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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000020:852374..860509+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03299.0 ID=Blg03299.0|Name=Blg03299.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8136bp|location=Sequence derived from alignment at Sc0000020:852374..860509+ (Branchiostoma lanceolatum)
ACTGACTCTTGGCAACACGAGCACGTTCTCTCTCGATCGATTTGTTATCA
GTATGACAGGAGAAAGCTTCTCGGGACAGATGAGCGGATCGCCGGACGAC
AACCTGCCACTGCACCGCTACGACACCGAGGGCATGCCGCAGGACAACCC
GCCTCAGACCGACAGCTTCCCGCCTGCAGACCACAGCGGACTCGGCACCA
CGTCTCCCTCGGACAAGGCCCAGTCCGACACCGAGAAGAACACCGAGGCA
ACCAGTGCCAACCGTCGGCGCAGGAAGCAGAGACCCGCCGGCAAGCCTCC
CTACAGCTACGTGGCCCTCATCACCATGGCCATCGTCAACTCCCCTGAGC
GGAAAACCACCTTGGCGGGCATCTACAAGTTCATCATGGACCACTTCCCC
TACTACCGGGAGGCCGACAAGAAGTGGCAGAACTCCATCCGCCACAACCT
GACGCTGAACGACTGTTTCGTCAAGCTGGCCCGGCATCCCAACCGTCCCG
GCAAGGGCAGTCTGTGGGCGCTGGATCCCGGGGCAGAGGGCATGTTCGAC
AACGGCTCCTACCTCAGGAGAAGGAGCAGGTGAGAAAGAATCCTGAAAAT
TTATTGCTGTAATATGTTTGATTTGTCCTTGCAAGATAAGCTCTTTATAG
CTTTTCTGTAACAGCATCTGTGTATTTGTTTCTAACATCTAGGTGGACGA
ATCACAACTTTTACGTTTATTGTAAATCCAATACATTGTTTATGTTAGGA
ATTCGGTGGTTACATTACGAATTTCTGACAGTCATACTAAATGCAATGTT
TGCTTGTTTTCCCCAGGTACAAGAAATCGCACCAGACCAGAAACAACCTC
CTGCCCGCCGGATACCCGCCCCAGGTCCCCGTGCAGTCCTACCCACCGCC
GCCCTACCCCAACATGGCCCCCGTCACCGGCACCACCCCGCTCTTCCTCT
CCACGTCCTACCAACAGACGACCTCGGCCCAGCCCTCGGGACACCTCGGC
ACGTCGTACCGAGGGTCTCCGTCCAGTACCGGCGTGATGTCGGCCAGCCC
GGACAGCTCGTCAACAGACGGCAGCGTGAGTGGAGGGTCATCACCGGGCG
GACAGACGATAGGTAAGGACACGCTACGATTGCTTAAAATTTTCATCAAA
ACAACTTTGTGATTTTCATGGCTATATCATTTCTTGTTTCAATTGTTCTG
ACATGATCATAGTAACTATTTTCCGTACAGATTCAATAAACTTTAATTCC
TTTATAGAGGTATAGGAGGGATCTAATCGCTATGTCTCACTGCACATTAT
AGCAGCGTATAAGCATTATTGACACAAATGGCTGATCGTGTCTCTCCCCA
TCTTCCAGGATTGTCTCCAGTTGACGTCAGCACCTTCCAGCAAGGGCTCC
TCGCCACTGCGTCACCTAGCGGCTTCAACAGCAGACCCACCCCCTTCACC
AGCACAGCGGCCGCCGTCACGTCCTACTCCGCCCCGTCCAACACCAACCC
CGCCATCCTCTACCAGAGATCGACCCCGCAGACACAACCGATCACCAACA
GCACGTCCTACGGGCCGCCTCAAAACATGTACCGACCGCCTCCCTTCACA
GCCGCCGGTACCGGGAACAGCTACCCGCAGACGGGGATGTACAACGGCTA
CTCCGCGCCTCAGGGAAACAACGGCTACTACAACATGAACTCTTTGTCTC
ACTTCCACGGTGGTAACATGGAGATGTACGCTTACTATCTGTAAATGATA
CGTTTGTCACATACTGCGTCGAGTTGCTGATTTGTAGATGAGTAAATTGT
AATTTCTAGAAGTCTGATAACAGTAAATACACGAATAACGATTCCAATGA
TAAAGTACAGTGTGTTCATTTAACTGGCTTCCTCTGTTATCTATTTTCTG
ATTGTGACTGTAGCCACGCACCATGTAATGGTTGTTCTGCTTATGTCACC
ATTCCTAGACGCCTTTTGTAAATGTTCTATATATGATGTAAATGAGAGGA
AGTTTATATAGATATTTGTGTTTTGTGGTTTCGACACACGTCAGGGAATG
GATGACGAATCGCCTGGTAGTGATATCCTTCTTGTACAACTGTGAATAAA
ACAATTGACGAACTTTGAAATCGCTTGTGTTGTGTGGTAAGCTATAGTAT
GGTATGAAAAGATCCAAATTGTCAGATTGAGTACTTTCGATTTTTCAATA
CCTTATTAAATAGTAAAGTTTATAATCAGACTACGCAAAGCGGGGAGTTG
GGTGATAGTTTCAGTCAACAGTGCTGGCACCATTAATTTCCTCTCTCAAT
GCAGAACCTTGGGCATAAACAAACTGACAACATTTGGTATACTAAGTGCT
GTATCTAATACCAGCTCAGAACAGAACGAGGTCACACACCGGGAGGCCAA
AATCGACATTGACCTTGGTCTTGGCAACACCCTCTTACCAAATATCATCA
CAATCCAAAGCTTAAGCTGACCACAAATATTTGGAAAGGTGGACATACAG
GCAGACCCGAAACAATTCTACTTATCACAAAAAGATTTTCTAACTCGGAA
TTTTATGTGGTGTTCAGATAGTTTAAAACAATGTTAAATGTTTGCAGCTA
GAGCAAAGGTTATACATATACAGGTATGGCTATACATATACAGGTATGGG
TGATGTACGTACCGACTACTAAGTATCTAATTATACGAGCCCAGAAAAAG
AACAATCTGTCATCACGTTACGCACCGCCCGATAATGCGATTATGATAAC
ACAGCTGAAAGAACTGACAAAGTTGATGACGAGATATCAGCACCAAGGAC
ATGGCCATGCGCTCCGTCCAGCACATCCAGCAAGACAATGGTTTTGGACC
GCTTTCCTGTTCCCTCCTCTTAGTATGGTGGGCCGAGGACCTTTCTTTCT
TGTGTGATTAGGCCTCATGGACTAGATTTTGTGGATAGCATCCCAAAATT
CAAGCGAACAGGCTAAAAAAACGATGCATAGTTTCTAATTTCCTCAGATG
TAAGTGGGGAGGAAGGTTTTCCGTATACAAATGCACCTGACTTTGGGTTA
AATTGCCTCAGCTGTCTTTTCAACAATAATCCTACATACAGACCCACTTC
TAATGTGCTTGCATGGCCAAATTAGGGCACAATCTCTCGCCAACGGTAGA
CGGGATAAGCTTAATGAAAGCAGTCGAGTGACTATCACACATTCAGGAAG
GTACACAAAAGCGTTTGAAGACTATCCCCTATTGGTATACAGAGATTTTG
GTACTTTTATAATTCATATAAGGAATCGGTGTATTCTATATAAACATGTC
CCTTTTTGAAGTTCTCCTTTTTATCACCTGATAAAAGAATAAACAGGCAA
AAGACTTATATGTTCATCATATCAGGTTAACTGTCTTCATAACCTTTTTG
TGCCTGACTGCTTGTTCTCTTCTGTTCAATTTAGGGACGTCCAGAGGTTG
CCATCCACAAAATGTAGTCAACGAGGCCTAATCGCACAAAAAATACATGT
TAAGGTTATTTGACCGTCATACTAAGGCCATGTTGATTTGATCATACGGA
TGACATCGGCGCGCGTATCAATTTTCGCCCGTTTCCAACAAAAGTTTTTG
GCCATACTGTAAATCGTATACAAAGTAGCTGCAAAATGAGAAAATATATG
CTATAGACAAAAAAAATGGAAAACGGATACTAATTTAGAATGCCGAAGTC
GATTCTAAAGTCAACGAAGAAAATGTAAATGAAGAAAAATTAAGAATCTA
TTATTCGGTGTACCATACTGTGTGTTAACTTTTGTTCACATTTCCTGGCC
ACGTAAATTTCATGTTAACATGTTGAAGGCAACTTTTTGGGGTTCCCAGA
GGATGTCATCCCTGTAATGAAATCAACATGGCCTAAGTGGAGGGAACGGG
AAAGTGGTCCAAAACCAGTGTATCTGTATGTGCTAGACGGAGCACATGGC
CCTGTCCTTGGTGCTGATATCTCGCCATGAACTTTGTCTGTGTTATCATA
ATTGCATTATCGGCGGTGCGTAACGTAGTAGGTTGTTCTTTCTCTGGGCT
GGCATAATAAGTACTTAGTAGTTGGTGCGTCCGCCAAATATAGCTGTGTG
TGAATATAGCGCTGCCGCGAACCTAAAACCGCCGACAACACCCCATGTCA
TCCTTAACGCGAAATCAAATCCCCGCAAACTTAAATCCATTCACAGTAAT
AAGACAGTGAACAGGTAGAGACCAATTTTTATTGAGTACAGCATACCGTC
GGCGAAATCGTAATACCGCCTTTGGTAGGCGTGCGTCACATACGATCGCT
ATCAACGTGACCGTCAATGGAGACTACCTTCTTTGTTAATGAAAACAATT
TTAAACATATTGGCGGTATTGTGCCTCTACAACGACAGCTATCGTTTGTA
TCGCGTCTGCCGATTTTAGCGCACCTTTTTAGTCAACTTGTCCACGATGT
TTGAACAAATTTGGTGCAGTTATTCGGCATTGGCGCCGTACGTAGATATG
CGGAGTCACTAACAATGGAGTGCATGGGAACAGGTTTGGGATTTTGGGGT
TCAGTGCAATTGAATGGAATGTATGTCAATCAGTTAAGCAATTAAGTGAA
TTCTACTGTATTATATACAGTACTTAGTGCATGTATATTGAATGTTGTCA
GTTTGTTTAAGTCTAAGGTTTTGAATTGAGAGAGGAAATTGTTGACTAAA
ACCACCACGCAACTCCACACATTGCGATATGGGCTGTTTAAAAACTTCAC
CATTAAGAAATAAGCTATTTGAAATATTTCGGACTACTTTATAAAAGTAC
TCGTCAATCCGACTCCAACCCATAGCACACACATGATTACAAAGTACGTC
AATGGGCATTTTATTCACAATTGTACAATATTCATAATCCACTCCTTTGA
CGCGTTGTAAGAGCTAAGAAGTGGAAATTAAACGTTTTTAAACACAAATA
TCTATTTATACTTTCTCTCATTCACATCATATCATAAAGAACATTTACAA
ATGGTGTCTAGTACGAAAGAGGGTGATACGGATTTCTGGTAAAATAATAA
AAACTTTATTGCACAACAATTGTACAAGGTACAAAGTATGGCATTCACTG
GTACATGTACATGGATAACATTCTATTAGGTTAATCATCTAATCTATCTA
GTACAATATGGTGTTGTAGTAGCAGAACAACCATTGTATTGGGTGTGGTT
TCAGTCACTATCAGAAAAAAAATAGTGGAAGCCAGTTAAACGTGCACCCT
ATATCATGGGAACCATTGCAACAATGCGCACTCGTAGTAGAGGGTGTACG
CTGATGATTACCTATCCAGACAGGTGAATCACTTCCGACAATAGCAACAA
CAACCAACTCTTTACCTCCCCGACCAAGCTGTAAAGACGCGCTCCGATTG
TTTACACCTTCGTTTATTACCTGTATTGTTTGTTTCTTTTATGTCGGCAT
GTCACAATAAGAACAATAGACGAAGCGAAGTCTTTAAAAACGCCACGCGC
TAAATTCAAACCACAGTTCGCTACTGACTCTTGACGACAACACGAGTACG
TTCTCCCTCTATCGATTTGTTATCAGTATGACAGGAGAAAGCTTCTCGGG
ACAGATGAGCGGATCGCCGGACGACAACCTGCCCCTGCACCGCTACGACA
CCGAGGGCATGCCGCAGGACAACCCGTCTCAGACCGACAGCTTCCCGCCT
GCAGACCACAGCGGACTCGGCACCACGTCTCCCTCGGACAAGGCCCAGTC
CGACACCGAGAAGAACACCGAGGCAACCAGTGCCAACCGTCGGCGCAGGA
AGCAGAGACCCGCCGGCAAGCCTCCCTACAGCTACGTGGCCCTCATCACC
ATGGCCATCGTCAACTCCCCTGAGCGGAAAACCACCTTGGCGGGCATCTA
CAAGTTCATCATGGACCACTTCCCCTACTACCGGGAGGCCGACAAGAAGT
GGCAGAACTCCATCCGCCACAACCTGACGCTGAACGACTGTTTCGTCAAG
CTGGCCCGGCATCCCAACCGTCCCGGCAAGGGCAGTCTGTGGGCGCTGGA
TCCCGGGGCAGAGGGCATGTTCGACAACGGCTCCTACCTCAGGAGAAGGA
GCAGGTGAGAAAGAATCCTATGACTTATGTTGTTTGGCCTTGCGAAATAA
TGTCTCTGCGACAGCATTTGTGTTTTTGTTTCTATATCTAAGTCGACGAA
TGTATCGTGTATTGTAAATCCAATGCATTATGTGTGTGGCGGTTGCAATA
CGACAGTCATACTAAATGAAATGTTTGTTTATTCATCCAGGTACAAGAAA
TCGCACCAGACCAGAAACAACCTCCTGCCCGCCGGATACCCGCCCCAGGT
CCCCGTGCAGTCCTACCCACCGCCGCCCTACCCCAACATGGCCCCCGTCA
CCGGCACCACCCCGCTCTTCCTCTCCACGTCCTACCCACAGACGACCTCG
GCCCAGCCCTCGGGACACCTCGGCACGTCGTACCGAGGGTCTCCGTCCAG
TACCGGCGTGATGTCGGCCAGTCCGGACAGCTCGTCAACAGACGGTAGCG
TGAGTGGAGGGTCATCACCGGGCGGACAGACGTTAGGTAANTCTCCGTCC
AGTACCGGCGTGATGTCGGCCAGTCCGGACAGCTCGTCAACAGACGGTAG
CGTGAGTGGAGGGTCATCACCGGACGGACAGACGTTAGGTAAGGACACGC
TACGATTGCTTAAAATTCAATTAATCTAAACTAGTAGTACTTCTCTTAAT
GTGTGATCTGCGTTCTTTCTGCGTTTGTCATTTTTTGTGGCTATTATATT
TTGATATGGCCATAGCAACTATTTCACGCACTGTTATCCCTGTATAGTAG
AGTGGGGGCGATCTAATCGCTATGCCTCACCCTGTATGCAGTATTGACAA
ATGTCTGATCGCGTGTTTCTCTCTCTCCATCTTCAGGATTGTCTCCGGTT
GACGTCAGCACCTTCCAGCAAGGGCTCCTCACCACTGCGCCACCTAGCGG
CTTCAACAGCAGACCCACCCCCTTCACCAGCACAGCGGCCGCCGCCGCAT
CCTCCTCCTCCCCGTCTAACACCAACCCCGCCATCCTCTACCAGAGACCG
GCCCCGCAGACACAACCGATCACCAGCAGCACGTCCTACGGGCCGCCTCA
CAACATGTACCGACCGCCTCCCTTCACAGCCGCCGGTACCGGGAACAGCT
ACCCGCAGACGGGGATGTACAACGGCTACTCCGCGCCTCAGGGAAACAAC
GGCTACTACAACATGAACTCTTTGTCTCACTTCCACGGTGGTAACATGGA
GATGTACGCTAACTGTCTGTAGATGATACATTTGTCGTATTACATATTGT
AAGATACGGGTGAGAGTTNGATGTACGCTAACTGTCTGTAGATCATACAT
TTGTCGTATTACATATTGTAAGATACGGGTGAGAGTTACTTATTTGTAGA
TGACTAGAGGTCTGCCAACATAGTAAATCGCCCTCTACTACCTGTGTGCA
TTAATATTGCAATGATTCCCGTTATTTAGTACAGTGTGTGTGTACTATTA
ACTGGCTTCCTGTATCTATCTTCTGATTGTGACTGTAGCCACGCCCCATG
TAATGGTTGTTCTGCTTATGTCAGCAATCTGTATCACGCCATTTGTAAAT
GTTCTGTATCATATGATGTAAGTGAGAGTAAGTTTATATAGATCTTTGTG
ATTTCGACACACGCCATGGAATGGATGACGAATCGCCTGATAGTGATATT
CTTCTTGAACAATTGTGAATAAAACACCAATTGATGAACTTGGAAATCGT
GTGTGCTATGCTATGGTATGAAAAGATCCAAATAGTCCCATTGACGAGTA
CATCCATAAAGTAGTCCGATTTTCCAATACATTATTTCTCGATGGGGAAG
TTTTAGTCTTCATCGAAAAGTGTGGAGTTGGGTGGTAGTTTCACTCAACA
ATTTCCCTTGCTTGCACTATTAATTTCCTCTCTCAATGCAAAATCTTAGG
CATAAACAAACTGACAACATTCAATATACTATATCTAATACCAGCTCAGA
ACAGAACACCAAGGGACCCCAAATCGACCATGACCCGACCAACATCTGCC
CTCATACCAAATAACATCACAATCCATATCTGGTAA Coding sequence (CDS) from alignment at Sc0000020:852374..860509+ >Blg03299.0 ID=Blg03299.0|Name=Blg03299.0|organism=Branchiostoma lanceolatum|type=CDS|length=1209bp|location=Sequence derived from alignment at Sc0000020:852374..860509+ (Branchiostoma lanceolatum)
ATGACAGGAGAAAGCTTCTCGGGACAGATGAGCGGATCGCCGGACGACAA
CCTGCCACTGCACCGCTACGACACCGAGGGCATGCCGCAGGACAACCCGC
CTCAGACCGACAGCTTCCCGCCTGCAGACCACAGCGGACTCGGCACCACG
TCTCCCTCGGACAAGGCCCAGTCCGACACCGAGAAGAACACCGAGGCAAC
CAGTGCCAACCGTCGGCGCAGGAAGCAGAGACCCGCCGGCAAGCCTCCCT
ACAGCTACGTGGCCCTCATCACCATGGCCATCGTCAACTCCCCTGAGCGG
AAAACCACCTTGGCGGGCATCTACAAGTTCATCATGGACCACTTCCCCTA
CTACCGGGAGGCCGACAAGAAGTGGCAGAACTCCATCCGCCACAACCTGA
CGCTGAACGACTGTTTCGTCAAGCTGGCCCGGCATCCCAACCGTCCCGGC
AAGGGCAGTCTGTGGGCGCTGGATCCCGGGGCAGAGGGCATGTTCGACAA
CGGCTCCTACCTCAGGAGAAGGAGCAGGTACAAGAAATCGCACCAGACCA
GAAACAACCTCCTGCCCGCCGGATACCCGCCCCAGGTCCCCGTGCAGTCC
TACCCACCGCCGCCCTACCCCAACATGGCCCCCGTCACCGGCACCACCCC
GCTCTTCCTCTCCACGTCCTACCCACAGACGACCTCGGCCCAGCCCTCGG
GACACCTCGGCACGTCGTACCGAGGGTCTCCGTCCAGTACCGGCGTGATG
TCGGCCAGTCCGGACAGCTCGTCAACAGACGGTAGCGTGAGTGGAGGGTC
ATCACCGGGCGGACAGACGTTAGGATTGTCTCCGGTTGACGTCAGCACCT
TCCAGCAAGGGCTCCTCACCACTGCGCCACCTAGCGGCTTCAACAGCAGA
CCCACCCCCTTCACCAGCACAGCGGCCGCCGCCGCATCCTCCTCCTCCCC
GTCTAACACCAACCCCGCCATCCTCTACCAGAGACCGGCCCCGCAGACAC
AACCGATCACCAGCAGCACGTCCTACGGGCCGCCTCACAACATGTACCGA
CCGCCTCCCTTCACAGCCGCCGGTACCGGGAACAGCTACCCGCAGACGGG
GATGTACAACGGCTACTCCGCGCCTCAGGGAAACAACGGCTACTACAACA
TGAACTCTTTGTCTCACTTCCACGGTGGTAACATGGAGATGTACGCTAAC
TGTCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03299.0-exon-Sc0000020-1570713199:852374..852952 | Blg03299.0-exon-Sc0000020-1570713199:852374..852952 | Branchiostoma lanceolatum | exon |
| Blg03299.0-exon-Sc0000020-1570713199:853190..853247 | Blg03299.0-exon-Sc0000020-1570713199:853190..853247 | Branchiostoma lanceolatum | exon |
| Blg03299.0-exon-Sc0000020-1570713199:858722..858959 | Blg03299.0-exon-Sc0000020-1570713199:858722..858959 | Branchiostoma lanceolatum | exon |
| Blg03299.0-exon-Sc0000020-1570713199:859310..859702 | Blg03299.0-exon-Sc0000020-1570713199:859310..859702 | Branchiostoma lanceolatum | exon |
| Blg03299.0-exon-Sc0000020-1570713199:859772..860509 | Blg03299.0-exon-Sc0000020-1570713199:859772..860509 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000020 | genome | Sc0000020:852374..860509 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03299 |
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