TCONS_00054001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054001
Unique NameTCONS_00054001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length96

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054001 ID=TCONS_00054001|Name=TCONS_00054001|organism=Clytia hemisphaerica|type=transcript|length=96bp
CTAAGAAAGCTGCCTCTTAGATCGCATTATTCGACGGAAGATGACTTCgg
tgagatacatctttggttaacGTTTGAAGGGAATTGGATGAACCAG
Run BLAST on NCBI

transcript from alignment at scaffold_237:268479..268574

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054001 ID=TCONS_00054001|Name=TCONS_00054001|organism=Clytia hemisphaerica|type=transcript|length=96bp|location=Sequence derived from alignment at scaffold_237:268479..268574 (Clytia hemisphaerica)
CTGGTTCATCCAATTCCCTTCAAACgttaaccaaagatgtatctcaccGA
AGTCATCTTCCGTCGAATAATGCGATCTAAGAGGCAGCTTTCTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034086XLOC_034086Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054001-exon-scaffold_237-1491911889:268479..268574TCONS_00054001-exon-scaffold_237-1491911889:268479..268574Clytia hemisphaericaexon
TCONS_00054001-exon-scaffold_237-1510915933:268479..268574TCONS_00054001-exon-scaffold_237-1510915933:268479..268574Clytia hemisphaericaexon
TCONS_00054001-exon-scaffold_237-1575043694:268479..268574TCONS_00054001-exon-scaffold_237-1575043694:268479..268574Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:268479..268574 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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