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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000639 ID=TCONS_00000639|Name=TCONS_00000639|organism=Clytia hemisphaerica|type=transcript|length=1062bp
TTCAGAACAGTCAGCTTTGGACAAATTcgtgtgttttgtttttgataagc
TCTCATGTTCTTTTAACACCCCTTCAAGGCTTGACAGCTAACAATTAGAC
TAAGCTAGTACacgtcttttgtctttttttagctCTCtctcttgtagagc
tttgacgCACAGCAGAGAGAGCTTGGTAAATTTTGTGAAGACACCCGGTT
TAGTTTgtacatcaaaagcccttaggatgataAAGACAAAAGACTGTATA
GTTGATGCTCTCCTCTATAAGATAAGGAGAATAGACTTTCACGTTTCAAT
ACTTAGGATGATATGAGTGAGGGAAGCAACAACAAAGTTTCTCTCACATC
CATTGACCATTTAAAAGGTGGAGGTAATTGTGATTTATGCTGGAACTCTT
AATGCTTGAAATTATCTTACATGAAATGACACATGACATTGCACCCAAAG
GAATTAATTTTCATTAATGATGAGATACtctaaggcggcaatcacaaata
tcttcgtttcgcatCGCCCGACCAACTctcaaaaattgagtagaattgag
tcggtaaatttgtcagactttttctttccttcgttcaaaatttttattat
tgtcaaTTTCTTGCGAgtgatttctagcgcattcggggcattttgacttt
gtttatcattgcATGCGCCATTTTTGGTTGGAAGTCAGTGTTCAAgggtc
ataatttgaaaccacccatAACACGCGGTtattttggctgctggctggct
ggctggcagtttccttcaagaataccgTAGTAACTAAAAGGTGAAACGTC
agagaaacgggtggaaacggtGGAAACGACACGGAAAAGGGTGGAAACGA
AACGGAAACGATATGGAAACCAGTGGAAACAATACGGAAATTTATGCAAC
GCTAGCGCAGCATTTTAAAGATACATCTCCGTCTATCACAGGCTTTGCAT
AACCCTAAGAATATACGGATATAGGTAATCTATGAAAATTTTtgtgaaga
agtcgttgcagtgcacaCGGCAATCTTTGattggattaatcggattcaaa
tttccttgtttt Run BLAST on NCBI transcript from alignment at sc0000002:662758..663819 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000639 ID=TCONS_00000639|Name=TCONS_00000639|organism=Clytia hemisphaerica|type=transcript|length=1062bp|location=Sequence derived from alignment at sc0000002:662758..663819 (Clytia hemisphaerica)
aaaacaaggaaatttgaatccgattaatccaatCAAAGATTGCCGtgtgc
actgcaacgacttcttcacaAAAATTTTCATAGATTACCTATATCCGTAT
ATTCTTAGGGTTATGCAAAGCCTGTGATAGACGGAGATGTATCTTTAAAA
TGCTGCGCTAGCGTTGCATAAATTTCCGTATTGTTTCCACTGGTTTCCAT
ATCGTTTCCGTTTCGTTTCCACCCTTTTCCGTGTCGTTTCCaccgtttcc
acccgtttctctGACGTTTCACCTTTTAGTTACTAcggtattcttgaagg
aaactgccagccagccagccagcagccaaaataACCGCGTGTTatgggtg
gtttcaaattatgacccTTGAACACTGACTTCCAACCAAAAATGGCGCAT
gcaatgataaacaaagtcaaaatgccccgaatgcgctagaaatcacTCGC
AAGAAAttgacaataataaaaattttgaacgaaggaaagaaaaagtctga
caaatttaccgactcaattctactcaatttttgagAGTTGGTCGGGCGat
gcgaaacgaagatatttgtgattgccgccttagaGTATCTCATCATTAAT
GAAAATTAATTCCTTTGGGTGCAATGTCATGTGTCATTTCATGTAAGATA
ATTTCAAGCATTAAGAGTTCCAGCATAAATCACAATTACCTCCACCTTTT
AAATGGTCAATGGATGTGAGAGAAACTTTGTTGTTGCTTCCCTCACTCAT
ATCATCCTAAGTATTGAAACGTGAAAGTCTATTCTCCTTATCTTATAGAG
GAGAGCATCAACTATACAGTCTTTTGTCTTtatcatcctaagggcttttg
atgtacAAACTAAACCGGGTGTCTTCACAAAATTTACCAAGCTCTCTCTG
CTGTGcgtcaaagctctacaagagaGAGagctaaaaaaagacaaaagacg
tGTACTAGCTTAGTCTAATTGTTAGCTGTCAAGCCTTGAAGGGGTGTTAA
AAGAACATGAGAgcttatcaaaaacaaaacacacgAATTTGTCCAAAGCT
GACTGTTCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000639-exon-sc0000002-1491911889:662758..663819 | TCONS_00000639-exon-sc0000002-1491911889:662758..663819 | Clytia hemisphaerica | exon |
| TCONS_00000639-exon-sc0000002-1510915933:662758..663819 | TCONS_00000639-exon-sc0000002-1510915933:662758..663819 | Clytia hemisphaerica | exon |
| TCONS_00000639-exon-sc0000002-1575043694:662758..663819 | TCONS_00000639-exon-sc0000002-1575043694:662758..663819 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000002 | supercontig | sc0000002:662758..663819 . |
Blast
The following BLAST results are available for this feature:
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