TCONS_00005333 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005333
Unique NameTCONS_00005333
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2458

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005333 ID=TCONS_00005333|Name=TCONS_00005333|organism=Clytia hemisphaerica|type=transcript|length=2458bp
aagagaGTAatgttatttttatgttttgttcaAGATTTACCtcattaaaa
caaaaaacaacataagAAAAAAGGACTCTCCTGCTCCCTGTTTTCATTAT
AATTCCAAAATCTACTGTCAAGATGAAAGCTTTGATTCTTGTTGGAGGGT
ACGGAACTCGTCTGAGACCCTTAACATTGACAAGACCAAAACCACTTGTT
GAATTTTGTAATAAACCAACACTTTTGCACCAAGTGGAAGCTTTGGCTGC
TGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTTATCAGAAATGC
TTGAAAATGAACTTCGCAAGGAGGAAGAAAAGCTTGGTATCAAATTTAGT
ATGTCACACGAAGTTGAACCATTAGGAACAGCTGGTCCATTAGCACTTGC
TAAACATTGGCTGGAAGAATCAGATGaacctttctttgttttgaactGTG
ATATTACAAGTGAATTCCCTTTCAAGCAAATGTTAGAATTCCATAAGAAA
CATGGAAAAGAAGGAACAATTGTAGTCACCAAAGTAGAAGAACCTTCAAA
ATATGGGGTTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTG
TCGAGAAACCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTAT
ATATTTAGCCCGAGCATATTGAAAAGGATAGAGccaagACCAATGTCAAT
AGAAAAAGAAGTCTTCCCATATATGGCAAATGATAGCCAGCTATATTGCA
TGGAGTTATCAGGTCATTGGATGGATATTGGTCAACCAAAAGATTTCATC
ACTGGAACCAAATTACATTTAAATTCATTACGGAGGAGAAATGCGGAAGT
CTTATACGATGGAGAAGGTGTTCGAGGAAATGTTTTTACCGATCCAACAG
CTAAAATCGAGCCCGAATGTCAAATAGGACCAAATGTCGTTATAGGACCA
TATGCCGTCATCGAAAAAGgtGCATGTTTATCCAATTGCATAGTCATGAG
AGGGGCGACCATTCGATCACATTCCTGGGTACGAGATTCAATTATCGGAT
GGAAATCAACTGTCGGACGATGGGTCCGTATGGAAGGTGTATGCGTGCTT
GGAGAAGATGTCCATGTGAAGGATGAGATCTATTTAAATGGAGCTCGTGT
GCTACCTCATAAAACGATATCAGCCTCTGTTCCCGAACCCAATATTGTCA
TGTAGACTGGATAAGTTCTTTTTAACAACGTCTGTCAGTATTGTTGTCTC
ATGTGAAGCTTTCAAAGTTTAAAGATTGAAACTAAGGCTTCTCAGTTATC
AATTGGGTATGTTCTAAGtctttttcaaagaatttgttAAGGAAGACAAG
CTGAAGACTTTCAACTTCTATGAATATTATTTCTTTCGTTTTTAGAGTAA
acccttttgattttttttctaactaTAAGTGACGGGGCCCtactattctt
atttttttgtaacGGTTATTATAAAGGGTTCTGGGTaggatattttttaa
atgaattatgTGTTATTTAATAAACATAAAAACTAATAGTTAGGACAAGC
AACTGGATAAATTTTTGTTCAAATGTATGGCTACAAATTTACcatttcta
ttcatgatatgcaccactggagagccttccaagaattttcaaaaaattcc
aaCCAATGTGAAatttctcagaagactctccagtggtgcatatcatgaat
tctacCGCTTATAAGCGTTGAAATGTATTTATCAACCTTTGCGTTGCAAG
AGGATTGGGGCCGAATTTTTCCAGGGTTGTGTGATGTCAAATGTTGTTGT
TGCTGGCCAATGCATGATATGTACCATTGCAATATCTTCTGGCATTACAT
TATGgaaccaacagctgattggttgcaattttacgtcactttcaaccaat
cagctgtagggtccgtagaagacattgcaatggtgcatttCACGAATTGC
ATTATGAAGTCATTCAACTCggctgacctttatataccctggacacaGCT
TTTCGATACCGGCCAAACagaatctttgatcggagtatTTTGAAAGTGAT
ATTTTAATGATTTGTAAATTGACCCACATTGAGAAGTGCTACCATTAAGG
TTCCCTTTTTCTAAACTCTACAGGACAGTGTTCAACCATTGTAAACTTCG
GCCGAATCCTTTTGTGTGGTTCATAGTGGTATAACACCATGTTCGCATAT
AACGGTTCAGTTTCGCTcggaaacgaaatgaagccattctattggttaaa
agtgacgtaaaacttaaATTTAAACCAATAGGacggcttcatttcgtttc
ggagtgaAACGGAACCGTATTGTGCGAACGTGGTCCAAGCTATTCTTCAT
ATGTTTTATCAGCTTATTTTGATATTGCTGGTTATAGCTAACTATTAGTT
TTATCTTATTGTCTTATATCTATAGCTAAATTCAGGAAAGTCCTAGTCAA
AGACTTGC
Run BLAST on NCBI

transcript from alignment at sc0000052:333504..341696-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005333 ID=TCONS_00005333|Name=TCONS_00005333|organism=Clytia hemisphaerica|type=transcript|length=8193bp|location=Sequence derived from alignment at sc0000052:333504..341696- (Clytia hemisphaerica)
AAGAGAGGTGAGTAATATATTGGTACTGAATAATAGAGTAATGCCATAAG
ATCCATATAATCCATTTTCTCGCCTAGTAATGTTATTTTTATGTTTTGTT
CAAGATTTACCTCATTAAAACAAAAAACAACATAAGAAAAAAGGACTCTC
CTGCTCCCTGTTTTCATTATAATTCCAAAATCTACTGTCAAGATGAAAGC
TTTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGA
CAAGACCAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCAC
CAAGTGGAAGCTTTGGCTGCTGTAAGTATCTTTTCTTTTATTCTATATAT
TATGAACTCATTTGCACATTGACCATTGTAAGGAAGGGAGTGTGCTTTGA
AATTAAATTAAGTGAACTTACCTGTTTCTGAGTGAGTCAAATACTGTGAA
CTTATCTACCGTGAGATTTGGTAACTTGCATCAGTGGAGGCTAACATGCA
TAGCCCTCAAATGAATGACCTGGCTGGTCATTGAAATAAACTATATATTC
AGCTCCGCTCACAGCTCTACTCTACCATTTTTGTTTTGACTTAACCAGGC
CATTCATTTTAGGGCTATGCATGTTAGCCTCCAATGAACTGATGCAAGTT
ACACAATCTCACGGTAACTAATAAAATTCTGATGGAGTACAGTCAACTGC
TCTAACTTGGGACTATCTGACAAAACATGGGATGGCAATTCGGCCACCAT
TTCTCAAAAGCTCCAAAGTCATTTAATTTGAGTTAATGAATGGCGTATTA
AAAGAATACAGAATTTCTCTTTTGCACTGAGTAGCCTTTAAATCAAAATA
TGGAAAGAATCTGTAGTAGTGGAACACACGCGAATGTCTGGAACGAAGAA
GACCAAATTAGCAAAACAATGGAGTGTTGTCGTTATCGTGACATATTATG
ACAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAAAACAAATTTGTT
TTCAAAAAGAATTAACAGTAAGTATAAATACAGGCCAGATATCAACAGTC
CCATGCTTCGACCTATCGTCCCAAGTTAGATCAGTTGACCATAAATAGTT
ATTCAAAAGATCGTCGCATTCTAACAAACAACGATGATTGTAATCAAATA
TTACCCAGGGTTTGCCGTTCAATTGCTTCGATTACGTTTGATTGTATTCG
ATAATGTGTGATTACGTTCAATTGATTCAATCATAGTATTCACTTGCTTC
ATTATTCGCTCACGTACGTACATTACGTACTTTGCATATTGGCAGTCGCC
CACGCTAAAGCTCTAAAGGGTTGGGTCAATTTAATTGCAATCAAACTTAT
CGAATATAATCGTTAGATAAATGGAACGTAGTTGACAGTCAATTGAACCA
ATCGAACATTATTCAAACACAATCAAATATTACTTAGGAATTGGCCATTC
AATTAAGATTCAACAATTCAACAATCGAATAGCACTTATTTGATTGTGTT
TGATTACATTCAATCGGTTCGATCTTGATTTCCTTTCGAACATTTTCAAT
TAACACTGTCTGGACATTCTCCTGAATTATAACACGTGATAACGCAGGGG
ATAACGCTGCAAAAGTTTAGGGTTTCATTTATGTAATACAGAGCAGATAC
TTTCTGGCTCGAATGGGTGGAGTAATTTAATATGTAGAACTTAGTCAATA
GGTTGTCCCATTCTTCAAAATGGCTATTGCAAGGGGGTCATTTGTTCTCA
TTCACTATATTAAAGTGATACTGGTTAAAGAATTTTTGATAAATGCCCTC
TTCTAAAATCCAAAAAAAGTAATAAAAATCCAGGCCGTTTATTCAAAGTA
ATCTGGTTTACTACAAATGCGGTATATGAATAATGTAATTAATACACCAT
TCAAAAAATTATAAACACTTCCATAATTTCGAGTCACTAATATGACTTGA
AAGATTGCTCAAATCTACAGAGAGTGGTCAGAATATCAAACATCAATGCA
AAATGTACTCTTTATCAAATTTAAAAACTAAAAGTAAATGATATACATGG
TTATTCCTGTAATTAAGCAAAGATCTATTATTTTCTAAATGTTGAATTGT
GAAAAAGAATTCAGCTATTATTATTATTCAATTTTTCCCAATTCGTTACG
GAATGGGTTCTCTCGGAGAATAGTATTTCCAATTATTTTTCTATATGACT
TATTTCCAATAGGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTT
ATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGGTTAGCT
CCAATTTGTTTGAGATATTTTAAAAGCTTACCAACATATTTCTGATCAAT
TTAAAAGTTGAGGTTTAGGATCAAATTTCACCCCAAATCTTTCCAAGATA
TGGTATATACTTGACTGGATAAGCTTCCTGTTTAATCATGAAACTTCTTG
ATTATTTTCGGGATTTTTTTGTTTTTATAGTATTTTGTGCAATACACAAT
TATTTTAGTGATTCTCCTCATAATTTAGCTTGGTATCAAATTTAGTATGT
CACACGAAGTTGAACCATTAGGAACAGGTAAAATATCACTTTAAAAAGTC
TTTATTTCTTTACATCCACTTTCATATTGTGTTAGAAAAATTACAAAATG
ATTCACATTCTTCTCAAAGTTATTTCATAATAACTTTTGTTACCATGGTA
GATTTTTACACCTCTGAGTATTCTTGGATGTTATATTTAACGAAGGAAAG
TGACTTATATTGATAGTTTAGTGAAACATTAATAGTTTTTCCTTCCATAT
GTTTCCCTTCAAGTTATTAAAAAACTAAAAAAGCCTTTGAAAAGCTTTGC
TTTAACAGCAGAACCAGATAACAAAGAGCTCCAGGTTTTTAATGTCTCAT
GATTTGAACTCTATTATACAGATTCAAAAGGGTATAAATGTGAACTTAAA
TCACTGACCTTTATATATCCCTGGACCAAGCTATATCTGCCATCTTTGAT
CAAAGTTTTTTTTGAAATGGATGTAAAGAAGCCATTGTAGTGTTAAAAAT
TAATGTCTAACGGCGCTACATCATCAAAAGTATTCCAGAGAAGGTAGATC
TAACGCTCTCGATGTATTTACACCGCTATTGAGTGGTGCCACCTTTAGGG
TACCACTTTTCAAAAAACTTAGATCAAAGATTTCGCTTGGCCGGGATTGA
GAAACTTGGTCCAGGGTATATAAAGGTCAGTGACTTAAATGTACTATATT
TGTACTGAATGAAAACTTTATGACTCCAAGCAGGAATTTAAAAAAGTGAA
ATCCAAAAAAATACATGAATAAATGCCACATGATTATGTTATTTTTTATA
GCTGGTCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGAACC
TTTCTTTGTTTTGAACTGTGATATTACAAGTGAATTCCCTTTCAAGCAAA
TGTTAGAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTAGTAAGT
TCTTTTTCATTTTTCATTGCCTATATCTTTTTCTCATTCTTGCTTCACTT
TAGGAGGCCTGTTAAGTGATACTTCTGTGTTCTACTATTTTATGGACCTG
AGAAATCTTGAACAATTACTTTAGATGCTATGCTAAAATTAGATCCGTAG
AATATCTCGTCTGAATACCATCAACGTTTATATTTAGCGTATAGGCTTAT
TCCATTTAATAATTTCGAAATCATTACATTACTTTTTATACTATTGAATA
TTTAAAGATTCAAAGCAATTGTTCCCAATTATTTCCATCGAGTTGCCGTT
TCAATGAGTTTCTCGTCGTTATTATACATGGGTTAGCATTTTAACATCTC
TTGTTTGCATATTTAGGTCACCAAAGTAGAAGAACCTTCAAAATATGGGG
TTGTCGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTCGAGAAA
CCAAAAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATATATTTAG
CCCGAGCATATTGAAAAGGATAGAGGTGAGGCCATGTTCATATTTCTTGC
TTTTTATTTCTTCCCTTCCCTTTCTTTTGTTTTTTTTTCAATATTTCTTT
ATTGCCTTTTCTGTAAGAAAAACTGGGCACTGACACTCCTTTTCAACCCC
AGCGTTTTCCTCAGCGTTTACCTCAAGCATTTTGATACATTTTTCCAATT
TCATGTCAAAGCCTCAATTCGGGTTTTGTTTTTAAAAATAGATTCCTCGA
TGTAATAAGTATAGTTGAGGCTCAATAATTCATTCTTCATTGGGAATTGG
ATTTTCATTAAGTTAGAGAGCTTATCGAATAGTAGTAGAGTGTCGTTTAT
GAGAAGTTCTTGTTGATGGTAACTCTCAATATTATCGAATAATGAAGCGT
ATTGAATAGTAGGACGTCGAATTAGAGAATGTCCACTATACTCTAAAACT
TTATGATCATTTTCAGCCAAGACCAATGTCAATAGAAAAAGAAGTCTTCC
CATATATGGCAAATGATAGCCAGCTATATTGCATGGAGTTATCAGGTACA
TAGTTTTATGAATTTCTTTATTAGAGTAAACACCAACTCAATAGTACAAG
ATTTCAGGGGGAGTACTAGGATTGCGAGGTGACGGGCATGTTCGAGCCAA
AAACGATCCTTTGAGAGACTGAATTTCGAACATTTTGACTCTTTTTGACG
TCTTAACGGCCAATTTTGAGTCGATTTTTCTTGATTTTTTCAGAGACTTT
ATTGCTTTATGGTCTATGTACCCCTTTGATAGATTTTCGATGGTGTAAAA
AACGACCCTTATGGCTCGCACATACCTGACACCCATTTTGTCTAAATTGC
CACCCCCCCTCCTCCTCCTCTCCCCCTCCTCCCCCCTCTCCTGGGACTAG
GTTCGAACTCAAAGAGCAGAGATAATCTTTAATTTCAAGAAACTTGTGAT
TTAGCGGTGTAGTTAAGGGTTATTGATCGATATCTTTTGTTTTCAATTTA
GGTCATTGGATGGATATTGGTCAACCAAAAGATTTCATCACTGGAACCAA
ATTACATTTAAATTCATTACGGAGGAGAAATGCGGAAGTCTTATACGATG
GAGAAGGTGTTCGAGGAAATGTTTTTACCGTAAGGATATTTTCTTGGTCA
TTGTGTTCGATAGGATTTCGCTCTACGCGTGTGCATTTGAGGGAGCACTA
CTGGGTCTGAGTGCCAAACTATTCTTCGTACCGGGTGTCCCAGAAAAAAG
TTCCTCTCTTTGAAGTGAGTTTTATTTCGAGTTCTATCGACTTATAAAGA
ATCAATCATTTTGCATTGGAAAGAGGAAGGATAAACTTAAATTATGAAGG
GTCATTTGTCAAATCTGGTCAACTTAATCAAAAGATCTAAATGCTAAAAC
ATTACTTTTAAAAAAAAGTCGGTCAAAGTTGACAGAAAAGTATTGTGCTT
CATTGTTCATGTTTTGTTCCAGGATCCAACAGCTAAAATCGAGCCCGAAT
GTCAAATAGGACCAAATGTCGTTATAGGACCATATGCCGTCATCGAAAAA
GGTACGTTACGTTCTTATATAGAAATCTCATTTTTCAGTAGGCAAAAATG
TAAGGAATGTCGCCCCGCGATTGCCGATGATATTGACCCTGTCTTTGGTT
AGTTGTATTTGTTCATCACTGACCCTGTGTTCGTGACACAGCAGAGCTAG
GGCGTATAGGTAAAATTACTCTATCAAGCTTGGGAGAACGATTTCTCTCA
CAAGCCTGGATGAAGTCACACTCGCTTGCCAAATGAATCGCAGCACCTAG
TGAGAATCGAACCCTGGCCTTTATGGAAGCCAGGGACGAAAACACTGCTA
TTTCTATAACTAAGCAAATCATTCTATTTTATCTTCATTTAATTATTTTA
AAGGTGCATGTTTATCCAATTGCATAGTCATGAGAGGGGCGACCATTCGA
TCACATTCCTGGGTACGAGATTCAATTATCGGATGGAAATCAACTGTCGG
ACGATGGGTAGGTGTATTATTGTGTTTTTTATCAACTTCTTTCTTTTACA
CTTTTCTCTTAAAATTACCTGCTCCTCGGGAGACTGCTGATCTACCGATT
CCAGACCATCTAAAAGGAACGACAAATAACTATTAAAAAGCGACAAAAAG
AAAGACTAACCCTAACTATCAAAGAACGACATATTTCACCGTCCCAAATC
CCGATCTTGGTCAGTGACTACCATCTCTACACATTCATTACTCTTTGTAC
TTTACGCTGTTTAACGACTAGTGGTTTAAAGAACGATAAATCACGCTTGC
CTATAAGTCTCAATTTGGGTGAGCTGGAAACATTAGATGAACGAACTCTT
GGAAATAGCCGCTGTAAAATGAATTGCCTGTATTCTTATGTAGTTTTAAA
AAGAAAACATTCCATTGTGATGGAACAATCAACTTACAAACGCGCCCCAT
AAGTCTTTGCAAACTCAGCATTTTTTAATTGCCATTCAGACGTCATTTTT
AATAAACGTTTTTTTTTTGGGGCATCTAAATTTTTTGAAGCCTTGGGATG
TTCTTAACTTTTTGGGTCTAAAACCTAGAAATGTTCTTAAAATGTTCTTA
TTTTCACAATGTTTCCCCATTTTTCTATCAAAGCGAGTGTTTTTGAGTCT
TCAAAGCCTTAAAATGCTCTTAACTTGTTTTTATCGAAGCCTTAAGTTCT
TATGATAGTTTTTTCTTATAGAAAACGTGTACTGACAATGCATAGCCATT
CAGACGTCATTTTTTATACTGATAATGCAGCTCTAATACCTCTTTTTCCT
TTCATCAGGTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCAT
GTGAAGGATGAGATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAAC
GATATCAGCCTCTGTTCCCGAACCCAATATTGTCATGTAGACTGGATAAG
TTCTTTTTAACAACGTCTGTCAGTATTGTTGTCTCATGTGAAGCTTTCAA
AGTTTAAAGATTGAAACTAAGGCTTCTCAGTTATCAATTGGGTATGTTCT
AAGTCTTTTTCAAAGAATTTGTTAAGGAAGACAAGCTGAAGACTTTCAAC
TTCTATGAATATTATTTCTTTCGTTTTTAGAGTAAACCCTTTTGATTTTT
TTTCTAACTATAAGTGACGGGGCCCTACTATTCTTATTTTTTTGTAACGG
TTATTATAAAGGGTTCTGGGTAGGATATTTTTTAAATGAATTATGTGTTA
TTTAATAAACATAAAAACTAATAGTTAGGACAAGCAACTGGATAAATTTT
TGTTCAAATGTATGGCTACAAATTTACCATTTCTATTCATGATATGCACC
ACTGGAGAGCCTTCCAAGAATTTTCAAAAAATTCCAACCAATGTGAAATT
TCTCAGAAGACTCTCCAGTGGTGCATATCATGAATTCTACCGCTTATAAG
CGTTGAAATGTATTTATCAACCTTTGCGTTGCAAGAGGATTGGGGCCGAA
TTTTTCCAGGGTTGTGTGATGTCAAATGTTGTTGTTGCTGGCCAATGCAT
GATATGTACCATTGCAATATCTTCTGGCATTACATTATGGAACCAACAGC
TGATTGGTTGCAATTTTACGTCACTTTCAACCAATCAGCTGTAGGGTCCG
TAGAAGACATTGCAATGGTGCATTTCACGAATTGCATTATGAAGTCATTC
AACTCGGCTGACCTTTATATACCCTGGACACAGCTTTTCGATACCGGCCA
AACAGAATCTTTGATCGGAGTATTTTGAAAGTGATATTTTAATGATTTGT
AAATTGACCCACATTGAGAAGTGCTACCATTAAGGTTCCCTTTTTCTAAA
CTCTACAGGACAGTGTTCAACCATTGTAAACTTCGGCCGAATCCTTTTGT
GTGGTTCATAGTGGTATAACACCATGTTCGCATATAACGGTTCAGTTTCG
CTCGGAAACGAAATGAAGCCATTCTATTGGTTAAAAGTGACGTAAAACTT
AAATTTAAACCAATAGGACGGCTTCATTTCGTTTCGGAGTGAAACGGAAC
CGTATTGTGCGAACGTGGTCCAAGCTATTCTTCATATGTTTTATCAGCTT
ATTTTGATATTGCTGGTTATAGCTAACTATTAGTTTTATCTTATTGTCTT
ATATCTATAGCTAAATTCAGGAAAGTCCTAGTCAAAGACTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003035XLOC_003035Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005333-exon-sc0000052-1575043694:341690..341696TCONS_00005333-exon-sc0000052-1575043694:341690..341696Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:341376..341619TCONS_00005333-exon-sc0000052-1575043694:341376..341619Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:339404..339484TCONS_00005333-exon-sc0000052-1575043694:339404..339484Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:339120..339168TCONS_00005333-exon-sc0000052-1575043694:339120..339168Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:338203..338345TCONS_00005333-exon-sc0000052-1575043694:338203..338345Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:337672..337830TCONS_00005333-exon-sc0000052-1575043694:337672..337830Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:337152..337230TCONS_00005333-exon-sc0000052-1575043694:337152..337230Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:336568..336695TCONS_00005333-exon-sc0000052-1575043694:336568..336695Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:336146..336224TCONS_00005333-exon-sc0000052-1575043694:336146..336224Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:335690..335793TCONS_00005333-exon-sc0000052-1575043694:335690..335793Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1575043694:333504..334888TCONS_00005333-exon-sc0000052-1575043694:333504..334888Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:341690..341696TCONS_00005333-exon-sc0000052-1510915933:341690..341696Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:341376..341619TCONS_00005333-exon-sc0000052-1510915933:341376..341619Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:339404..339484TCONS_00005333-exon-sc0000052-1510915933:339404..339484Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:339120..339168TCONS_00005333-exon-sc0000052-1510915933:339120..339168Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:338203..338345TCONS_00005333-exon-sc0000052-1510915933:338203..338345Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:337672..337830TCONS_00005333-exon-sc0000052-1510915933:337672..337830Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:337152..337230TCONS_00005333-exon-sc0000052-1510915933:337152..337230Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:336568..336695TCONS_00005333-exon-sc0000052-1510915933:336568..336695Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:336146..336224TCONS_00005333-exon-sc0000052-1510915933:336146..336224Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:335690..335793TCONS_00005333-exon-sc0000052-1510915933:335690..335793Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1510915933:333504..334888TCONS_00005333-exon-sc0000052-1510915933:333504..334888Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:341690..341696TCONS_00005333-exon-sc0000052-1491911889:341690..341696Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:341376..341619TCONS_00005333-exon-sc0000052-1491911889:341376..341619Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:339404..339484TCONS_00005333-exon-sc0000052-1491911889:339404..339484Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:339120..339168TCONS_00005333-exon-sc0000052-1491911889:339120..339168Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:338203..338345TCONS_00005333-exon-sc0000052-1491911889:338203..338345Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:337672..337830TCONS_00005333-exon-sc0000052-1491911889:337672..337830Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:337152..337230TCONS_00005333-exon-sc0000052-1491911889:337152..337230Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:336568..336695TCONS_00005333-exon-sc0000052-1491911889:336568..336695Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:336146..336224TCONS_00005333-exon-sc0000052-1491911889:336146..336224Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:335690..335793TCONS_00005333-exon-sc0000052-1491911889:335690..335793Clytia hemisphaericaexon
TCONS_00005333-exon-sc0000052-1491911889:333504..334888TCONS_00005333-exon-sc0000052-1491911889:333504..334888Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:333504..341696 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.5005	29.9835	42.8049	45.2354	38.7755	11.1703	40.4258	50.4211	111.254	102.241	55.5274	59.2043	23.4448	15.2388	20.5699	24.7292	44.9599	45.6555	20.0731	43.573	38.2735	41.2338	23.3724	29.1561	7.66727	4.61794	33.6393	27.2801	27.4317	25.9811
Blast
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BLAST of TCONS_00005333 vs. Swiss-Prot (Human)
Match: GMPPB (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 469.159 bits (1206), Expect = 3.531e-158
Identity = 241/360 (66.94%), Postives = 292/360 (81.11%), Query Frame = 3 
Query:  123 MKALILVGGYGXXXXXXXXXXXXXXVEFCNKPTLLHQVEALAAAGVDHVILAVSYLSXXXXXXXXXXXXXXGIKFSMSHEVEPLGTAGPLALAKHWLEESDEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYEEDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPYMANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGVRGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSHSWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTISASVPEPNIVM 1202
            MKALILVGGYGTRLRPLTL+ PKPLV+FCNKP LLHQVEALAAAGVDHVILAVSY+S++LE E++ +E++LGI+ SMSHE EPLGTAGPLALA+  L E+ +PFFVLN D+  +FPF+ M++FH+ HG+EG+I+VTKVEEPSKYGVVV E D+G+I+ FVEKP+ +VSNKINAGMYI SP++L+RI+ +P SIEKEVFP MA + QLY MEL G WMDIGQPKDF+TG  L L SLR++  E L  G G+ GNV  DP+A+I   C IGPNV +GP  V+E G C+  C V+R A IRSHSW+   I+GW+  VG+WVRME V VLGEDV V DE+YLNGA VLPHK+I  SVPEP I+M
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360
The following BLAST results are available for this feature:
BLAST of TCONS_00005333 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GMPPB3.531e-15866.94Mannose-1-phosphate guanyltransferase beta OS=Homo... [more]
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