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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053802 ID=TCONS_00053802|Name=TCONS_00053802|organism=Clytia hemisphaerica|type=transcript|length=2817bp
TTTTTCTTCAGTCTCAACAGAAGTTAAATGAGAGACGTCAAGCAGGTCTA
GCAGAGCAACAAAGATGCCACGCTAGAAGAAGAGACATGATGGCAGAGCA
GAATGCATACGAATGTCAAAAAGCATTCGGACAACAGACATCAAATCCGT
CATACCGTTCAGCAAAGGACAAATCAAAGCAAGAGGTTATCCAACGTGAg
gagcaaaaacaaaaacataagaAAGAGCGAGACAATTTgtacgAAGATCA
GAACGAGGATGAATGTATGAGAGCCTACCAACGAGAAATGGCCAAgtcac
aaaacaaaaaacaaaacaacaagcCGTCTAATAATGGCTCAACCACAAAT
ACAAATTCAACGAATGGCTGATAAAATGATATTTAAAACATACAGTTTCA
TATATGAATTCTTATGAAAGTGCGACAGGTTATATAGAATCCCTCTAGAC
TCGTTACCTCATTCGAGCTTGAattattgaatttattttttatggaaaGT
TTAAAACTCTAGCATTGCATAAAATTGTGTTTAAGTGACTGCCAATCGAA
CtactttttgaaatctttttattCGCCCTTCCAATTCTTAGAGCATAATA
GGcttacaaattttcatttcaataagtttgaaaaacaattcaaaattatT
GACTTCACTTTAAAATTGCATTCGGAGCTCATAAGTGTTATTCGAGTTCA
CAAATTTATAAAGGCCCCTTTTAAATCAAGGAATTCTGACCTGACTCGGT
TCTTTTAATCAAGCCTATTTATTCataacccctcaaaatttaaggaTGTT
ATATTATTGTATAATTTTTGTTGTAACCTTATACTTCAATTATTTCAAAA
CCATTTACTGTAAATAACATACACTGctcttgaaattaaattttacaaAC
TTGAAAACACTTTCATCTGCCTTTGAAATGTATTGTTCCCAATTCAACAT
GATGCAGAAGATTATAAAACATATGTACAGtaaacattaaaattttaccA
GCAAAATACACCAATAAAAAACAGTAGAAATATAACCAAATAATTTGAGA
CAATTTATCATTTATGTAACTAAGGATAATCATTATATCAATAGTCCCTT
CTCAGAATACCGTGGAAGGTTTTTCAGCCctgcaaaatcaaaaaatccag
tggggatggttttggagtgcaatttgttccattaaatttcaaaaGGGGTT
agttcaaagtcaatttcccagtggggctgaaattccggggtgttttccca
ccggggacaaaattttggccgAACTGTCCACTGCCGAACTGTCCACTGCC
GAACTGTCCACTGCCGAACAGTGGGGCTTGAGCCTCAGCGAGGCTGTGGC
ACAGGGGTGTGAAGGTTGTGCAGATGAATATCTCGACTGTACCCTCGAAC
AAAATGTTCCTCGGAAGTTCGAAATAGAGTGATTCAACTATCGACTTTTC
CATTACGagattctattattcgaattaaTTCTAGGTGTCATTCAAGGTAA
AATAATCAATAAATAAAATGCTTTCTTTAAAATTGGCATATCGCTGCATC
TTTAACAAATAGCACATCCACGTGAATTCGAATTAGCGTAAGCCAACTGT
AGAAGTGTTGCAGGCCCCTTTAAAACACAAAAGTAAGAATGAAGAAAAAC
CTCTTACCAACAAGTTTGAACCAACCagaaacaatgaaaaaatcaacatt
CGAAATCATCCGTAATAGAGTCCTTATTTTCAACGTACTTATCGGGCGGT
AATAAGGCGTCGGATCCACGCCCAAAACTTGCGCCCTCCTGTTCTGCCAG
TTCTAAAACACCACCCCAGAGGCGGTCAGTCCTTAACAATCGGTGACAAC
CAACGATAATTAAATGATGTTTAGCACGAGACAGCGCTACATTGGTGCGC
CGCGGGCAGTTTATAAATCCGATAAATTTGGTTCGTACGCACGACAAAAT
AATAACGTCTTTTTCTGCACCTTGAAAAGCATCAACTGTTGAAATTTGAA
CACCTTTTAACTCCATTGCCGATAGAACTCCTGATTCTTGTAGTTGGTTG
GAAATTCGTTTCACCTGAGCTTTATACTGGGTTATGATTCCAACTTGGGT
CGGTTCAAGACCTTCTGCTAAGATCGCGTTAACCAGTTTTACACAATACT
GTACTTCCTTAACGTTGAATAAACTGCCATCGGAGGCTGTTGCTTCCTTT
CCGTCCGAAATATCAGCAATTGATACTGGACCTAACCAATCAAGTAACGG
GCCTCGATCATCGGTCGAAACTCCATCCGTAAGCATTCCTTTATAAAACA
TCTTACTNTGGCCCCGATCATCAGTCGAAACTCCATCCGTAAGCATTCCT
TTATAAAACATCTTACTGCATAGCAAACTGATCGCTGGGTGGCATCGGTA
TTGGCATCTCAAAATGATAGGATCTAAGCCAGCTTTCTGCAATCGCTCGA
ATAAAGTCACTTCCAAACCTTCTGGATGTGCACTTTCTGACCCTTGAATA
GTTGGACTGAGCTGGTTAGGATCACCAACCAGCACTAGCCTTTGACAATG
GAAACGAGCAATTGGCACCATGGATAGAGGCTCGATCATTTGACTGCATT
CATCCAGAAGATGTACTTGGAATGTCAGATTCTTCAGTAAAGGAAACGAG
CATGCAGCACACGTCACACCAACGACTNAAAGATGTACTTGGAATGTAAG
ATTCTTCAGTAAAGGAAACGAGCATGCAGCACACGTCACACCAACGACTC
GGACTCGATTCAAACGTGTTCGATTGGCACCCATTTTGTGAGCTTCGATT
GCTTTCTTAACATAATC Run BLAST on NCBI transcript from alignment at scaffold_234:231807..248263+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053802 ID=TCONS_00053802|Name=TCONS_00053802|organism=Clytia hemisphaerica|type=transcript|length=16457bp|location=Sequence derived from alignment at scaffold_234:231807..248263+ (Clytia hemisphaerica)
TTTTTCTTCAGTCTCAACAGAAGTTAAATGAGAGACGTCAAGCAGGTCTA
GCAGAGCAACAAAGATGCCACGCTAGAAGAAGAGACATGGTacgtacact
ctttttttataagcataacgtttattaGCATACTTAGGCTCAGATTCGGT
AAAAACAAGCATATCTCTAAGctgaaatacaaaagaaatcgTGCAGCTTT
TCTAGAACActgacctttttagggttactttCAAAGCTGTCTGagctttc
ttagaccaaagattttcgccTATGGCGCCCATTTACGaagaaaactttca
ttctttgagccgaatcaatcttccgacttaaaaattcgaaattttcataa
acacaaagaaaatcaacaaatctaagtctaagcatataaataagcataaa
ttaagggctctgaccatagtccaaaaattgattttggtatttgaacataa
aagttatatttcaggttccttaacacttttaacaaagaattgcctttata
aatagctttttaatcgaatcccttaagagtaataaagaatttaattgcaa
aaatgacgtaatgaactttaaaaagatgttaataatatgttgcatcaccc
tcttttacaaaaaatgcttagttttaatgggtaattaactttttttttca
aaatttctttacactgtccgcaaagaattgaactattttaaattttgcgg
aaaatttgtctaaaaagatgtgtcaaaagttatgactgtttttttaagca
aaatccagataaaaaattgatgaaaaaccactattttgaagatttcgaga
caaagaagcatttgcaaaaattttccgcaaaaatttttattgttcagtaa
aagatacaccatctactgcgaaaaatttttcaaaatgttttttcttcgcc
gaaactaagagTTTGAGACACTTGCCGCTTAGCATGGGGTATCTTAGTCA
GAAATTTGTCGGTTCGAGACCAACCTAAGTCTCTCTGTACGTTGGGCACA
TCTCGGGTCGCTtagattctttttttataagagcaacgaggttcaaaaaa
taagaacaatttaaataCAAGGTTCAGTtgaccctctctaattcgatctc
caAATGGCAAACTTTCTTCGAATTAAGGAAGGATTCGAATTAGGGAAGGA
TTCGAATTAGGGAAGGATTCGAATTACGGAAAGTAATTTGAGCCAATTTT
CAGCTAAGGGGAACAATATTTTGATTCGAATGACACAAATATTCGAAtat
atagaggttcgaattagagagagttgacggTACGGTACATATCAAAGTCC
ACTACTTATTATATTTTATAGATGGCAGAGCAGAATGCATACGAATGTCA
AAAAGCATTCGGACAACAGACATCAAATCCGTCATACCGTTCAGCAAAGG
TAAGGAACAAATGTTTGGTATCTCAGAACCCCTAATCTCCaagcagattc
tgatactccACTCATGGCACGTATGACACTCTAAAGAtcatggctccgta
agagaatctgctCAGGTCGGCACaccgctttgatctttttcatccagacT
TGGGATGAATAATAAATCATCTTCTTAGCGCGctgattggctaaagcaaa
acaattacACCAAATTCAAAAGCCAAATGAAACCGTAATGACGGCTGCTA
ACTCCGGTAATTGTCATGggtcagcctttcttaatatatctaacacaaaa
tttaaaagagtatacCCTAGTAATTGCGAGTGCAAACGCAAACTaaatcg
ggaaatcaaaccGGAAAGGTCGGGAAATCGAACCCGACTATCGCGATTAA
TCGGGTTTATGCCCAATTataaatgaaaaacactgattttaagaacCTCC
TTAACCGGAGTTTAATTATAACAATAAACATGAACCAAGCCGCTTtcgct
ttcaaaaaaaaacaacgcaGATTTGATTGTTTTGACTGAGCAGTCGAGTC
AGATCTTCACATTCGCCATACCCCTTTAGAGAAGAGCTGGAATGCGCATA
CAGAATGTTCTGAGGTTCAAGGGAGGTTGAGAATAGACATTATTGATTCT
TAAAAGGGGGCCCTAAAAGGTGTGTATACTATCTAAAAAACAGTCTGAAC
AGGATAAAGAGATTAATCAGGCTTTCAAGAGAGCGAGAGGAGGGGACAAA
AAAATCCAGTCAACACAGAACCTCATGGACATTTTTGATTGGGCTTAAAG
TAATCTCATCAAGGAATATTTAATACTTTTACATTTGAAAGTAGTGGTTT
CGCCTGGttcttttcgttcttttttgAATGTCAATTTAAAGAACGATGAT
AGTATCTTTTGCTCTATGATGAAGTCTATTcttctaaagaatcctgcatt
tatCACACGCATgtgtaatttgtcgttcttttaaaccatgcagttaattc
ccgtgGTAAACAAAGAGGGATGAATCGATCCGTAGGAGTGGTACAGTCGG
GGTTGTGaacggcgaaatatgtcgttttttatgaaatttgtcgttctttt
tgtctctttttagtaattcaggattctttagataaaccccctcatATGTG
GATATTGGATCCTGGAGTTATTGATTTTTAATCAAATTGAAAGGTTATTC
TCAAGGCTTAAAGCTTGAAGTAGCGTCGGTGACTTGCTGTGTAGAGAGGA
TCTCTAAGGGGTGGGACAGGGCGGGGTTAATTGGTTTGCAAACTCACAGG
AATGTCTAAAGAGGGGTCGGTTAACGACTAtgggggattaaatttggcta
TATTTTTACATTTCCAACGTTTTTGCGAAACTCTGAGtgtacaattttca
aaactcaAGATTTAGATATAATCTCTATACGATTCcatcaacggattaga
ataggtggattaacttctctcgttgctcccaagagagatccattgtcttc
tcattgttacaagaaaaatctgtaaatgactctgcgcactCCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaacttatcaagt
tttaattgctagcaaactcgtaaaaaagtttgataacctaacgaggagtg
ttttctatgagttcttaatccacctattctaatccgttgattCCATACAA
TTCAACCACAAAAGTTTGAATGCCGGTTGTCGAAATAAACATCGTCAATC
CTTCTTTTCATTGTACAAGTACATTGTACAAgtcttttgagatttttgaa
attttgtccaAAATTTTTTCAGGATTACGCtaatgtcaaattttcaataG
GACCTAACTTTGTGGATTTTTGAATTTAACCCAGTGAAATTTTGTTTCAT
AAAAGTacatatttgacattttttgcaatCTGGTTTCGAATAATTCTAGA
TGTTTATCAAAGATGGGAAAAGCATATATATGTGCTATCATGTAAATTGA
TCGCTCTTTTAGCAGACATTTCCAGTAAGATCCTTTCAGTAGATAATAAT
TTGataataataaaatgaaaacaaattctTGTGTCATGAGGTCTACTTTC
AAGTTAATTTACTTCTTCTTTCTTCATCTATAAAAGTTTTANTGTGTCAT
GAGGTCTACTTTTAAGTTAATTTACTTCTTCTTTCTTCATCTATAAAAGT
TTTAAACGTTTCTTGGcgaaaaaacatttcaaatttcaacaCGTTTTGAC
CTACAGCTATTTGTTTGTTGTCATTTTATGTTTTGGTTTCGAATTTACAA
ACTTGGTTTAGTATTTAAGTTATAAAaccataggcggttttagaacctgt
cgaacttatcagaggaagagatataccttaagggaataagTTAAtgcgga
ataaattaatgcgaatgACACctcaaaaatttcatgttttgcGGAATTGA
TTAATACGAATGAGCcacattttaaactttttcatgataaaatcacagca
aaattattgaaaatgcgGAATTTATTAATGCGAATTGACCAATGTTAGGA
ATTGCGGAATTAAATAATGCGAATTAGGGCCAAATTCGCATTAATTAATA
CCTTAAGGTATAAtagtaatttcattgtcttttaactccttcgcatgttt
cggACGTACTTGTTCTATTGTCTTGAATCCACCAGTGGAAACGTACCAAA
AGAACAAGAAGAATACGTGTAAAagctttctttataagaatactggtatt
ttcttcatttcatcAAGGATGCTCTTATAACATTTTAGGGAAAATCATCC
CAAAATTGGCTTACATTATTCCCCTTTGGGAGACTGAATTTCGatgtttt
tgggacccttagagagactttcctcgcaatctttatccattttcactcga
tttttgtccaaattttggaaaatcacgaccctttgtgcgaggaaatttcg
attttcgagAATTTTGGACCCTTAAAGAGAGTCAATTTGCTTTATAAtga
tttttgtacccctttgagagactttcgagggtttGAAAatgggaccctta
tggctcgcacatacttACCCGGCACCcgttttgcctaagtacccccNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTccttt
ttgccgattactagttcaatttttaagaataaggagcaatatttttacca
atgtatagcaaaagaaattcttaacgcaatgatgttaaattggttcttgt
aaaactgtcggagctcgagtaaaatcaagatgaagttataattttctcga
gctctagctttccatattatggtgcggtcatgatgcggttatatcagtag
aatcgctaggaaattctgagcaaaaagatataggtaccttttcgtatagg
agaggtgtgtccaaaatataagccctaacagtttgcgcataatcaggctt
gaaacaaaagaattttgtcacaacacgctaattatgcagattttttatag
cgacaacaaaagaaacctatttactcgacataaactcccttaaggacAAG
AGaactggtatatgacgagccattttcccattgttttcaagaagctgttt
ttccatctctttacattcctctggcagtctgtgccactaactcgatcggg
aagaatcttccgaaatgggaagaaccttcccaaacgggaagaacttactc
tatttttttctgcccgtttgggaagattcttcctctttgggaagttgaaa
attgactgaatcttcggcgaagctgtacgatgaccggcgaaagttgaaac
tttttggaggtgaaaaagcatcaaattttaaggattttcaccgaaagaaa
aataaactttaccgtggaaatcttgttaaattgtgaaaaaaactgCGTAG
Gcttcccaaacgggaagttccaacccgatcgagttttccttattttcccg
CTTCTTCCCGATCTGGAAGTCCGTTTTTAACTCTTACCCATTTGGGTGTC
aagttaatttcccgttcgggaaggttcttcccatttcggaagaattttcc
catttcggaagaatcttcccgatcgagttagtggcacagactgtctGGTT
GCACACACTCTATCTTTTTTGcatgcttccgtataaaacattacgtcatg
aaataTCAGAAATTCTTTAAATACATAGTCATacttagcctgggtatcca
gactcaaaattaaaaaaaaacactcttacctcaacatacaaagtttctaa
aattttagagtctggtgcaactaaaaaagttgggtacagtttgtttgata
ctgcctgtaAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNaagtgaacccttgttgacagactatcaaaactttgtaaacc
caggcagacacacataattaacttactataaaacctcttttacaaactca
aaaaactttcaaaactactttaagctatatcaaaacatcagccacattta
taaaggctcttttccagcggccattttgtttagaaatgaacctgcgtttt
aattttcatttgtttatctttttttgcaaggtcagctttttccataaatt
atgcgcgcgcgtcgaaaaatataaaaaaccccgcgaaaattctgctcagt
gactggtcgcatactgaccaattagagacactcgcatatgcagggacaga
tatccctgcagacgagttacttggaccagaccgtaaaccagagacaaaat
attaaaaaaaactagctagacggtgaaatagtttacgttctggatatcca
ggctaagtcATACAGTAACAGATTCTATATAAAAACGTGAAATGACAATT
CACTCACGAGGTGTAGTAAACTTCAATCACAACGGGATTAACAGCATCTT
GACAAAGATACACAAATGGTTGGTTTAAAAGTTGTTTATAATTTGAAAGG
CAAATAGAATTAGATAGAAAGAAAAACATGACATCTAATTTTTATCCTTT
CTTTATAAAATGATGGAAATATGTAAGTTGGAATAGAGGAGTGCTTAGTA
TTACGAGGAATATAACagacaaatttggaaaatattaaaatggaTGAGAA
GAAAATGTTCCATCAGGAGTAGTCAGTGTTTTGAGTAATCTTTACAAGCT
CGCTTTTAAATCCTGCTATCCTatacacctttttttttaaagtacatcca
aaatttttgaagcatttggatgttcttaactttttgagttttaagcctaa
aagtgttcttaacatattcttatttctaccattttgtgggtatttttgcc
cattttcctttGATGTTGGTGTTTTAGGGttagcaaagccttaaaatgtt
cttaacttgttcttaccattttggccatcgaagccttatgttcttatata
atttgttcttataaataaacgtgTATTCTAACGGAGCGTAGGACGGCatt
ggattttgaaatttctgtaGATATCGAGTCTATGATATTGTTTTCTATGT
CTGAGCTGTGAAAGATCTGTGAACGATTTTTGggttatcaaaataaaaca
atgacCAGAGGAGGGTGGGGAGCAAAAACGGAACAGTCGAAGTTACAGTT
TTCCCTGTGCCCTTTTTTTGCTCCCCTCCTCGGTGTCTTGAGAACGGGAC
GCTGGACATTAATCTTTTCTCAGCTTAACAAGTCCCAGGCATGgtttcaa
aacataaaaatggaAAAGTCAGTCTCTTATAtcttacacccccttctcac
acaaccgttaggattttttcagccagtgggggtaaaaatagcgggctgaa
actcgatggggattgaatTCCCATACCTTTTAAGaatggggatttaaatt
cttttgttttcaagtgagAAAATTCAATGGGCACAGGAAAAATAGCATta
cattttgcagtgaggattggattatttgattattttcagtgagacaaaaa
ttggagggtaattttccactggggatgatattttggccaatttttccagt
gggaaggggtcccagtgggtctgtgagaaaggggtgttattttttagaaa
tttttatttggctTTTGAACAGTGTTTGttggggttcgaaataccgtttt
cccgtcaaaatttttgctgaatcccggaatcccgaaaattggaaaaataa
taacaccgtcacaccggcttggACATAAATACCATCACCggctgatttta
aaataccgttttcccgtcaaaatttttgctgaatcccggaatcccgaaaa
ttggaaaaataataacaccgtcacaccggcttggACATAAATACCATCAC
Cggctgattttaaaataccgttttcccgtactaaaaaaggaccaatcccg
tcacaccgtaaatgtacaaccccccccccccccccccttgaaacGAGAAA
ACCTTGGATGACAGGTATTTTCAAGGTTGGAGGGGTATGTATGCCAAGAA
GGGCGAGGGAAGGGTGGTGTCAGCAATTCTGTCCAATTCGAAAGATACAG
GTAGCAAaccagtacacgtttttttataacagcaaactatgtaagaacac
aaggctttgatagccaaaatgttaagaacaagttaagaacattttaaggc
tttgcggattCTGAAACAACCATTTTAGGAAAAtgtggagaaattttcac
aaaatggagaaaatacgaacattttaagaacatttttaggcttagaatcc
aaaaatttaagaacatccaaaggcttcaaaaatttcagatgttcttataa
aaaaacgtatagatCTAAAGAAACTAAAGAAGATCATAACAGAttattta
aaagaatcattAGCATCGTTTACAGCCTTACTTAATTTTTCATGGGAAAA
CATTTAAGGATCTTGCAAAAGCTGtcatgttttttttgtaagcataaaAT
GGGGAAATGTAAACTAAGCCTCACTATATAAGCAATGTTTTAAGCACGAA
AATGCTTATTTCATGCACTTTTACCTACTATGAAAGTTCTAGTGAGCCCT
AAAAACTTAGAATATTTGGTGTCAGTATTGTGTATTTCGACTAAGACAAT
ACTAAGCTTCTTGgtgttcttaaagaaaaaacatttaaaagatcAAGGTA
ATTAGCTGGTTTAGCTGAGGTTAAAGAGCTATCTAATTTAATTGAGATTC
AATTAAAttataatgaaaataatttttcttgttAGAAGtgtatataaaaa
tttgatggaaaaaaaagatttgaaacaAGGATAAGAGCAGATTCACAAGG
CTTACACAGTGTTTCATCGTATACAGCTGAcgtaaaaaaaatcacaaatc
aaTCTTGTTGCTGTTGTGAGTGAGATCACTAGGTATTGAGGGAATATTGT
TTGTGCGTTGGTtcgaagaaagaaaaaggaatatTTAAATCCTTTCATTA
TGTCGTTCTTTCAGCAAGTTTTAAATTCGGTAAGTCATGGGTATTTATGA
TATTTAAGGAGGACACCATTTATAGATTATGAACGTGTCTGTCAATTTTG
AGACGACAAGACAGGTCAGGTTGAAGTAGATGTCATCAATATATAAAATT
ATACAtatgaaagttgtttttatgtCTTAAGGGTGGAATAAAGAAAGATG
TGTGGCTAACTGGAGAAGCTACAACAATGTGTCATACTAACCCTTTCCGT
GCAGACATGCGATatttcgacctatttgccggaaatttataattttttac
taGATTTTTCCATCTGAcggtttgaaataaaaaaaaaagaaaatttggaa
acttttcgatattgaaaaaaataactattctacaATTTTTAACTCAAAAT
CAAAGTCTTTGGCTGATACTTCTTATCTTACtcagaaaatgaagtgaaaa
tcgCTACGTTTTGCCAAtatcggcatatgccgacatccgGCAAATAGGTC
GAGGGTGTAAAAAAAGGCACAGCAGTTAAAGGGAAATAATACTTTCAAGG
GGATTTTGATGACATGGGGCGATTTTCTTACATCATTAAAAGCTAATAGT
AGATAATCAAAGGGTGGTATAAATCACAAATCACAGAAAATGTACACTTT
AGATAATCTAAGCATGacaaacgatagcccttgacccaataagcataaat
atgaaCTAGAATGTTAAGCAACCCCAGCACTAACccaaaaattggagttg
cttataaaaaacgtgtacgtgtTTCTGGtaaaatgtaaatcaaaataCAA
ATCGCTTGAATAAAGGAAGACTTTTTTCGTGTAGGCAAAATGTATAATAA
AATGCAACGTCGagtcaattttctttctttcagcATGGAGAATGGAAAGT
CCGCAATTTTTCCTGTTTCTCACTAATGAAACGTTTCAAGCTTATACAAC
AAAAAAATTCGagcaatttcaaaaactattctTTGACATCATAAAAATGA
GACTGAAAGAGaacagatttttttttgcaaaattcagCAAAACGANtact
ttatataaaaatgtgtctgctttttttgggacacactgtagttctataat
tttataagaaattggAGTGGCTTTTGGTGGTATCAGGGTTTAAACAAGAA
TgcatttaaataaaaaaacattactGTTAATTTCAGTATAAACTTTTCAT
GCAATAATGAAAACCTTAATTTTTAAACAATCAAGTTGCTCGTTTATTCT
GGTACTTTTGTGCTTTTTTATTGTTTAGGTACATATCTTAGATTTTTATA
GCCTTGTTTGACTAATTTGACCCATGATGATATATCCAAATTAAGTCTTC
TCAGACCACGTTCtagtctggagaccatactctgttacaaaaatatttct
atcctgtcaaaatcccaacaacttcactgaaatacagagtatggaattat
tgaNNNNNNNNNNcccttttagtacactgtactaactcaatttaatctaa
aaaatacaccaccccaccagctatgggccagtacactgactcgATACCCC
CCCtgtttgaagccaacaaatcctaccaaagttgcgcggccttgagtagt
ctggagaccatactctgttacaaaaatatttctatcctatcaaaatccca
acaacttcactgaaatacagagtatggaattattgactcaattcaaatca
cttcaaatcacaaaagaaaaaaccgttatcttttcaaaacaatttaaaag
ctcgcgccacttcttgaaacaatagagctgtttGACGTCACATCGCGCAG
AATTGACGTTACAGTTTTTGACATCAAAAAAATCCGGGGGTTTTGACGta
gatttttgacgtcaaaaaattagaagttgcaaatttcttaatttttcctt
ACCCTTGTTTATTACACTGCTTCCTGTGTATAATGTTTTCAGacataaat
ttgatatttttgaatcaCTGAATCTGTCCTCTTTTAAGAAATANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAGctgtttgacgtcatacttttgtttatcaaatcataacaa
taaaatattagccaatcaaattttgcgcTGATTCTTACATCTTCAATAAT
TCCCGGCTACTATGTAAAAACTCTGATATTTTCTGCTCGAACTAAATGCT
ATACCTCAAAACCACACGGACATTGTAGCCGGGTCTCCCAGCTAACCACG
TTCACACtctacggttccgtttcgctttaaggtctgaagacaaatcacgg
ttttactcaaaaaaaatttatgtgcttgttacatggtACAtgtatttctg
attggttcgaatttattgatcagctgtaagttgtaaagcaagtaacatcg
gcataaaatcacgtgaactttttcaagtaatcacatgttttgactgcatt
gatataattttgtaaCCCGTGTATTGTTCTATTTTTTAGAACATTGATTG
CTCTGATAAAATTGCTAAAACTTTCATTTCAACAGGACAAATCAAAGCAA
GAGGTTATCCAACGTGAggagcaaaaacaaaaacataagaAAGAGCGAGA
CAATTTggtacgtttttttataagaacaaacgttataagaacataaggct
tcgatgatcAAAATACTaggaaaaagaagaacattttaagactttacaGA
CTGTAGAACACCGGATTTCTTAAGAAGTTGCAcataaatacacgtttttt
tagaGCAAACgtcataagaacataaggcttcgatgacaaattaagaacaa
tttaagaacggTTTCCGACTTTGTCgaatctaaaacacccaatttcttca
GAAGTTGCACATACTCAATACTCATAAAAAGGTGAAAgtgagaatatttt
aagaacatttttagctcttaacttaaaaagttaagagcatccaaaTACTT
CAAACTTTGGACATTCTTATTCAAAAAATGTGTATAAAAACCAATGTGGG
CCAGCCTCAGTTGCTATTAATTTCTTTTCTTAAGTCTTAAAAGGGGTCAT
TAAACCTTGATAGCCAATTTATTCTTAGGTTTTAGCCAAATTTCAACAAC
TAATATGTTCTCTTGCgaattgttcttatagaaaagtaCACAGACTTAAA
GATctttactttaatttttttttcagagaaatGACGATAGGGGCGCGTCC
ACTTTTTGTACTGAAATCCCGGGGACGTTTCGTTTTCCACGAGTGAAGTC
TGTCTGGCTtctcaaataactttttttatgagaaatcttaaaacacacgg
ggaacacaaatttgttcgagttagggaaatttcgatttatggagtaaggt
ttataaggtattgttaactgaaaggaccataaaacttgttcgagttaagg
agacatagAGAGAGAAAGcaaaataataaacttctttcttcttttgactC
AGACAAttctaacagaaaacttcctttcatgaagaccaaatttcataaca
ctGCTTGAAAATAAGCCTCCCCCTTCCTTGTTATCCcccattttcattaa
aatttctgacccccccccaccttctttattttttcgaaaggtgtcatccc
cccttaagaaagggagggggtccgaactatggaggttcgaattaaagaga
cccgatgtatattttgttttttttttcagtacgAAGATCAGAACGAGGAT
GAATGTATGAGAGCCTACCAACGAGAAATGGCCAAgtcacaaaacaaaaa
acaaaacaacaagcCGTCTAATAATGGCTCAACCACAAATACAAATTCAA
CGAATGGCTGATAAAATGATATTTAAAACATACAGTTTCATATATGAATT
CTTATGAAAGTGCGACAGGTTATATAGAATCCCTCTAGACTCGTTACCTC
ATTCGAGCTTGAattattgaatttattttttatggaaaGTTTAAAACTCT
AGCATTGCATAAAATTGTGTTTAAGTGACTGCCAATCGAACtactttttg
aaatctttttattCGCCCTTCCAATTCTTAGAGCATAATAGGcttacaaa
ttttcatttcaataagtttgaaaaacaattcaaaattatTGACTTCACTT
TAAAATTGCATTCGGAGCTCATAAGTGTTATTCGAGTTCACAAATTTATA
AAGGCCCCTTTTAAATCAAGGAATTCTGACCTGACTCGGTTCTTTTAATC
AAGCCTATTTATTCataacccctcaaaatttaaggaTGTTATATTATTGT
ATAATTTTTGTTGTAACCTTATACTTCAATTATTTCAAAACCATTTACTG
TAAATAACATACACTGctcttgaaattaaattttacaaACTTGAAAACAC
TTTCATCTGCCTTTGAAATGTATTGTTCCCAATTCAACATGATGCAGAAG
ATTATAAAACATATGTACAGtaaacattaaaattttaccAGCAAAATACA
CCAATAAAAAACAGTAGAAATATAACCAAATAATTTGAGACAATTTATCA
TTTATGTAACTAAGGATAATCATTATATCAATAGTCCCTTCTCAGAATAC
CGTGGAAGGTTTTTCAGCCctgcaaaatcaaaaaatccagtggggatggt
tttggagtgcaatttgttccattaaatttcaaaaGGGGTTagttcaaagt
caatttcccagtggggctgaaattccggggtgttttcccaccggggacaa
aattttggccgAACTGTCCACTGCCGAACTGTCCACTGCCGAACTGTCCA
CTGCCGAACAGTGGGGCTTGAGCCTCAGCGAGGCTGTGGCACAGGGGTGT
GAAGGTTGTGCAGATGAATATCTCGACTGTACCCTCGAACAAAATGTTCC
TCGGAAGTTCGAAATAGAGTGATTCAACTATCGACTTTTCCATTACGaga
ttctattattcgaattaaTTCTAGGTGTCATTCAAGGTAAAATAATCAAT
AAATAAAATGCTTTCTTTAAAATTGGCATATCGCTGCATCTTTAACAAAT
AGCACATCCACGTGAATTCGAATTAGCGTAAGCCAACTGTAGAAGTGTTG
CAGGCCCCTTTAAAACACAAAAGTAAGAATGAAGAAAAACCTCTTACCAA
CAAGTTTGAACCAACCagaaacaatgaaaaaatcaacattCGAAATCATC
CGTAATAGAGTCCTTATTTTCAACGTACTTATCGGGCGGTAATAAGGCGT
CGGATCCACGCCCAAAACTTGCGCCCTCCTGTTCTGCCAGTTCTAAAACA
CCACCCCAGAGGCGGTCAGTCCTTAACAATCGGTGACAACCAACGATAAT
TAAATGATGTTTAGCACGAGACAGCGCTACATTGGTGCGCCGCGGGCAGT
TTATAAATCCGATAAATTTGGTTCGTACGCACGACAAAATAATAACGTCT
TTTTCTGCACCTTGAAAAGCATCAACTGTTGAAATTTGAACACCTTTTAA
CTCCATTGCCGATAGAACTCCTGATTCTTGTAGTTGGTTGGAAATTCGTT
TCACCTGAGCTTTATACTGGGTTATGATTCCAACTTGGGTCGGTTCAAGA
CCTTCTGCTAAGATCGCGTTAACCAGTTTTACACAATACTGTACTTCCTT
AACGTTGAATAAACTGCCATCGGAGGCTGTTGCTTCCTTTCCGTCCGAAA
TATCAGCAATTGATACTGGACCTAACCAATCAAGTAACGGGCCTCGATCA
TCGGTCGAAACTCCATCCGTAAGCATTCCTTTATAAAACATCTTACTNTG
GCCCCGATCATCAGTCGAAACTCCATCCGTAAGCATTCCTTTATAAAACA
TCTTACTGCATAGCAAACTGATCGCTGGGTGGCATCGGTATTGGCATCTC
AAAATGATAGGATCTAAGCCAGCTTTCTGCAATCGCTCGAATAAAGTCAC
TTCCAAACCTTCTGGATGTGCACTTTCTGACCCTTGAATAGTTGGACTGA
GCTGGTTAGGATCACCAACCAGCACTAGCCTTTGACAATGGAAACGAGCA
ATTGGCACCATGGATAGAGGCTCGATCATTTGACTGCATTCATCCAGAAG
ATGTACTTGGAATGTCAGATTCTTCAGTAAAGGAAACGAGCATGCAGCAC
ACGTCACACCAACGACTNAAAGATGTACTTGGAATGTAAGATTCTTCAGT
AAAGGAAACGAGCATGCAGCACACGTCACACCAACGACTCGGACTCGATT
CAAACGTGTTCGATTGGCACCCATTTTGTGAGCTTCGATTGCTTTCTTAA
CATAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053802-exon-scaffold_234-1491911889:231807..231895 | TCONS_00053802-exon-scaffold_234-1491911889:231807..231895 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1510915933:231807..231895 | TCONS_00053802-exon-scaffold_234-1510915933:231807..231895 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1575043694:231807..231895 | TCONS_00053802-exon-scaffold_234-1575043694:231807..231895 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1491911889:233128..233205 | TCONS_00053802-exon-scaffold_234-1491911889:233128..233205 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1510915933:233128..233205 | TCONS_00053802-exon-scaffold_234-1510915933:233128..233205 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1575043694:233128..233205 | TCONS_00053802-exon-scaffold_234-1575043694:233128..233205 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1491911889:244542..244613 | TCONS_00053802-exon-scaffold_234-1491911889:244542..244613 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1510915933:244542..244613 | TCONS_00053802-exon-scaffold_234-1510915933:244542..244613 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1575043694:244542..244613 | TCONS_00053802-exon-scaffold_234-1575043694:244542..244613 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1491911889:245686..248263 | TCONS_00053802-exon-scaffold_234-1491911889:245686..248263 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1510915933:245686..248263 | TCONS_00053802-exon-scaffold_234-1510915933:245686..248263 | Clytia hemisphaerica | exon |
| TCONS_00053802-exon-scaffold_234-1575043694:245686..248263 | TCONS_00053802-exon-scaffold_234-1575043694:245686..248263 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_234 | supercontig | scaffold_234:231807..248263 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
BLAST of TCONS_00053802 vs. Swiss-Prot (Human)
Match: ZGRF1 (Protein ZGRF1 OS=Homo sapiens GN=ZGRF1 PE=1 SV=3) HSP 1 Score: 299.286 bits (765), Expect = 5.644e-84 Identity = 158/342 (46.20%), Postives = 215/342 (62.87%), Query Frame = -1
Query: 1792 YVKKAIEAHKMGANRTRLNRVRVVGVTCAACSFPLLKNLTFQVHLXVVGVTCAACSFPLLKNLTFQVHLLDECSQMIEPLSMVPIARFHCQRLVLVGDPNQLSPTIQGSESAHPEGLEVTLFERLQKAGLDPIILRCQYRCHPAISLLCSKMFYKGMLTDGVSTDDRGXSKMFYKGMLTDGVSTDDRGPLLDWLGPVSIADISDGKEATASDGSLFNVKEVQYCVKLVNAILAEGLEPTQVGIITQYKAQVKRISNQLQESGV-LSAMELKGVQISTVDAFQGAEKDVIILSCVRTKFIGFINCPRRTNVALSRAKHHLIIVGCHRLLRTDRLWGGVLELAE 2814
YV+K+IE HK+G NRT L +VRVVGVT CAAC FP + +L F V +LDECSQ+ EP S++PIARF C++L+LVGDP QL PTIQGS++AH GLE TLF+RL G PI+LR QYRCHPAIS + + +FY KG L +GV+ +R PLL+WL + ++ G E D S NV E + +KL+ +++A G+ + +G+IT YK+Q+ ++ + L S V ++K VQ+STVDAFQGAEK++IILSCVRT+ +GFI+ +R NVAL+R K HL+IVG LR ++LWG V++ E
Sbjct: 1763 YVRKSIEQHKLGTNRTLLKQVRVVGVT------------------------CAACPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAISAIANDLFY--------------------KGALMNGVTEIERSPLLEWLPTLCFYNVK-GLEQIERDNSFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLL--SAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQVGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVIQHCE 2057
The following BLAST results are available for this feature:
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