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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000026:1270851..1278351+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00085.1 ID=Blg00085.1|Name=Blg00085.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7501bp|location=Sequence derived from alignment at Sc0000026:1270851..1278351+ (Branchiostoma lanceolatum) ACAGAGGTAAACAGGGCTATGGAATTGGTCCATACGGTCAACAACGTTTA
AAAACGTTTTGCGATCTTAATACACATCCCTAGTGACGTCACAAACGAAA
ATGTTTATTCTTGCGTCATTCACAAACAAACAATCGGCTTGTGCGCACAG
CTTAGAACGCATCGGAAAACCACAACACACTTCTCGTCAACTTACGTCAC
AATAGTTTTCATTGTTCGGACTGTACCAAATCTCAAACGTCAACCGTCAG
TGCAGTATGAACTACTTGCAGTCGTCCCGAACATTAAAAGGCCGCTGTAT
TTGACATTCTTACGGTATTGGTGAGGTAATTTTGAAAAATAACGACGTTT
AAAGATGGTTGGAATGGACATGGACCCGTTTGAAGAGCCGATGGACTGGT
CATACCTCCCCGCCGAAATCGTGGTGCAGGTGCTGTCGTATTTAAATGAG
CAGGATCGGGCGAGCGCCGCGGTCACGTGTTCCCGCTGGCACGGGCTACA
CTCCCACCCCTCTCTGTGGAGACACCGTACTTTTAACCCTGGAAACACCG
CAGAATTTCACAGGTACTTTTTATTATTCCTTGGTGTTTTTTTGTTGAGT
TTCTTCTTTTTGACCGAACAAATATGTAAGGTCAATGACCCGGGTCAGTC
GGCTGTCACCATGGTTACTGGAGGTGTAACGGACACCCTGTGGTGTTTGA
ATACATAATGTAGCAAGTGGCAGAGCAGTTGCAGGGTACCATTTAAAGAT
GTATAACATGAATGTTTTAGAGTAAGAATACGTAGAGCAGTAGTTTGTTA
GGCAAGACAATGTAAAGGTTAACATTATGTATTTGCTTGCGGACGGAAAA
AAGTATAAAAGGGTACCAGATTTGCTTCCTTTTGGATTTGTGTCAATGTT
TTATGTTTGGTTCGTTCGAATTCGTTTTTACCATTTAGGACCTGTGATAT
GCTGAGGCAGTATCCGTTGGGGTTAGCGTTTTATCTGAAAACGTTCGAGG
CAGAGTACCCGGAAACCGCTAGGGGCGCTCATAGGATGCACCATTGCAAG
AGAATACAGGTTCGTGAGGGTTGTTGATGTGAGTGTGCATGTGTGTTTTA
GAGTCATAATAAGTACAATCGCGTTCTAGAACAATGCATGACGACTAGGC
TTTATGAATTATTATGACGGAATTAAGAGCACACAACAAATAAATACAGA
ACAACAACAGCAACAAAGACTTCCAATACGAACGGTCGCGACCGCGATGC
CTTGTGTGTATTCATATGTGCATGTGCAGGTGGTCGTGTATGTGTGGATC
TAGCTGTGTTTTTGCGAGTGTGTAAGTATGTACTCGTGCAAGTGTGTGTG
CCTGTTTTTTTTTTTTGGTTGTGCATTGCCAGATGGCACCTACTACCAAG
AGGGTGAAACTACCTCCAATCGCATTGTTCGATTAAACGTACTAGTGTCT
AAATGTATTAAATAAGGACAACAACAACAACACGTATTTGCCTGGGTAGA
TACTAGTATTATATTGGATTTGTGCAGAATTTGTCATATCATCTACGGAT
CTTGTTTATAAGATGAGTTTCTTATTGTTTCTCGTAGAAAACCATGACAA
CGTTCCTGTCACGGCTCAGGGGCAAAGCACAACTGCGCACGCTCAAACTA
CGTCATTTCGAGCTGCACCGGCGGACATGGCAAAACAGGTGACTGACGGT
GATACGTTTTATTTGGAAACCAAATTTGTCAAGGTTTATACCTTGTCTTG
ACGAATCTTTACGTCAGTGCAAAGTGAACTAACGTTTCTAGACAGTGTTT
ACTAATAGTTAGTAGTTGAAAATGGGGACGGCAATACAAGTTCTCATGAC
TTTGACTAGAATTATGCCTATTTTTGTTAAAAATAATAAACATGTGTGAT
GCTACATATAGTTATCGATCATTTCTTTTACTACTTCAAGAACCACGGAA
TCTGAGATGATGGAAACGCTTATTTTCCAATAACAACATTAGCCTACGTA
TTAGTATAATTACTTCACCACAAAGAGAGTATAGTTTTTACTTTCTCTCC
CCCTCTCTCTTTGCACTGCAGTTTCTGCATATTTTCCCAGAGGGCGCTTA
CGCTTAACCTGATTTGAATCCTGCAGGAGTGCAGACCTGGTGCGGTCCAT
CGCGTGGTTCCTGCGCAGTCAGGCTCGGCTCCGCTGGGTGGAGCTGCAGG
GCATGAACGCCACCCCGGAGCACGGACTGCGCATGCTCAACAGTCTGTTC
AGGCGCAGTGGGGCCAACATCCGGGTTCTAAACATACAGGACTACTTCTG
TTCAGGTATATAATCATCATCATCATCATCATCATCATCATAAATTAAGA
TAAACTTTAGATACAAATAGACGTATTGATCAAGCAATTTCATTTTGTTT
CACTAAGGTTTTATTGATTTTCATTATATGGATGACATCATCTGGGAACC
CTTAAACTGACGGTAGCGTTCAAATAAAAAAAGATGGTCAAAAGGAGTTG
CCTTCATTATGTAATCCAAGTGGTCAGGAAGGTTGAACAAAGGACTGAAT
GACAGAACACCATGGTATCCCAAGCAATAAATACATTTTTGACAAGGAGT
AAATTTACGTCAAAGGTACGTTTTAAGATATGAAAAGATGCATTCTACGA
CATTATCATCCGTCTCCAATATTTTGTTTGAAAGTTACCGTAACGGCTCA
TTTTGTAGCTTCTTTGTATCACTCACTATATATCAGCTAACGTTTTTAAT
TTTTTTCAAACGGACGGAAATTGATGCGCTTACTAATGTTATTCATATAA
TCAAGGCAGTATGTCTGTGTTCTGTATACACATATGTAGGCACCGCACAT
ATATGGATAAGAGATAGGCATCAGGACAAGAAAAAATCATCCCTTTAAAT
ATCAGACTTATCAGCCTAGGATTGATGTGCTCAAAATTTCGTAATTACCT
AGAACGATCGTAGAGTGGAACTAGTTGCCACTAAATTTCGTAGAAGCATC
CTCATCAGACAGCTTTAAACAATGCATGCAGTTAGATATGCGAAGGTTAT
AACATGACTGGTCGTTCGGCCGCGTGCCTACAAAACTGGTATGATATGCC
GAAGGACGGTTATACCGGCTAATAATAGTATATAGATACAGATACATATA
CAGAAGAGTAGGGGTCCTTCCTGGTGTGAGTGGATCAAATTCGCATGTTC
CCTGTTCTACATTTTGTAAAACAATGTTCACCTCAATGTGCTTTACAGGT
TATGCCATATCCATGCAAACAAATGCAAACAAATAGCGGTCAGCATCATA
TTAAGTACAATCGCATTCTAGAACAATGACGACTAGTTCTTGTGATTTTA
TTTTGAAGCAATAAAAGCACACAAAAACGTTATCTACAGTATAAAACCAA
CATTTTGTAACACGTACCCCTTCCCCCAATTCTGTAGCCCAAGCCATCTA
CGCACTACCCGAGTTCCATCAGCTCTTCAAGCGGTTGCGCCACCTGTCGG
TTCTGTACCTGAACTACAACTGCGTGTCTGACGAGCTGCTGACGACTTTG
GCTGAGACTTGCGGAGGAAGTCTCACGGATCTGAACATCAAGTACGTAGT
AGTTAAGTCATACATAGCCTGAGGCGTCGCCAAAAACAAACAATGGCAAA
ACGTACGTAGACGTATGTCAACTCAAGTCCGGTCAAGTCAAAGCCTTTAT
TTAGGCCATCGAGAATGTATTAAGATTTGTCTTGACTTGACACGCATCTA
CAGTTTGCTCGTGTGTTTTTGGCAACGAGGCAAGGGCGGAGCATATCTTT
ACTTGAAGACAAACACTTTTTAGTTTAGATAACTTTATTGAGAATGTATG
GTACATACCTTCGTTGCACTGACACAGTTACGTTATTATTGTGGTCAAAG
CACCGTGTTCCTGTAAATAAATAAAGATTAAAAAAACACACAAAGAAACA
GACAACACAACAAGTAAATAAAGAAATAGATAAACATACGGAAACGACTA
TCAAGGAATTTACTGATAAAAGTGTAATCGTCACCATTGCATTATGATAT
GTGAGAATGATATAAAGAAGAGAACCTTTAATTATCTTTTATCAAAATGC
TCAATACATGGAGACATTTTTATTCTAGTCATCAGGTTCACAGACATTCT
ACACGTAATACAAGTAGGGGAATTTTCACTGATATTTACTTTACAAACGC
ATGGTGGTATTAGGGGCTGAACCCACTATTGTAGTATTATTTATGCTTTT
ATCGCTGTGTGGCCCAAGAGCAAGGGGAACGTAGATAGTCGCCGTCTTAA
ACACCATATGGTGTCAGGAGGGCTTAAACTATAACTAAATCTAATTCATG
ATACCTGCAGTTTTACTTTACGTTGAATGGTCGTTCTCTGTGCCGTTCAT
CAACAGGGTGTTCCACATGGATCCACACTTCCAACGCATCTGGAGTATGT
CGTGGTACTCCCTGCGCTGCGCATGCGCAAATCTGAAGGTCACGTTCACC
TTCGAGCGCGTGCTGCTCCACCAAGACGTGAAACAGTGCCTCCTTCCCGA
CATGCCGCTCACAAACCTGGAGGTGAGACTGTTAACAGATTTCTTGGAAG
GATGGTATGTAAAATAGGCTCCGCCCCTGAGGCGTCAACAAAAAAGATCT
AGATATTCGTTGTAGTCCTATCTTTAGGATCCGCCCCAGAGGCGTGGACA
AAAAAGTGATAAGCATATCATTTGGAGTCCGATCTTTTAGAATCCATTCC
TGATGAGTTGACAAAAAAGATCCATAGATATTGATTGTAGTCTGACCTTG
TAGATGCTACAGCCGAAGAATAGCTAGCATATTTTGCGACGCCTCAGGCG
CGGGGCGAGGTCGGACAGTACCTTATTTAGGTAACAAAACGTTAAAACAA
CAGCACATTCGTTATCTATCTCCCAACACAGCTGACGTGCACCAACGATT
ACGTGGTGCACAGAGACTGGGTGTTGTCGCCGACGGTCCGCTATGTGGAG
CAGTACTTCAGACAGACGCTACAGGAGCTCAGCATCGATCTGCTGAACGC
GGACGATGACCTGTGTGAACCCCTACTCCAGGTAACGTCCCTACTTTGTA
TGCTAAAGCGGGTATCTCACTAGACCCCGCGCCTGCTTGCGAATGACATT
CTCTTACTGGCGCAAACAACCGCGAATTGACGCCATTTTGTCGCCAATCG
GCGCCAATCTGTCGCCTGAATTGGCGATTTAAAAAAAAATTCTAAGTAAT
CGCAACTGGCAAATGGGCGCGAATGAGCACCAAAGGCGAAAGCTATAGGG
CGTATTCACGTGACGTCATCACCCCTGCCCTCCGTGGGCGGCCATGTTGG
TGCTCACCCGGCAGCGAAGTTTTTTCGGTGTCCGACGGTCTCTAAAATTC
CAAGGAATGCAAAGTCGTCTGATCGCTGTTTTATTATATGCAAAGAGTCT
CCAGCCTCACATCCTTTTCGCTACAAAAATCCAATTTCACCAACTGGAAA
TGACCCATTATTGACGAGCGAGGAAATGTTTTCCCCAGCTGCCTACAAAC
ATGGCCGCTAAACTGTTTACAGAGTACGCATAAAATCAGTTCACAGCATA
CAAGTGTTACAAGGCCTGCAACCACGTATTACAGTGTCTTGAGTGTCGTG
AAAAATTTTGTTGACAGGGAGTACGTTATGATCGGGAAAGTTCGACGTTG
AAAGACCCGCCAGTTTACGAACGTATCTCAACAAGGAGGTTTCAGATCTC
AAGCAACGACTACACGGTGCCGCGACTGTGTTACACAACGGGCCTGTAAT
TTGCTTTTCGACCAGATACAAAGGTTTCCATACACTCACGTTGATTCTCA
AACTTCAACTATTTAGATCCGCTGTTCGTATGTCAGAAATTCACTTTTGT
TTCAGTCGTTAGTCCCTTCGTATGTTCCCTTACCTACACGAGAAACGCCA
AACCAATCTTACTGTTACCCGATCAGTGTGTGCTTTATCAGTCCCAATCA
AACATCTGACCACGAGGCAAAACACCATGATTGTGAGACAAAACGTTCCG
AAGGGAAATTGTGAATGGCGTAGAAAACATCTGCTATTTATACGGAGAGT
TCCATAGGGCTCCACTATCAAGTGAACACCAACATGGCCGCCAGTGCTCG
TTGCTAGAGGGAGGGTCACGTGACTGAATACGCCCTATTCTGTAATAAGT
AATATGTCAGTTTATTAAGTACTATAAACGATGTCTTTCTAATAACTTAT
GGACGTAATATGGAGCGTTGCACATTCATTCTGAATGTGTAAAATCATCG
TACAGCCAGAAAGCGTCATATAATCTATCTAACAAGCACGTGCATACAAC
AACGTAATAGGCGAGGGTACACATTCATTTTGCTTTGTAACATTGTAATG
TAGTACTGATCATAAGCTGTTAACGTTGTTGTACATGTAAAGGAAAACCC
AACTTGATGACAACGGCTTTCAGACTAAAATCTGCATATTTCCGCATCCC
CACAGCTGATCCAGTCGTGTAAGAAACTGTGGTCGTTAGAAATCAGGACA
TGGATGAGAACGGCGTTCGTGGACTCCGTCTGTCAACTTAAAAAGGAAGG
TAGGAACAACATCTCTCTTTCTCTCTCTCTCTCTCCCTCTCTCTCTGAGT
CTCTCTCTCTCTCTATATCTCTGTCATGTGTCAACCTAACGGTCAAGTTC
ATTGACTGTATTTTTACATTGCTTACGGGTACACCACAGTGGATAAGAAT
ATTCTTTATTCACAATCAGGATCTATATACAATGAACAGCCGACGTTTCG
GTGACCGTTTGTCACCTTCCTCGGGGCAATATGACAAAACCTTACGTTTG
GGACCGAATATATGACGATGCTTCACGTTTGAGGCCACATTGTTAGCAGC
GACGCCTATCTCCAGTGTGGAAAATTGCAGGCCAGTATTGCCCTGAGGAA
GTTGACAGACGGTCACCGAAACATCGGCTGTTGTTTGTGAATGCACTTGT
TATCCAGTGAATTTCCAACCTAAAGAAATTATTCACAGAGGAGTGCACCA
CACAATCAGTGTAGTATTGTCCATGGCATGCAGATTTTTCGCTCAGAAGA
ACCCCTTGAATGTAACGTTAACATGCGTGGTAGACATTCGTAAATATTCC
GCCATTTTTTTCCTCAGGTAAAACTATCCTGACGACCTTCAAAGCGGTGC
TGGTGACTCACATGGACGAGGAGACCCGCCAGGAACTAGAGGTGGTGCGC
AACAAACACAAGGACATGATACGGGAGGGTCTACTGAACTACAACTTCCA
TGTAGAGTGGAACCCGTACTTGTAAACTGCGTATCGCAGGTGGACCGCTA
GACGGCGCTCATGATACATGACATTGCAGAAGTTGCGTCAACATACATAT
ACCAATACGCTGGAAACCAACTTATTTATTTGATTACTCAACGTCTGAAA
CTAACTTAATGCAAGAACGTGATACGGGAGGACTGTTAGACCGTATAATG
G Coding sequence (CDS) from alignment at Sc0000026:1270851..1278351+ >Blg00085.1 ID=Blg00085.1|Name=Blg00085.1|organism=Branchiostoma lanceolatum|type=CDS|length=1347bp|location=Sequence derived from alignment at Sc0000026:1270851..1278351+ (Branchiostoma lanceolatum) ATGGTTGGAATGGACATGGACCCGTTTGAAGAGCCGATGGACTGGTCATA CCTCCCCGCCGAAATCGTGGTGCAGGTGCTGTCGTATTTAAATGAGCAGG ATCGGGCGAGCGCCGCGGTCACGTGTTCCCGCTGGCACGGGCTACACTCC CACCCCTCTCTGTGGAGACACCGTACTTTTAACCCTGGAAACACCGCAGA ATTTCACAGGACCTGTGATATGCTGAGGCAGTATCCGTTGGGGTTAGCGT TTTATCTGAAAACGTTCGAGGCAGAGTACCCGGAAACCGCTAGGGGCGCT CATAGGATGCACCATTGCAAGAGAATACAGAAAACCATGACAACGTTCCT GTCACGGCTCAGGGGCAAAGCACAACTGCGCACGCTCAAACTACGTCATT TCGAGCTGCACCGGCGGACATGGCAAAACAGGAGTGCAGACCTGGTGCGG TCCATCGCGTGGTTCCTGCGCAGTCAGGCTCGGCTCCGCTGGGTGGAGCT GCAGGGCATGAACGCCACCCCGGAGCACGGACTGCGCATGCTCAACAGTC TGTTCAGGCGCAGTGGGGCCAACATCCGGGTTCTAAACATACAGGACTAC TTCTGTTCAGCCCAAGCCATCTACGCACTACCCGAGTTCCATCAGCTCTT CAAGCGGTTGCGCCACCTGTCGGTTCTGTACCTGAACTACAACTGCGTGT CTGACGAGCTGCTGACGACTTTGGCTGAGACTTGCGGAGGAAGTCTCACG GATCTGAACATCAAGTACGTAGTAGTTAAGGTGTTCCACATGGATCCACA CTTCCAACGCATCTGGAGTATGTCGTGGTACTCCCTGCGCTGCGCATGCG CAAATCTGAAGGTCACGTTCACCTTCGAGCGCGTGCTGCTCCACCAAGAC GTGAAACAGTGCCTCCTTCCCGACATGCCGCTCACAAACCTGGAGCTGAC GTGCACCAACGATTACGTGGTGCACAGAGACTGGGTGTTGTCGCCGACGG TCCGCTATGTGGAGCAGTACTTCAGACAGACGCTACAGGAGCTCAGCATC GATCTGCTGAACGCGGACGATGACCTGTGTGAACCCCTACTCCAGCTGAT CCAGTCGTGTAAGAAACTGTGGTCGTTAGAAATCAGGACATGGATGAGAA CGGCGTTCGTGGACTCCGTCTGTCAACTTAAAAAGGAAGGTAAAACTATC CTGACGACCTTCAAAGCGGTGCTGGTGACTCACATGGACGAGGAGACCCG CCAGGAACTAGAGGTGGTGCGCAACAAACACAAGGACATGATACGGGAGG GTCTACTGAACTACAACTTCCATGTAGAGTGGAACCCGTACTTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg00085.1-exon-Sc0000026-1570713199:1270851..1271413 | Blg00085.1-exon-Sc0000026-1570713199:1270851..1271413 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1271789..1271909 | Blg00085.1-exon-Sc0000026-1570713199:1271789..1271909 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1272438..1272538 | Blg00085.1-exon-Sc0000026-1570713199:1272438..1272538 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1272977..1273155 | Blg00085.1-exon-Sc0000026-1570713199:1272977..1273155 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1274288..1274456 | Blg00085.1-exon-Sc0000026-1570713199:1274288..1274456 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1275257..1275422 | Blg00085.1-exon-Sc0000026-1570713199:1275257..1275422 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1275782..1275931 | Blg00085.1-exon-Sc0000026-1570713199:1275782..1275931 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1277356..1277449 | Blg00085.1-exon-Sc0000026-1570713199:1277356..1277449 | Branchiostoma lanceolatum | exon |
Blg00085.1-exon-Sc0000026-1570713199:1278018..1278351 | Blg00085.1-exon-Sc0000026-1570713199:1278018..1278351 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000026 | genome | Sc0000026:1270851..1278351 + |
Properties
Property Name | Value |
GeneID | Blg00085 |
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