTTTTTGTAG
GATCGCGAAACTAAGAGGATCATCATAAGGCACATTTATGCGCGGTTTTA
GAATGCTCAAAGTATGAAGTTATTACAGAAATATGAAGTTATTACAGAGT
TAGTAAATGGCCCTGGCAAAAAGAATTCAGCATTTTTTCTAAATTTCTAT
TTTCTTGGCCCTAATATTGCTTTAGTTGCCTTTAAAGACATTGCCATGCA
TGCGCTGGATAATTTCATTTTCCAACAATAACTCAAAGTGGTTCAGGGCA
AATCTTTGTTCAGCGACTCTCATATTTTTGATTTGATTTTTGATCCTTTG
CCTTTGCGAACACATTTGCAGAAATCCATGATTACGACGGGGATCACACT
CAGCGTAAAGAATTTGCCGATCGTCATTGACGACGGGAGGTGGGAAACAT
TCGAGGGTATCAACGAGGTGTTCGAAGAAGGCAGAATCCCGAAAGTGAGG
AAATCTCGCGGTAATCTCGCGAGACGTTAACACGATCCTCTCTTTCGAGA
TTATCATCATTTATCGTGAGATTATCATCATTTATAAACTAATTTCCTTC
AATCTCCGTTATAAAATGTGCACTTGTCTGAATGATTTGAAACTTCTGAT
CAAGTTATTTTGAATAAATACTTGTATATTTCGCTCAAGGGAAAAGCCAA
CTGGCAAACTGATGAGCATTTCGGCGCTCAGCGTCTTACTGGAGTCAACC
CAACATCCATTCGCTTGTGCACGGAGATCCCGAGGGCGTGAGTATGGATC
GTTTTCACTTACTTGCCATTTGACTAAAGCAGGTGTTCACAAGTGCTTAC
CGCCATGTTGGCGTCCCTTGCATTTCAGTCGATTGTTTTAAAAAGACATA
CGCACGTATATTTGAGAGAGCCTGCAATAGATCTTGAACCTGATGCGATA
TTCACAACATCGGCTGCAGTAAGGTCCAAATGCCTTTTCGTTGTAGCAGA
TACCTGAATGACCAGGGGTATATATAGATAATCTTAGTCGCACCTTTGAG
TACTTTCAGTTGGTGGATCTCTTTAGCCAAAACGTAGTACCAATTTGTCT
CCACAGTTTTGGCGTAACGTCGCCGATGGTCGAACCTTTCCTGCACGGCC
TGACCCTGGACGCGGCCATGCAGAGGCGGCGTGTGTACATCGTGGATCAC
ACCGACATGAAGATATCGTCATTTGCGTCGGACAAACCTGTGAGTCCAAT
TCATTTCATTTTCATTTCACTTTATTTATTCAGGGATAATACACTCAGCT
CAGCCTTCTTTAATGTGTGCAATATTTGCTTCAGACTAAACTGGACAAAA
AAATACACACAAAAAATACAGGTCCCATAAAACCAAACAAGAAAACTATT
ACAGTATCAGTCTTTACCAAATAACAACCCTTACTACAAAATGTATATTC
AAATATGCAAAGTTTGCATTGATTATATTTTGTGAACGATCGAAGGACTA
AACTTTCCAACCTTGGGGATTGGGACGTACTCAAAATTTTGACATAACTT
CATCAGCCTAGTTCAAGGAATGGACCCGTCTACCCCTGTCTGCTGCAATT
TGTGACTGCAGCAATGGGTCGTAAGTGCCAGATAGCCTATGTCACCCCCC
GTCTCTGTTCAAAGTCGGACAATGGGTCGGGTTATATTTTGTTGCACATA
GAGTAGACTGAGCCACCACTTTGTTCAAAGTTAAAGGGGGCACCCAGTAG
TCTGAAAATGCAACAAATGAATAGATAGAAATAGATATCTTTTATATCAA
AATGTTTACCCTCATTCCATAGATGTGTGCTCCGTATGGACTGTTCTTTG
TCAACGACAGTGGTGACCTGGTTCCTGTGGCCATCCAGCTGTACCCTAAC
GGGGAAGAGCAGAACCCGGCAAGCTTTTTTTTTCAATATCTATTCAAAAT
CCAGAGGGATATGGCCTCCCTGCATCTCAACTGGTAG Coding sequence (CDS) from alignment at Sc0000026:2408477..2414913+ >Blg00175.0 ID=Blg00175.0|Name=Blg00175.0|organism=Branchiostoma lanceolatum|type=CDS|length=1029bp|location=Sequence derived from alignment at Sc0000026:2408477..2414913+ (Branchiostoma lanceolatum) ATGGGTGCACAGTGTACAGGGGGCGAGGCAAACATAGAGGGTCGCAAGGA CTCAGCACTTGTGAAAGCGAAGACGGGGAACTACCGAGGCGGGGGGACGG ACGGAAACATCTTCATCGCCCTGATTGACAGCGAAGGGAGGAAGTCACGT GACATCCATCTTAACCTGCCGTGGGACGACTTCGAAAGGGGCACTGACCT TGAGCTCACAGCGGATGACATCACAGTCCGTCCGCCGCTCCGTGATTTGG AGGTGTGGCGAGACGACAGCTACCCTCACGACAATTGGTTCTGTCAATCA TTCTCTGTGAAGCTGCACTCGGACCGTAACGGCCGCACGTACGACTTCCC TGTCGACCGATGGATCAAAGCAGGTGAACGAGTATGGGTGCCCCCTGGCG GTGCAGTACTGCCCCAGTACGACCGACACGCAGTGAGCCGTGAGAAGGAG CTGCAGGACATGAAGAAACGTTACGCCTCCTTCACTCCTTCCCCAGGCCT GCTGCCCATGAAATCCATGATTACGACGGGGATCACACTCAGCGTAAAGA ATTTGCCGATCGTCATTGACGACGGGAGGTGGGAAACATTCGAGGGTATC AACGAGGTGTTCGAAGAAGGCAGAATCCCGAAAGGAAAAGCCAACTGGCA AACTGATGAGCATTTCGGCGCTCAGCGTCTTACTGGAGTCAACCCAACAT CCATTCGCTTGTGCACGGAGATCCCGAGGGCTTTTGGCGTAACGTCGCCG ATGGTCGAACCTTTCCTGCACGGCCTGACCCTGGACGCGGCCATGCAGAG GCGGCGTGTGTACATCGTGGATCACACCGACATGAAGATATCGTCATTTG CGTCGGACAAACCTATGTGTGCTCCGTATGGACTGTTCTTTGTCAACGAC AGTGGTGACCTGGTTCCTGTGGCCATCCAGCTGTACCCTAACGGGGAAGA GCAGAACCCGGCAAGCTTTTTTTTTCAATATCTATTCAAAATCCAGAGGG ATATGGCCTCCCTGCATCTCAACTGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00175.0-exon-Sc0000026-1570713199:2408477..2408621 | Blg00175.0-exon-Sc0000026-1570713199:2408477..2408621 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2409750..2409816 | Blg00175.0-exon-Sc0000026-1570713199:2409750..2409816 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2410357..2410520 | Blg00175.0-exon-Sc0000026-1570713199:2410357..2410520 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2411039..2411208 | Blg00175.0-exon-Sc0000026-1570713199:2411039..2411208 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2411799..2411935 | Blg00175.0-exon-Sc0000026-1570713199:2411799..2411935 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2413298..2413420 | Blg00175.0-exon-Sc0000026-1570713199:2413298..2413420 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2413616..2413713 | Blg00175.0-exon-Sc0000026-1570713199:2413616..2413713 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2414033..2414165 | Blg00175.0-exon-Sc0000026-1570713199:2414033..2414165 | Branchiostoma lanceolatum | exon |
Blg00175.0-exon-Sc0000026-1570713199:2414749..2414913 | Blg00175.0-exon-Sc0000026-1570713199:2414749..2414913 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:2408477..2414913 + |
Properties
Property Name | Value |
GeneID | Blg00175 |
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