TCONS_00053030 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053030
Unique NameTCONS_00053030
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1796

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053030 ID=TCONS_00053030|Name=TCONS_00053030|organism=Clytia hemisphaerica|type=transcript|length=1796bp
CCATGCTGAAAATGATCAAGTTTATATTTGTCGTTTGATTTGTTTAAACA
TAAATAATCTTTCATTTACTTATGGGATGATTCATTTTACGAGAGTTTAC
TAAATTTACAACAAGGGCGATTGAgttgtttattttcattttttttgtga
attctgaaaaagaaagtgaaaatttaATGGCAATGGGGGAGAGGTGATAT
GATTAAAATTAGATGAGAATGCTGGTGAATAATTATTTGCTTGTGATTTT
AATGCTAGCACCTATTCCTTACGTTTTGTTGAAAGAAACACCCAAAGAGT
GCGGTATTGTACTtctacaaaaagaaaatgattcaCACTGTTTAAAAGAA
AGAAGGAGAAATCTACTTttccaaaaacaattttttcaaataacaAAACC
AGAGGATCATACTATATATGAAACAAATGCTAACTCAATTGGTTTTCACA
AGATTTTGCCCACTGTTCCCTGGTTGAATCGAAGCAAAGAAGAAATGGTG
GCCTATTACAGTTTCAATGACGAAGATTCGCGTTACATGGGCATGTTCGC
TGCATACATTAATTTCCTTAAAACTGTGGAAAAGAAAGTTCGTGATACTT
TCTTCATTGCACTCCGAAACACTACCGATGTTCCATCATTTCAATTCTAC
GAACGAATTAATCGAGCTTTCGATGGAAGTGTCAAGAAATTGAACACGTT
GTACGTGAGCAACCCTTGTCACAATAAAGAATGTTTAAAAGAGACTTCTC
AACAATACAACCCGCTGGACGATGAAATGTTTGTTCAAAGAAGGCTGGCT
GGACCATGTCCTTTCAACTTGAAACAAGTCTCTACAAATGGCGGTGAACA
ATGGACTTGTGTTTGTGTTGTACCACCCAGAGATTGACCACATCACCGCA
TCTTCTCCCTTCAGTGATCCTGCACAGGAAAGGACGTTTCGCAAAATGAA
CAATCCCATTGTTTTCTTCATACTGACAGATGACGgctttttgaaaatag
tttccATTCAAAGGGACAGTGAGAAAGATAGTGAAGTCCTGCAGCCGATA
GAGAGTGACCCGGAGGAATGGCTGAAAGTCAAAGGTGATGCTGAAATGGC
GGACTCCAATTACTGTCAAGGTTTTTACCATAGTGGTAAGATACACTTAG
TAAGCACCATTTACTGTTTGGCATACCGAAGACACATCGATAAAAACCAT
CCGCTTTATGACTTCTTCTTGTACCATTGTGAGGGTACTGTACCGCACAT
TTCTTTGGTTTATCACACTTTGCTGACGTCAAATGAACGATCAGATGCGT
CATTAGGTATGGGTCATCAAGGATTTTTGCAATTAGGAACCAAAGCGTTT
AACAGTAGAATGTATGGTGAACTTGATCTCCCATTCTTTTTAAAGCGAAA
AGGCTTGGATAACAAAAGAATCAAGTATTATCCCTTTCGAGATGATGCTG
AGGTACTTTGGGAGGAGCTGGCAGGGTTTACTAACGACGTCATCAGCGAA
ATCTACAAAACTGATGACGAGGTTTCCCAAGACCCTTCCCTACAATCTTT
CGCAACAGAATTGTCATCTAAAGATGCCGGTAATATGGCTGGATTTCCGA
CATATTTTGAAAGCAAACAATCAATACGATTGTTTCTTTTGAGATTTCTT
TGGTTCAATGTCATCCATACAAGTTTGAACTATCCATTAAATATGCACAG
TCAAACGTTCAGTCCTACAAAGTCCTATCAAAACATACAAAGAGAGCCAT
TCTCAACTTATCTTCAAACGTTACCTGATTTGTACACAGCCGTTGT
Run BLAST on NCBI

transcript from alignment at scaffold_224:92756..100121+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053030 ID=TCONS_00053030|Name=TCONS_00053030|organism=Clytia hemisphaerica|type=transcript|length=7366bp|location=Sequence derived from alignment at scaffold_224:92756..100121+ (Clytia hemisphaerica)
CCATGCTGAAAATGATCAAGTTTATATTTGTCGTTTGATTTGTTTAAACA
TAAATAATCTTTCATTTACTTATGGGATGATTCATTTTACGAGAGTTTAC
TAAATTTACAACAAGGGCGATTGAgttgtttattttcattttttttgtga
attctgaaaaagaaagtgaaaatttaATGGCAATGGGGGAGAGGTGATAT
GATTAAAATTAGATGAGAATGCTGGTGAATAATTATTTGCTTGTGATTTT
AATGCTAGCACCTATTCCTTACGTTTTGTTGAAAGGTAAGAATGCTCTCT
TTTCTCTGTTTTGTTTGAaataatttggcgaatttggcgaatgacGTCGA
AATATCccgcaaaaaaatgttttcgctCATTCGGAAAAATTTATTCTcgc
gaaaaacctttttttaattttcttggtgataTTTATGATTTTCATTATGC
AATGCTTTCTACGGAAGCACCCCGGCTTTTGCCAGTAGCggcaaatttca
aacaatttttctctttgcagcggagacaaaaaaggctgtaacttttgata
gaattcgaataagATGGCGGtcttgtgcttgttgaaaagataatccgaAG
TGGAatgttatcaaaaaagaaaataaattaaaagatcgaaaaacaaacat
gaaaaaggaagaagaaacTCAGCTTCGCGTAGAACAATGCTATCATCTTC
ATTTTATCGGaaattctttaatcttagaacgtcataaatgcgaaaaaata
ttcatgaaattttcattcagtcaaaaaatacagcttaaaactttgccctg
gttaacttgaaaaaggccttttttttgttatatttttatagtttttgtAG
TCAATCGCGTTAAATTTTGAACTGTATCTTTCGATGGAACAAATttcttt
aaacaattttttcacattaatgacgttctaagatcaaagaatcactcaTG
TAAAAATTATAATCATAGGACgattattgaagaagttgattttcttcttc
ttcattttcaatcttcattttccgatattttaaaagtttttttctttatg
ataatattccactcctgtttgtcttttcaacaagcgaaaaactgctatct
aattcgagttctatcaaaaattatagtcttttttttggctgcaaattata
ttgagacagactttaatttacATAAAAGTAAATTTGTAACTGTTCATGTC
CAGCACAATCTAATTCGATGAAAATGAATTCTCTTGATAATTCTTAAAGA
AAATTATCAAGTCAAACATGCAATGCGAAAATTTATGACATCTTTTAAAT
TTGCCTAAGTAGTTCATTGTAAAAACACAGATAGTTGCAAATCTGACGGC
TCGATTTTCTAACATTAAATATGTATTTGTGTTCGAAAGAAATTTATGTA
CTCTGATTttattctttgatttttcaGAAACACCCAAAGAGTGCGGTATT
GTACTtctacaaaaagaaaatgattcaCACTGTTTAAAAGAAAGAAGGAG
AAATCTACTTttccaaaaacaattttttcaaataacaAAACCAGAGGATC
ATACTATATATGAAACAAATGCTAACTCAATTGGTTTTCACAAGATTTTG
CCCACTGTTCCCTGGTTGAATCGAAGCAAAGAAGAAATGGTGGCCTATTA
CAGTTTCAATGACGAAGATTCGCGTTACATGGGCATGTTCGCTGCATACA
TTAATTTCCTTAAAACTGTGGAAAAGAAAGTTCGTGATACTTTCTTCATT
GCACTCCGAAACACTACCGATGTTCCATCATTTCAATTCTACGAACGAAT
TAATCGAGCTTTCGATGGAAGTGTCAAGGTAAACTACTGTTCTTTGCATT
CACCCAGCATTCCAATTTACACTAGTAATACATGGTTTACCTTCTTAAAA
GCGTNGTCATTTCAATTCTACGAGCGAATTAATCGAGCTTTCGATGGAAG
TGTCAAGGTAAACTACTGTTCTTTGCATTCACCCAGCTTTCCAATTTACA
CTAGTTATACATGGTTTACCTTCTTAAAAGCGTAAACAattctactttaa
tgggataaattttcgcggggattaattttcgcggatttcgcggatttggg
tgtcatccgcgaaaataagtcccattggaaatttgaaaaaggcccNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNccaatagtgccatccgcgaaaattaatccccg
cgaaatcttaaaatttcgcggatgagctcaaccgcgaaatttaatccccg
cgaaaatttatcccattaatcTTGCTTATCTTTGCTTTGGTAGAAATTGA
ACACGTTGTACGTGAGCAACCCTTGTCACAATAAAGAATGTTTAAAAGAG
ACTTCTCAACAATACAACCCGCTGGACGATGAAATGTTTGTTCAAAGAAG
GCTGGCTGGACCATGTCCTTTCAACTTGAAACAAGTCTCTACAAATGGTC
AgttcttattttctcattctcacgGTCGAATCATTATGGAGAAAACTCAG
TAGAAAAATTACTTACAAACAAGGTtctttaattcgattttcaagggcaC
CTTTATCGAATACAGGAGCGTGTCGAATAGTAGGGAGTTTCTCTAATCTA
TTAAAACGAGGAAATTTTAGACTTTAGATTGATTCGGAGATAATTTGGAC
AAATATTGAAGGTCTATCTATCACCAGCCGGGGAAAGAGAGATTGCAATT
TATTTGTGATTCACTGTATTTCTCAACTAAATCTACTACTAGATTATTAG
AATTCGATAATTTTTTCCAGGTCCGACTGGGATTCTTCTCTCTACCCTAA
AAAGAAAGATGAATTTGGATTTCGATTATGACCAAGCATTGACTCGAGCG
CTTGGTAAAAGAACCACTCTGGCAAAGGTAAATAAATAGAAGTGATAAAA
ATTGTCCATAGGTTTTATCTGGTAGAATTGTAAAACTACCTGAAAGAAAA
TGGTATTGTGAAGAAAGTTAAAAGGAAACTTGGAACATGTTACCAATCAC
CATAAAAAATTAgttcttgccaaaattagttccattAATCACAAACAAAT
TACAATCTCACTTTTTCCGGCTGGTGATAGGTATAGTAAATTCATTTTGG
TCAGGTTAGGTTATCTGGTTCCGATAAATGACCTCTAAAAGTGGTGGATT
TAGACGAAAACACAGACCGTTCTGGTTATTTTAAGGCAATCCTGATCAGG
GGCTTTGCAGGCTACCTCATATCTTCCTccgttttgagcgtaaaactcct
acccTTTGTGGATATTATTATTGATGTCGGCTAATGCACTCCGTTTAGGC
GGTGAACAATGGACTTGTGTTTGTGTTGTACCACCCAGAGATTGACCACA
TCACCGCATCTTCTCCCTTCAGTGATCCTGCACAGGAAAGGACGTTTCGC
AAAATGAACAATCCCATTGTTTTCTTCATACTGACAGATGACGgcttttt
gaaaatagtttccATTCAAAGGGACAGTGAGAAAGGTATCTTGATTCGTT
TTAACCATGGAGGtatataaagtaaaacaggAGATGTATGTTATTATAAC
CAaactcgccctacgattaaaaaagttacgaggtTTGCATATATcccata
tatcgtgcatttttaatgtgctcttttaaggccggtctccactttcgcgc
gacatgagcgaaaactttttgacgtttttgtaaggtcatcggtcgattga
aaaatgaagcaattccattggtcNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNgcgacatgagcgaaaactttttgacgtttttgtaa
ggtcattggtcgattgaaaaatgaagcaattccattggtcgaaattgacg
taatggatgaaaaaattagaacttccttcaactttttttttgttcgcgcg
aaacttttttatgacgtaatcttttctttaggcaaaaaaggttaagaaaa
aaactgtcgcccatttcgcgcgaaaacTTTATCCGTTGGTTAAATCTTTT
TGGGTCATTTCAGTGTTAAAATTaaatgagacgagattcattgtttctga
catcgaTGTAATAAagtatttttactaaaaatagcctacaaacttggcaa
tcctttaCAACAAATGGAGAGAATAAAGTTTTCTTCAAAGTAAACCCTGT
TGCTTTATACTTTCCTCTAAATTTTTCCAGCGcctttttgtctaaaaatt
gagtctgaaattgcgtttgcttataaagaactttccATTTTCTGGCttaa
gaaagtatttttttcaaaacaaaatttcacgGTTAACAAAATGGAACAGA
AACTTTTTTCGTTgtgagcttagaatttcttttgatacatttcatAAGAG
AAATCAAAAGACCAATTACTGAcaaattcaactcctgtttttctttatac
ttcGATGTTTGTTATACTTTCTTCTTCCTTCCCAATAATTTCCCAACTTA
TTTCTTGCTTCAGTTTTTATTCTTCTGACACCTGTACTCATCAATTGTCC
CGGTATCCTAATTATACTAATTTGAGGTTACAAATTATACCAGCATCGAC
CCTTACTCTTAGGTTACCAAATAAATCAACACccttttttcttatctttt
tgattacctttttaatttttactgGTTTTAACTAGATAGTGAAGTCCTGC
AGCCGATAGAGAGTGACCCGGAGGAATGGCTGAAAGTCAAAGGTGATGCT
GAAATGGCGGACTCCAATTACTGTCAAGGTTTTTACCATAGTGGTAAGAT
ACACTTAGTAAGCACCATTTACTGTTTGGCATACCGAAGACACATCGATA
AAAACCATCCGCTTTATGACTTCTTCTTGTACCATTGTGAGGGTACTGTA
CCGCACATTTCTTTGGTTTATCACACTTTGCTGACGTCAAATGAACGATC
AGATGCGTCATTAGGTATGGGTCATCAAGGATTTTTGCAATTAGGAACCA
AAGCGTTTAACAGTAGAATGTATGGTGAACTTGATCTCCCATTCTTTTTA
AAGGTAATTATTTCTTTCGATTCAAATGATTTGAATCAGATGATGATGTT
TTATGCTTTTTTCGATGATTAAGCTGACTGCAGACCTTCTTCTAATTTTA
CTTTCACCCTTTCTACTTNATTTTTTCGATGACTAAGCTGACTGCAGACC
TTCTTCTAATTTTACTTTCACCCTTTCTACTTTCGTATtggatggaaaaa
ataaaataaatcataTCAGACGCAAGCAACCTTTATTATCTTTGTCTTTT
TTCAGCGAAAAGGCTTGGATAACAAAAGAATCAAGTATTATCCCTTTCGA
GATGATGCTGAGGTACTTTGGGAGGAGCTGGCAGGGTTTACTAACGACGT
CATCAGCGAGTAAGTTTTTGTTTGATACCTTTACAATTTAAATGTCACAT
TTTCGTTTGGCATAGTGCTGAAATCTACTTTTCGGTGTTAGAACATGTCG
TAAAAGCAGTGTTGAAAGTAGGTACAGTAGAAATCATTGGATAGTTTact
tttcatttaattttctgGCTTACTCTTCTGTAcagaattcagtcaaatca
gCTACAGTATATCAACAGTTAAGGTATTAACGAGGTTAATGACTATAGTG
AACCACAATCGAGCTATTAAAAAGGAAAGTGGCTTCATTGGTTTTATAGA
ATCTACAAAACTGATGACGAGGTTTCCCAAGACCCTTCCCTACAATCTTT
CGCAACAGAATTGTCATCTAAAGATGCCGGTAATGTAAGTGCgccatttt
tcagtttttttctcgTACGTTTAGCCGTGATTTTAAAGATTTGTTccatt
ttcttgtatttttaaaggagaaTATCATTCTTTTATCATCAACCTGAAAA
ATTTAAGCCATCTAATTGACTAGAGAAGCAATATTTCCAGTATTTCATAT
TTATACCTAAAACTACGAGACCTCTTCAACATGAGGGGTGTGTAAGCGAG
AGGTCACAATCTGTAGAATTGTTTCTCTAATATAGTTGATCTAATCGTAT
AAAATAGAATATGATGAAGTGTTTTTGCTCAACAATATGCGTTTCTGTAA
GGGGTCCCTTAGTGCAAAGTGAGCAGAAGTAAATGCATATTTTCTCACTC
TGAAAACTATTTGACGACGCATTTCTATCGAAAGATTtccaaacaaaaaa
tatttttcagatttcGTTTTTTAAGACGGAAACAAGTATgtctcaaaaat
tataaaaaatttaaaaaatttacttaAGGTAAAACAATCTTCTTTAATTT
TCAGATGGCTGGATTTCCGACATATTTTGAAAGCAAACAATCAATACGAT
TGTTTCTTTTGAGATTTCTTTGGTTCAATGTCATCCATACAAGTTTGAAC
TATCCATTAAATATGCACAGTCAAACGTTCAGTCCTACAAAGTCCTATCA
AAACATACAAAGAGAGCCATTCTCAACTTATCTTCAAACGTTACCTGATT
TGTACACAGCCGTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033492XLOC_033492Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053030-exon-scaffold_224-1491911889:92756..93040TCONS_00053030-exon-scaffold_224-1491911889:92756..93040Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:92756..93040TCONS_00053030-exon-scaffold_224-1510915933:92756..93040Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:92756..93040TCONS_00053030-exon-scaffold_224-1575043694:92756..93040Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:94183..94583TCONS_00053030-exon-scaffold_224-1491911889:94183..94583Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:94183..94583TCONS_00053030-exon-scaffold_224-1510915933:94183..94583Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:94183..94583TCONS_00053030-exon-scaffold_224-1575043694:94183..94583Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:95699..95852TCONS_00053030-exon-scaffold_224-1491911889:95699..95852Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:95699..95852TCONS_00053030-exon-scaffold_224-1510915933:95699..95852Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:95699..95852TCONS_00053030-exon-scaffold_224-1575043694:95699..95852Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:96704..96890TCONS_00053030-exon-scaffold_224-1491911889:96704..96890Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:96704..96890TCONS_00053030-exon-scaffold_224-1510915933:96704..96890Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:96704..96890TCONS_00053030-exon-scaffold_224-1575043694:96704..96890Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:98291..98658TCONS_00053030-exon-scaffold_224-1491911889:98291..98658Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:98291..98658TCONS_00053030-exon-scaffold_224-1510915933:98291..98658Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:98291..98658TCONS_00053030-exon-scaffold_224-1575043694:98291..98658Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:98911..99014TCONS_00053030-exon-scaffold_224-1491911889:98911..99014Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:98911..99014TCONS_00053030-exon-scaffold_224-1510915933:98911..99014Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:98911..99014TCONS_00053030-exon-scaffold_224-1575043694:98911..99014Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:99305..99389TCONS_00053030-exon-scaffold_224-1491911889:99305..99389Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:99305..99389TCONS_00053030-exon-scaffold_224-1510915933:99305..99389Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:99305..99389TCONS_00053030-exon-scaffold_224-1575043694:99305..99389Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1491911889:99910..100121TCONS_00053030-exon-scaffold_224-1491911889:99910..100121Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1510915933:99910..100121TCONS_00053030-exon-scaffold_224-1510915933:99910..100121Clytia hemisphaericaexon
TCONS_00053030-exon-scaffold_224-1575043694:99910..100121TCONS_00053030-exon-scaffold_224-1575043694:99910..100121Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_224supercontigscaffold_224:92756..100121 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000653861	0	0.000281636	0	0	3.55878e-08	0.251936	0.325033	0.23285	0.00229812	0.205428	0	0.191585	0.6264	0.087831	0.105272	0.555928	0.179914	0.000857497	0	0.398089	0.557256	0.255886	0.690534	0.127564	0.590255	8.56449e-05	0	0	0.000359296
Blast
[Close]
BLAST of TCONS_00053030 vs. Swiss-Prot (Human)
Match: LOX5 (Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALOX5 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.789e-20
Identity = 72/290 (24.83%), Postives = 132/290 (45.52%), Query Frame = 1 
Query:  829 SLQMAVNNGLVFVLYHPEIDHITASSPFSDPAQERTFRKMNNPIVFFILTDDGFLKIVSIQRDSEKDSEVLQPIESDPE-EWLKVKGDAEMADSNYCQGFYHSGKIHLVSTIYCLAYRRHIDKNHPLYDFFLYHCEGTVPHISLVYHTLLTSNERSDASLGMGHQGFLQLGTKAFNSRMYGELDLPFFLKRKGLDNKR-IKYYPFRDDAEVLWEELAGFTNDVISEIYKTDDEVSQDPSLQSFATE--LSSKDAGNMAGFPTYFESKQSIRLFLLRFLW-FNVIHTSLNY 1683
            SL+  V  G +F++    +D I A+   +DP    T + +  PI          +  ++IQ +     E    + SD + +WL  K     +D +  Q   H  + HLVS ++ +A  R +   HP++   + H   T+   +     L+      D +   G  G +Q+  +A     Y  L  P  +K +G+++K  I YY +RDD  ++WE +  FT +V+   Y+ D  V +DP LQ F  +  +        +GFP   +S++ +  +L   ++  +  H ++N+
Sbjct:  272 SLEQEVQQGNIFIVDFELLDGIDANK--TDPC---TLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDENPIFLPSDAKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKEDIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSSGFPKSVKSREQLSEYLTVVIFTASAQHAAVNF 556
The following BLAST results are available for this feature:
BLAST of TCONS_00053030 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LOX52.789e-2024.83Arachidonate 5-lipoxygenase OS=Homo sapiens GN=ALO... [more]
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