TCONS_00052380 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052380
Unique NameTCONS_00052380
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1534

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052380 ID=TCONS_00052380|Name=TCONS_00052380|organism=Clytia hemisphaerica|type=transcript|length=1534bp
ATGATATTTCAGTCTAATTTTGGATATCAGACAAACAGTAGCCTATTATC
AAAAACAACTaaacatgaaaaattatattttggtatAAAAAGTGAGGTTA
ACTCGGATATTAACTTGAGAGACACACTTACCTGAGAAAGGGGTTNCAAC
TCCATAACAGTAATGAAGCAGTTGGTTTGGATGATGCTGAAGTGGAGGTC
CAAGACTTGGTGTACAGGAAAATCTCTGATCTAGATGTAGAGCCAATGTT
GGAATGCGACGTCCTTTCAGGATGTACAGTCAAGAATATCTTCAGCTTTT
CAATTGTCGCCAACTCGTCCAAAGAAGCTTGTAAACATCTTATGGTCAcc
ttgaaaaaacaattagacAGTGAAATGTTAAATGAATCACTAATAGTTGT
TGAATTCAAACTGACAAAGATACTCCAGATGAATGCTCCACCTTTGTTGT
GTTGGTTCAGAGTACTTTTGCTCCCAGCTACCGATAACAATAAATCTTAT
CAAATATTGCAAAGTCTGATCCAGAAAGATTCATTCAAAGATAACATATT
CGGaTGTCTTTCACCATTGGAGCATTTCCTTTACGATTCTGTTCTCCAAA
ACAGTGTTACAAAAGTCATCACTTTCATGGACAGTTTGGAAATGACTGAT
TCAACTCATCAAACATTGGACTTGTGTTCTTTGTTGAATACAGTCTCCTG
TTCACCTGTTCCTTGTACACCTTACTTGAAGAACCTACTTTTCAAATACG
TCGAACTtatcaaaaagttgaaaagcgATGTCCGTAAAAAGAAGGAAGCC
AGTGATATGACGTGTGATGAATTGAAGTCTCGATTATCTACTCTTGAACA
GTCTTACAGAGCCTTGCACCAGGAGAAAGAAGACTTGGCAAAACAGTCAG
TACAACTCCAAACAAAATATGAGAATATGGTGTACCAATTCGAAAGGaat
gatgaaataaaaagtaaccAAGCCGCTGAAAAACTCAAAATGACAAAAGA
GCTGGTCGATTTGAAATTGAAGGGCAACATTGAACAACAGAATGCTAACA
ACCAATTGCTGGATTTTAAGAATAAGTTGAAAGCAGAATATTCGAATGCG
TCAAAGTATGAACGCGATTACACTCTAGAACAAAAGCTGCATGTTGATTT
GAAAGAGCGATATGAGAACGTGAAACAAGAGAAATCCGAAATACAAGAAG
AACTGGTGAATTTGAAAGTGGCCTTTCATAGAATGAAAGAAGAAATTGAG
GATCACAAAGAGTACATCAAAGAGCAAGAGAAAACAATTTCCGATTTGTT
GAAAAGTAACGAAGAATACAAGAAGGGAAGGAATGACGATGATATCACAA
AAGAAAAGGAATTCTCAAGTCGATTGGAGAAGATTCTAACAATTGTCCCC
TCTGCAAAGGTGACTTCGGCGATCAAATTAGACATGGGTCCAGTTGGTTA
CAGATCACAACTTGATAAACTTGAAACCATAATAAAATCTCTGTCGAAAC
AGTGCTCTGATCAAAAGATTGAGATCAATGAGAN
Run BLAST on NCBI

transcript from alignment at scaffold_213:1005042..1016926-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052380 ID=TCONS_00052380|Name=TCONS_00052380|organism=Clytia hemisphaerica|type=transcript|length=11885bp|location=Sequence derived from alignment at scaffold_213:1005042..1016926- (Clytia hemisphaerica)
ATGATATTTCAGTCTAATTTTGGATATCAGACAAACAGTAGCCTATTATC
AAAAACAACTAAACATGAAAAATTATATTTTGGTATAAAAAGTGAGGTTA
ACTCGGATATTAACTTGAGAGACACACTTACCTGAGAAAGGGGTTNCAAC
TCCATAACAGTAATGAAGCAGTTGGTTTGGATGATGCTGAAGTGGAGGTC
CAAGACTTGGTGTACAGGAAAATCTCTGATCTAGGTATTAAATTTCAAAT
TCAGGATTTTCTTTTACTAGAATTCTTTATAATGATGGAAAGTCAATTTT
GCGCACAAAGTCCAATATATTGCTATTCATTTATCATGGACATTGGACCA
AACCTGATCAGACATATATTCTGTCCAACCCACTTAAAATCCCTATATCA
GGCGCGACTGANGGGTTAATTTTAAGCTTTCAGATAACCTCATAAAAAGG
GAAAATTGTGTGATAAAAATAGTGGGATCCATTATTCAATGGTTGAGGAA
CAAGGTAAAGTAGAAAAAACGAGGTTAATATCTTAGTTTGGGTACCAAAA
GTGAGGTTATTTGTGAATTGGGCTTATAGAGTTTTTTAATTCTTTGTTGT
ATACTTTAATGACTTATAAATCTGTTTTTGATATCAATACTGAGCTTAAA
AGTAAAGCTTAAGTCTTAATTAAGTCTGAATTAAAAATCTTTGAGGCTAA
CTTTTATCGTAGTATACCTTAAACGTTTTTCGTTCAGTTGTTTAAGTTTG
AAGGTATAAGCTAAAACATCCTACTTTTTCACGTTGTTTAACCTCATTTT
AAGAACCTTTTTGGTCTATTTCATATTTTTTTAGCTTAGTTACTTTATGA
AAACTTTTAAAAAGTAATTTTGTTCCTGTAGCTTTANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGCCATCAATTATGACCAACCCTCAAAATTTCAAC
CTTTTTAGATAAAAAATGAAGATTATATGGCCAATTATGTAAATTTTCCA
CTTTTTCCTCAAAAAAAATAACTTTTTCTTAGGCGACATTGATTTGAGAT
TGTCCTGATGTCTGATGGATACATATAGATAGATAATGAATTGATAAAAA
TGATTTATTTATGACTAAAACTATTTTCCTTTAAACGAGTAGCAATATCT
CCTAATAATAGAAATTAAATTTTATCAATAGGCTGCATCAAATGAATATG
GCTCTTTATTTAAGAAATAACATTCTGACAAAAGCAGCGGTAGCGACCTT
AGTGTAGTGGTAGAGCATCCGGCTACAGTGCGCAAGGTTGTGGGTTCTTC
CCCCAGCCGGGTCATACCAAAGATTCCCAAAATGGTAGTTGATGCTTCTC
TGCATGATGCTCAGCAATTAATTAAGAAGAGGATCAATGGTATGTGGAGC
AACCTTATACTTACTTACTAACAAAAAATGTGTTTTCAGATGTAGAGCCA
ATGTTGGAATGCGACGTCCTTTCAGGATGTACAGTCAAGAATATCTTCAG
CTTTTCAATTGTCGCCAACTCGTCCAAAGAAGCTTGTAAACATCTTATGG
TCACCTTGAAAAAACAATTAGACAGTGAAATGTTAAATGAATCACTAATA
GTTGTTGAATTCAAACTGACAAAGGTGAAACATTCAAGTTTTCATATTAA
AGTCTATTTGTTTTAAGTCTGTACTTTTTTTTGGCAACTACACACTCGAA
GGAATTGCTCTTGATTACGCTGACATGGTTCCACATTTTCCAGGATTTTT
CACATTCCAATATTTCCTTCAATTCATAAATTATTGTGGTGAAGAGAGAT
GGAATACATTGTATTAATAGTTGAAAATGCTATTATACTGCTCTGCCATC
TATATCACCCGAGTTGAGATAGTTTTGACATACATTGTTGACACATTGAA
TATTATTCTTTGAATCCTCAGTTAGCATACAGCTTGGCTCTGAAAGAGTA
ACCCCGTCAGATTCCCTATAGGGAATTTTCTTTCTGGTCAGTTCTACTCT
AATAAAACTTTTCTCTTTTGTTTAGATACTCCAGATGAATGCTCCACCTT
TGTTGTGTTGGTTCAGAGTACTTTTGCTCCCAGCTACCGATAACAATAAA
TCTTATCAAATATTGCAAAGTCTGATCCAGAAAGATTCATTCAAAGATAA
CATATTCGGGTAACTTTATTCAAACTAATTTTAGCGAAAAAGAAGTTTAC
TGGCTTTGGCGGTTACAGTTAAAATCTCATTTGTTTAAGATTTATTTGAC
GGCCCATCCTAAGCTGGATTTTGCTGTATATAGGCCATTTCACAATCGCA
AAGCGTAATGGGTAATCAGGACCACTGCGCGCTAATGACGACTGACTATT
GGTCAGTCTTGATTACCCATGATCCATTTCGACTGTGAAATGGCCTATAA
AAGTTCTGAAATACATGCTTTATATTTTTACAAGCTTTAGCTTTAACCCC
TTACCCAAAGCATCTAAAACTTATAAACCTNCCTTGAAAAAACAATTAGA
CAGTGAAATGTTAAATGAATCACTAATAGTTGTTGAATTCAAACTGACAA
AGGTGAAACATTCAAGTTTTCATATTAAAGTCTATTTGTTTTAAGTCTGT
ACTTTTTTTTGGCAACTACACACTCGAAGGAATTGCTCTTGATTACGCTG
ACATGGTTCCACATTTTCCAGGATTTTTCACATTCCAATATTTCCTTCAA
TTCATAAATTATTGTGGTGAAGAGAGATGGAATACATTGTATTAATAGTT
GAAAATGCTATTATACTGCTCTGCCATCTATATCACCCGAGTTGAGATAG
TTTTGACATACATTGTTGACACATTGAATATTATTCTTTGAATCCTCAGT
TAGCATACAGCTTGGCTCTGAAAGAGTAACCCCGTCAGATTCCCTATAGG
GAATTTTCTTTCTGGTCAGTTCTACTCTAATAAAACTTTTCTCTTTTGTT
TAGATACTCCAGATGAATGCTCCACCTTTGTTGTGTTGGTTCAGAGTACT
TTTGCTCCCAGCTACCGATAACAATAAATCTTATCAAATATTGCAAAGTC
TGATCCAGAAAGATTCATTCAAAGATAACATATTCGGGTAACTTTATTCA
AACTAATTTTAGCGAAAAAGAAGTTTACTGGCTTTGGCGGTTACAGTTAA
AATCTCATTTGTTTAAGATTTATTTGACGGCCCATCCTAAGCTGGATTTT
GCTGTATATAGGCCATTTCACAATCGCAAAGCGTAATGGGTAATCAGGAC
CACTGCGCGCTAATGACGACTGACTATTGGTCAGTCTTGATTACCCATGA
TCCATTTCGACTGTGAAATGGCCTATAAAAGTTCTGAAATACATGCTTTA
TATTTTTACAAGCTTTAGCTTTAACCCCTTACCCAAAGCATCTAAAACTT
ATAAACCTATCTTTCTTTATTTTAGATGTCTTTCACCATTGGAGCATTTC
CTTTACGATTCTGTTCTCCAAAACAGTGTTACAAAAGTCATCACTTTCAT
GGACAGTTTGGAAATGACTGATTCAACTCATCAAACATTGGACTTGTGTT
CTTTGTTGAATACAGTCTCCTGTTCACCTGTTCCTTGTACACCTTACTTG
AAGGTAAGAATACAACATTCAACCCTAGCCCTTTGTGTGCGCAGTTTTTT
TTATACTCTTTCTAAAAGCATTCGGTTTATGCCTCTTTAAATCAAGTGGT
CGGGAGCTATGGCCTTAAGTCTGAGACTCAGTATTTTGGCTTGTTTTGGA
CGCATATACGTGTCCCTCGTGGTCTAAGGGTTAAAAGGCATTATCAGATG
GTTTTTGATATTTGTCATAGAGATACCTTTTATGGTCCTGAGAGACACCT
CTAAAAGTTTTGTCCCAATTTTTTTCCAAAGCTGAGATATTTGACTTTGA
ACTTTGAACTTTACACAGTGTTTACGCTGAATTTCTATTGTTTTCAAGTA
AAAATTTGAAAATTTAAAGTCAAATATTTCAGCTTTGGAAAATAATTGGG
TCAAAAACTTTGGAGATGTTTCTTAGAACCATAAAATGTATCTCTAAGCA
AAATATAAAAAATCATCTGATAATCCCTTTAATGGTTGCGGTCGGCAATG
AATTTATGTCCATTAATTTTCCTGACTATACCAAAGTATAGTGACATGGA
TTGAATCTAGTGTTTTCTTTGTTTCTATGTGGTATTTTTGTAAAACAACG
TACGCTTGAAATTTACAATCATACTTAAAAGATTTGCCACTAGCCTTCAG
TTATTTCTTATTGGTAATGAATCTAACTATTTATTTATTGGGATATTATC
TTTTAGAACCTACTTTTCAAATACGTCGAACTTATCAAAAAGTTGAAAAG
CGATGTCCGTAAAAAGAAGGAAGCCAGTGATATGACGTGTGATGAATTGA
AGTCTCGATTATCTACTCTTGAACAGTCTTACAGGTAATTATATGTTGTG
AATATCTTAATTCCATTAATTTTTGCGCGCCTTTTATTTTTGCGCCTTTA
ATTTTCGCGCACCTCGTAAAATTGGATATTTACATTCCAGAGGCATATCT
ACATGTTGTTTTTTTTATAAGCATACAAAAATCCGAAAAAAGGCCCAGAG
CAGAGATGCTTAGGTCGAAAGCTTAATAAGGCTGAAAAATGCTTGAGGGG
AAGCTTAAATCTAAAGCATAAATTTAGGGAAATACTGAAAATCCGTAAAA
TTCCAGCCAAAAAAAGTCAAAATCAGGAAAAAAACGTTTTTCGTAGGCTC
AAGTAATGCTTGACATATGCTTAATTTTTTTGCCATATCTGAGCCTAGAT
ATGCTTATAAGTGCAATGCTTATAAAAAAAAAACATGTAACATAAATTGA
GGTCCCATTTTATTAAAGATGAGATTTCTACACATTCAAAACGATTACTA
ATCCACGCACCCATCAATTTTTGCGTGGCTAAGTGCGCGAAAAAAGGCCT
TTTTTATTTAAATTAATGAAATTAAGGTAAGTGAAACGAGATATACTATC
TTTTGAGTACAAAAACTATTGTATAATCATGGTTTGTACACAGATATGTA
GCAGCTAAAGCACCCCCTCTGCCTAGTAGCAAAGCAATCTTCCCCTCCGC
CATAAGTGGCAAATTAACCCCTCCCCCTCCGCCATAAGTGACAAATCAAC
CCCCTCCCCATAAGCCATAAGTGGCAAATTATGTTACGTTATATCTTCCT
TCTTTTCAAGCGTAAAACTCCTAGTAAGGCCTGAAGCCTGGAATTGTCTA
TTGTGAAGACTACTACTTGTGTTTTTTTTCAAAAAGCTTTTTGCATTGTA
GGGAAATAAAGACTTTCATTATTATTTGCCTAAATCACATGACAATACTA
CGTTGGTTAAGTTTCGGATTATTTATAGTGTGTTCATATACTGCCTATCC
GTCCTTCCCAGGACTAACCAGTGCGGCTCGGGTAAGCGAGCATAGACTGC
TGTTGTCACCAGAGTGCTCAAAACATTAAGTGTTGAGCTTCGCATAATCG
CTGTTTGTGGTGAAGGGAGAAGCAGAGATTGCTCCTCAACAGAGTCAATA
GAGTACCTAAAGAACTGAAGTTCTGAGCGTAATACATAGAGTGTTCATAT
AGAAATGTTGAAAGTTTATTTTTTCTCCTATTATAGAGCCTTGCACCAGG
AGAAAGAAGACTTGGCAAAACAGTCAGTACAACTCCAAACAAAATATGAG
AATATGGTGTACCAATTCGAAAGGAATGATGAAATAAAAAGTAACCAAGC
CGCTGAAAAACTCAAAGTAAAAATTAGTTTGCGGTAATTAACGAAAGGTT
GCCATGTTTGGAGTTTCTTTTTCGTAAATCTGTAAAATATTTGTTGGAAT
CAATTATTCTTTTTAAACTACCTGCACTCGCTTTAATCGGTCAAAGATGA
CTTTTACCAAAAGCTCTTCTTTATATGGTTCTGATTTAAAACACAATGAA
ATGTGCATTTTATTTAAATGTTAAAACTGATATTTCCTATCGAGAAGTGT
CTTCCCAATACTAGTTTCTAAAGATTTTCGGTCTGAGGTGAATACCAGGA
AGATTCCCCGGGTGGACATTTTAGTTACTATGGCCTGAGATTCGATCCAT
CGCATAAGATCCAACAGAATTAACGGTTTACATTTTCGAAAAAGAAATTA
GTTTCAAAGTTTAGTCTCTTTGGAGCCTCGATTTCAATGGTATAACTTTA
ATTTCCTCATTCCTCTTGATTTCTAGATGACAAAAGAGCTGGTCGATTTG
AAATTGAAGGGCAACATTGAACAACAGAATGCTAACAACCAATTGCTGGA
TTTTAAGAATAAGGTCCTCTTAAAAGTATTGACAAACCCTTGAACCCTAG
AATTTTAAAAAACTTGAATAACCTTGAAAATGCTGAAAAAATCCTCATAG
ACTTCTTTTTTTTAGTTGACGTTCTCTAATTCGATGTTCTACTATTCAAT
ATCCTCCATCATTCGATAATGTTTAAAGTAATTTGTCAACAATAAACTCT
CATAAAATGATACGCTCCCTTATTCGATGATAATCCAATTCCCCTTGAAG
ATCGAATTAGAGAGCGCCAACTGTATAGTAATCTTTCCGTTTTCATTCAA
TCTCCAACTCTTATTAATTCGACTACTTCCAAATTAACTATTGGGATGGA
CGAAGCAGAATTTCCAGGGGGTCTAAAAGAGTGTTTTTAAAGACTGGTTT
TAGTTCGTCCACCATCACTTTATGGTATGCAAAGAGATTTTCCAAGTCTT
TTTGCAAATTTTGCCATTTTCCAGGGGGTATCCGCACATTTTCAAAAAAA
GTCTTTTTACTTGAAAAGGTTCCTCCGCCCCCCCTGTATGGAAACTTAAT
GGATTGGCCCATTATAATATTTTCCTCTTATTTTCAGTTGAAAGCAGAAT
ATTCGAATGCGTCAAAGTATGAACGCGATTACACTCTAGAACAAAAGCTG
CATGTTGATTTGAAAGAGCGATATGAGAACGTGAAACAAGAGAAATCCGA
AATACAAGAAGAACTGGTGAATTTGAAAGTGGCCTTTCATAGAATGAAAG
AAGAAATTGAGGATCACGTATGAGAAAATTTTTCTCTTTTCTTGAGCCTT
AACCCTATTAGCCCCAGTGTGGGGGGGGGGGGGGATTTTAAGAAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGG
GGGTAGATTTTAAGAAAAGATAGGTAGATTCTATCCCCCCCATTAATATA
CGAAAATCAAAAAAGCTTGGGGTTAATAGCCTTAAAGGTTTTCTTCGCCA
TGGAGTGCGGAGAAAATACAGTGGAAACCTTTTAACTCAAACCTTTATCT
TATCTGATATTCCGATGGTGGATTGGCAGATGCCCATGCTAAAGCTCTAA
AGAAGTGGGCCAATTTCCCATCGAAGAGAAATGATAGTCGGCCTTTGAAG
TGCTGTATCTCCAGTCGGGTTCAACTACCCTTGCGCATAACGCTAAAAAT
ATTTCGGTTGGGCCCGACAATCCCTGAAACCCGCTGCAAAATCCTTGACG
TGGTCTTACAAAATTCCGTAATCTAAACCTTGTTGAAAACTCTGTTGATG
TTGAAAATTTTTCCGACCTTCAGCACTTTAGCATGTCAGATGAAAATTTC
TGTATCTGGATGTCAGATAAACCTTTATCTCAAATGTTTCCTTATCTCCA
ACAAGTGTTATGGTCCCTTCAGTTAACAATGCCTTATAAACCTTACTCCA
TTACTCGAAATTTCCTTAACTCGAACAATTGTTATGGTCCCTTCAGTTAA
CAATATCTGATAAACCTTACTCCATTACTCGAAATTTCCTTAACTCAAAC
AATTGTTATGGTCTCTTCAGTTAACAATATCTGATAAACCTTACTCCATT
ACTCGAAATTTCCTTAACTCAAACAATTGTTATGGTCTCTTCAGTTAACA
ATGCCTTATAAACCTTACTCCATTACTCGAAATTTCCTTAACTCGAACAA
TTGTTATGGTCCCTTCAGTTAACAATATCTGATAAACCTTACTCCATTAC
TCGAAATTTCCTTAATTCAAACAATTGTTATTGTCCCTTCAGTTAACAAT
ATCTGATAAACCTTACTCCATTACTCGAAATTTCCTTAACTCGAACAATT
GTTATGGTCCCTTCAGTTAACAATATCTGATAAACCTTACTCCATTACTC
GAAATTTCCTTAACTCGAACAATTGTTATGGTCCCTTCAGTTAACAATAT
CTGATAAACCTTACTCCATTACTCGAAATTTCCTTAACTCGAACAATTGT
TATGGTCCCTTCAGTTAACAATATCTGATAAACCTTACTCCATTACTCGA
AATTTCCTTAACTCGAACAATTGTTATGGTCCCTTCAGTTAACAATATCT
GATAAACCTTATTCTATATCTCTAAATATTAATAATTCGAACAAATTTGC
ATTTCCCGTGCTGCTTGTCCGAGTCATGTGGACTCTCCTGTAGAACACGT
TTAGACGGCCCACTTTTTGCCCTGTTTATTGTAATTATGAATTAAAGTGA
GCAGAATGTTGGCTGTCTAGTCAATGCATTATTGCCTTCATTTGACGTCG
ACACAATCTTTTCCAAGCAAAAATTTTACCTGCCAACTTTTAGCTTACTT
TTAGGATACTCTAACAATTAGAATAGGCAGGGTAGAAAGTCGGGCATCTA
AACTAGAGCTTATGTAATTTGAAAATCAAAATTAAACTTTGAACTTTTTC
CACTTTTCAGAAAGAGTACATCAAAGAGCAAGAGAAAACAATTTCCGATT
TGTTGAAAAGTAACGAAGAATACAAGAAGGGAAGGAATGACGATGATATC
ACAAAAGAAAAGGTTTGCAAATCAATAGATAATCGAGCAGGTTGGCCATT
GACCCTGTGAAAACGATTTAAAGACTGTTTAAAAGTCATCGATTAATCGG
CTATTCACGTAAAATATCGACTCTATCTATCTAGAGATTTATTTCTATCT
AATTGAGATAGATCTATCTAGAGATTTATCTCTATCATCTAGAGATTTAT
CTCTATCTAATTGAGATAGAAGATGTCTGTATGTCTAAATTTCAAATGAG
ATGGAGCAGGATGGAGTTTTTATAAGATACTTCACTAATTGGTCATTTGA
ATTAATAGAGATGACGCGTTCTTTAGAAAACGTAACAAAATTGTTTTATT
ACTGGTTAACAACCAACCAAATCAAATAAGAGCTTGTAAAAACTCCATCT
CGTCCCCTATAAATTTTGGGTAGGCTGTTTACTTCCTTTTTCGATTTAAC
TGAAATTATGGACATTTTATCATTGGGTGATTACCAGCTTAGTACTATGA
TAATGACAGGGAGTGTTTTTCCATTTTTAAAAATTTTTGTTAACTTTACC
ATTAGGACGAGTTCTTCACCAAAGCGAGGCTAAAACATTAGGGACGGCCT
GGAAACTTGAAAAATGGTCTGTTTTGACTAAGATTTTTTATATTTGATCC
ATGGTTGAACATCAGGGGGTTTATTTTTTTACTTTCTAGAAAAATTTGTT
TTGGTTTTGGAATGGGGCCTTCGAGTTGAATGAAGATCAGTATAATTTCA
ATTACTTTCAAATACTTTTTATTCTCATAGGAATTCTCAAGTCGATTGGA
GAAGATTCTAACAATTGTCCCCTCTGCAAAGGTGACTTCGGCGGTGAGAA
GCTAATAAAATCCTTATTTAAATTACACCAATTTCCTATGAGTGAATTTA
CATAAAAAAAGTCGAGTAAAAATCTTAGCTTTAATTGACGTTTTTTCGTG
ACTTTTTTATTGGAATCTGCTTTAGCGTAGATAATTTTAAGAAAACCTTC
ACTTTTCTTTAGATCAAATTAGACATGGGTCCAGTTGGTTACAGATCACA
ACTTGATAAACTTGAAACCATAATGTGAGTATCTGAGCCAGATCCTTGAT
GTATTTTTTACACTTTCTTGCATTTTTGTGTTCTTCATTTATCAAATTTT
TATTATCATGATACTTGGGTACATTTTACTACAATGCACTTATATCAACA
TTCATGTTTTTCATATCCTTGTCGAAAATAAATTTCCCTGTAAATTCATT
ACTCAAAAGTTGACTGCGCCAATAAGGATTTATAGGTGTAAATTGGGATT
CCAAATAGTTGGAAAGATATTGCAGAGTTGAGCCCGTTACATTTGATTTA
GTTCATCCACAGTTCACAAATACTAGGTAACTTTTTTGAGACACGCCTGA
AAGTTTCTGAAAACCTATTTTTTTCTCATTATAGAAAATCTCTGTCGAAA
CAGTGCTCTGATCAAAAGATTGAGATCAATGAGAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033113XLOC_033113Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052380-exon-scaffold_213-1575043694:1016693..1016926TCONS_00052380-exon-scaffold_213-1575043694:1016693..1016926Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1014003..1014187TCONS_00052380-exon-scaffold_213-1575043694:1014003..1014187Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1013468..1013601TCONS_00052380-exon-scaffold_213-1575043694:1013468..1013601Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1012024..1012201TCONS_00052380-exon-scaffold_213-1575043694:1012024..1012201Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1011193..1011320TCONS_00052380-exon-scaffold_213-1575043694:1011193..1011320Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1009861..1009990TCONS_00052380-exon-scaffold_213-1575043694:1009861..1009990Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1009314..1009400TCONS_00052380-exon-scaffold_213-1575043694:1009314..1009400Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1008560..1008739TCONS_00052380-exon-scaffold_213-1575043694:1008560..1008739Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1006515..1006616TCONS_00052380-exon-scaffold_213-1575043694:1006515..1006616Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1005684..1005746TCONS_00052380-exon-scaffold_213-1575043694:1005684..1005746Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1005453..1005514TCONS_00052380-exon-scaffold_213-1575043694:1005453..1005514Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1575043694:1005042..1005092TCONS_00052380-exon-scaffold_213-1575043694:1005042..1005092Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1016693..1016926TCONS_00052380-exon-scaffold_213-1510915933:1016693..1016926Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1014003..1014187TCONS_00052380-exon-scaffold_213-1510915933:1014003..1014187Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1013468..1013601TCONS_00052380-exon-scaffold_213-1510915933:1013468..1013601Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1012024..1012201TCONS_00052380-exon-scaffold_213-1510915933:1012024..1012201Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1011193..1011320TCONS_00052380-exon-scaffold_213-1510915933:1011193..1011320Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1009861..1009990TCONS_00052380-exon-scaffold_213-1510915933:1009861..1009990Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1009314..1009400TCONS_00052380-exon-scaffold_213-1510915933:1009314..1009400Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1008560..1008739TCONS_00052380-exon-scaffold_213-1510915933:1008560..1008739Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1006515..1006616TCONS_00052380-exon-scaffold_213-1510915933:1006515..1006616Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1005684..1005746TCONS_00052380-exon-scaffold_213-1510915933:1005684..1005746Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1005453..1005514TCONS_00052380-exon-scaffold_213-1510915933:1005453..1005514Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1510915933:1005042..1005092TCONS_00052380-exon-scaffold_213-1510915933:1005042..1005092Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1016693..1016926TCONS_00052380-exon-scaffold_213-1491911889:1016693..1016926Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1014003..1014187TCONS_00052380-exon-scaffold_213-1491911889:1014003..1014187Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1013468..1013601TCONS_00052380-exon-scaffold_213-1491911889:1013468..1013601Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1012024..1012201TCONS_00052380-exon-scaffold_213-1491911889:1012024..1012201Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1011193..1011320TCONS_00052380-exon-scaffold_213-1491911889:1011193..1011320Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1009861..1009990TCONS_00052380-exon-scaffold_213-1491911889:1009861..1009990Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1009314..1009400TCONS_00052380-exon-scaffold_213-1491911889:1009314..1009400Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1008560..1008739TCONS_00052380-exon-scaffold_213-1491911889:1008560..1008739Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1006515..1006616TCONS_00052380-exon-scaffold_213-1491911889:1006515..1006616Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1005684..1005746TCONS_00052380-exon-scaffold_213-1491911889:1005684..1005746Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1005453..1005514TCONS_00052380-exon-scaffold_213-1491911889:1005453..1005514Clytia hemisphaericaexon
TCONS_00052380-exon-scaffold_213-1491911889:1005042..1005092TCONS_00052380-exon-scaffold_213-1491911889:1005042..1005092Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1005042..1016926 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.95138	1.86517	3.07618	1.39876	53.5969	41.647	18.8723	16.8708	5.96582	7.15583	3.4073	4.25376	1.04715	0	0.709772	3.50903	2.9197	4.30935	3.60437	2.62438	3.27909	3.55039	4.19556	4.94238	4.29808	6.58497	2.95715	1.38304	4.22072	1.27243
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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