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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053814 ID=TCONS_00053814|Name=TCONS_00053814|organism=Clytia hemisphaerica|type=transcript|length=1036bp
ggccattgaagccttatgttcttatatagtttgttcttatagaaaaatgt
gtaCCACCGCTTTTTTTCCGTAAACCGCCTTACGGCTGAAAACTCCACGA
ATTTATATATTCCCCGTTTACAATATCCCTCTAATCGACATTAGCATCAT
CGAGGTACATTGAAGATTGAATTAGAGGGAACCAATTGAACAAAAATCTT
CTCATTTAGTGAAATGCATACAACAGCGGTATTAGTATTCATCGGGTGCA
CCCTGATCACCGGGACATCATGTTTGACCAACATACCCGCATACTGCCAT
AAACCACATGGTCAAACATGTGCTTGGTACCCAGAATGCATCGAGAAACG
TCAAATCTGTCCTGGGAACGATAATTACGCAATGAAATATGCCCATCATT
TTTGCACCAAGTTCGGTCAAGAATACTCAACATTTGGCACCACTGGTCAA
AAATGGGTAGATGCAACTCGCCTTTGCCTGCAACGTGCTTTAGTACCCTA
TCTAGATGACCAAAGTGTTACATGCAAGAATTTGAAGAAAGTAGCTTTCG
ACTCACACGTTTGTTGTTACCTGGGCGGTCCCGCCTGTACACCCTCAAAT
GAAATCCGCCCATCAGTTTGTGACGTTCCAATTAAGGATTGGCTAAGATT
GTTCTGGATCGTCAAAGGGTCATTCAATATTTTCGGACAGCATGCAGAAG
TTGTTGGTTCTTTGAGACAAATTATGGGCGTTCTTAAGGGGTGTGCTAAA
CACCACGTCGGGCGGTAGAACGATGGATATTTTTTATATCATATTTTTTG
CACTAAATagagtctgttcacgataagtctTAGTTTGGGTTTATAGTACC
GATCCCCTTGAGGTTTCCGTGGTTTCCGCGTGGCTGGTATAACTAAAAAG
TTGCAAAACTTGTTGTGAACAGGCTCTAAGTACattataaatatttatat
ttttattgaaataaagaaaaactatttttgaaattcaataagATTTGTTA
GTTGCCAGTGATTTTCGTGGCATTTTTTGGCgaaca Run BLAST on NCBI transcript from alignment at scaffold_234:447236..448271+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053814 ID=TCONS_00053814|Name=TCONS_00053814|organism=Clytia hemisphaerica|type=transcript|length=1036bp|location=Sequence derived from alignment at scaffold_234:447236..448271+ (Clytia hemisphaerica)
ggccattgaagccttatgttcttatatagtttgttcttatagaaaaatgt
gtaCCACCGCTTTTTTTCCGTAAACCGCCTTACGGCTGAAAACTCCACGA
ATTTATATATTCCCCGTTTACAATATCCCTCTAATCGACATTAGCATCAT
CGAGGTACATTGAAGATTGAATTAGAGGGAACCAATTGAACAAAAATCTT
CTCATTTAGTGAAATGCATACAACAGCGGTATTAGTATTCATCGGGTGCA
CCCTGATCACCGGGACATCATGTTTGACCAACATACCCGCATACTGCCAT
AAACCACATGGTCAAACATGTGCTTGGTACCCAGAATGCATCGAGAAACG
TCAAATCTGTCCTGGGAACGATAATTACGCAATGAAATATGCCCATCATT
TTTGCACCAAGTTCGGTCAAGAATACTCAACATTTGGCACCACTGGTCAA
AAATGGGTAGATGCAACTCGCCTTTGCCTGCAACGTGCTTTAGTACCCTA
TCTAGATGACCAAAGTGTTACATGCAAGAATTTGAAGAAAGTAGCTTTCG
ACTCACACGTTTGTTGTTACCTGGGCGGTCCCGCCTGTACACCCTCAAAT
GAAATCCGCCCATCAGTTTGTGACGTTCCAATTAAGGATTGGCTAAGATT
GTTCTGGATCGTCAAAGGGTCATTCAATATTTTCGGACAGCATGCAGAAG
TTGTTGGTTCTTTGAGACAAATTATGGGCGTTCTTAAGGGGTGTGCTAAA
CACCACGTCGGGCGGTAGAACGATGGATATTTTTTATATCATATTTTTTG
CACTAAATagagtctgttcacgataagtctTAGTTTGGGTTTATAGTACC
GATCCCCTTGAGGTTTCCGTGGTTTCCGCGTGGCTGGTATAACTAAAAAG
TTGCAAAACTTGTTGTGAACAGGCTCTAAGTACattataaatatttatat
ttttattgaaataaagaaaaactatttttgaaattcaataagATTTGTTA
GTTGCCAGTGATTTTCGTGGCATTTTTTGGCgaaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053814-exon-scaffold_234-1491911889:447236..448271 | TCONS_00053814-exon-scaffold_234-1491911889:447236..448271 | Clytia hemisphaerica | exon |
| TCONS_00053814-exon-scaffold_234-1510915933:447236..448271 | TCONS_00053814-exon-scaffold_234-1510915933:447236..448271 | Clytia hemisphaerica | exon |
| TCONS_00053814-exon-scaffold_234-1575043694:447236..448271 | TCONS_00053814-exon-scaffold_234-1575043694:447236..448271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_234 | supercontig | scaffold_234:447236..448271 + |
Blast
The following BLAST results are available for this feature:
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