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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056109 ID=TCONS_00056109|Name=TCONS_00056109|organism=Clytia hemisphaerica|type=transcript|length=1386bp
ATTGATCTTATCTCTTATAGACTTCTTTTTAAAAAGTGGACAATACTCAA
TATCATGATCAGATTAGAGAGACGACACTTTATTTGAACACCGGTATGAT
AATTTCTAAGACCTTTGTTTGGACCCGAAGAAGGTGTTCTATTGAAAGGT
GAATTTTTATCATTCAGCAGTTTTCTTTGTTCTAGGGCTTCTTTCGAAAA
CAATGAATCACTCCACAAAGTCAATTCTTCTTCAACAAATGAAATCATAT
CCTTCAACTCTGGCTCCCGAAACTGTCTTGTTCTCAAAGACAAAGCCTTT
CTATTCCACTTTTCACGAATATTTCCTGGAAGTTTTGACAGAATCTAGAG
CATTCAAATAATTCCCTTCAACGacctttaaagtcttttttgacaaaatt
tcttaaatacttatagaatgacaaaaaagacgggggtaatgttattataa
tatgggtaaaaggaCCCCTCTTTTTTAACCTGGCTGAAATTTGAGACATT
AGTAGCAACCATGCGGGGCCTAAGACGCCGAGTATAAACCCGCAACCCGG
Catagtgacaagccgttactagcaaccctgaccctacctaactgttagtt
aatccaGTAATCCaggttaatcaattccaaacaacaaaacctcCGGAGAC
ATAAAATCATGGATAGGAGAAAAAACCATGTTCGACTGACggtcaatttt
tttcaacttcctctaaagtttgcctggaattctgtgccgaaatttatttt
taaaattgatgTCTTCTGGGAATATAGCCCATTTTGCTAGCAACTGGCAA
ATCAAGGTAGAGTACAGAGTATGCTGAAGGCACTTTGCAACTCTTATACA
TAGGGCTAGTTTAAATAATTTTGTGTAACACACACCTTCCTGAAGTACTt
tgaagaaagattttctgCCCTGATTagatcttttttcaaagaggacgtcc
tgttgaataattatgtagtccagctatAAAAACGATGATAGAGCCCTGTA
TCAtgtatattgtaataattatgcatggttttatcattgtttttctgctg
gNCAtgtatattgtaataattatgcatggttttatcattgtttttctgct
ggactacataattattcaacagggtggcctctttgaaaaaaggtctttCC
TTGGCGCTCCGAAGATCTCAACAAAAACACACAAGGCCAGTTGGAAAAAG
GCAGGTTAGCTAATTCATTCAATGAATGACAGAAGTATAAAGAAAGCAGA
GATGTCTTGCAAAATCTCTCTAAGATTATAATCTAAGAATTCTCTGTGTG
CTTGGCTTGTGTTGTTGAGGTTATCCGACAGTCCGATGCGATTTGAACTG
AGGTGTATTCTtttttttgcccccgcaggagcgcag Run BLAST on NCBI transcript from alignment at scaffold_267:9141..10526 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056109 ID=TCONS_00056109|Name=TCONS_00056109|organism=Clytia hemisphaerica|type=transcript|length=1386bp|location=Sequence derived from alignment at scaffold_267:9141..10526 (Clytia hemisphaerica)
ctgcgctcctgcgggggcaaaaaaaAGAATACACCTCAGTTCAAATCGCA
TCGGACTGTCGGATAACCTCAACAACACAAGCCAAGCACACAGAGAATTC
TTAGATTATAATCTTAGAGAGATTTTGCAAGACATCTCTGCTTTCTTTAT
ACTTCTGTCATTCATTGAATGAATTAGCTAACCTGCCTTTTTCCAACTGG
CCTTGTGTGTTTTTGTTGAGATCTTCGGAGCGCCAAGGaaagaccttttt
tcaaagaggccaccctgttgaataattatgtagtccagcagaaaaacaat
gataaaaccatgcataattattacaatatacaTGNccagcagaaaaacaa
tgataaaaccatgcataattattacaatatacaTGATACAGGGCTCTATC
ATCGTTTTTatagctggactacataattattcaacaggacgtcctctttg
aaaaaagatctAATCAGGGcagaaaatctttcttcaaAGTACTTCAGGAA
GGTGTGTGTTACACAAAATTATTTAAACTAGCCCTATGTATAAGAGTTGC
AAAGTGCCTTCAGCATACTCTGTACTCTACCTTGATTTGCCAGTTGCTAG
CAAAATGGGCTATATTCCCAGAAGAcatcaattttaaaaataaatttcgg
cacagaattccaggcaaactttagaggaagttgaaaaaaattgaccGTCA
GTCGAACATGGTTTTTTCTCCTATCCATGATTTTATGTCTCCGgaggttt
tgttgtttggaattgattaacctGGATTACtggattaactaacagttagg
tagggtcagggttgctagtaacggcttgtcactatGCCGGGTTGCGGGTT
TATACTCGGCGTCTTAGGCCCCGCATGGTTGCTACTAATGTCTCAAATTT
CAGCCAGGTTAAAAAAGAGGGGtccttttacccatattataataacatta
cccccgtcttttttgtcattctataagtatttaagaaattttgtcaaaaa
agactttaaaggtCGTTGAAGGGAATTATTTGAATGCTCTAGATTCTGTC
AAAACTTCCAGGAAATATTCGTGAAAAGTGGAATAGAAAGGCTTTGTCTT
TGAGAACAAGACAGTTTCGGGAGCCAGAGTTGAAGGATATGATTTCATTT
GTTGAAGAAGAATTGACTTTGTGGAGTGATTCATTGTTTTCGAAAGAAGC
CCTAGAACAAAGAAAACTGCTGAATGATAAAAATTCACCTTTCAATAGAA
CACCTTCTTCGGGTCCAAACAAAGGTCTTAGAAATTATCATACCGGTGTT
CAAATAAAGTGTCGTCTCTCTAATCTGATCATGATATTGAGTATTGTCCA
CTTTTTAAAAAGAAGTCTATAAGAGATAAGATCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056109-exon-scaffold_267-1491911889:9141..10526 | TCONS_00056109-exon-scaffold_267-1491911889:9141..10526 | Clytia hemisphaerica | exon |
| TCONS_00056109-exon-scaffold_267-1510915933:9141..10526 | TCONS_00056109-exon-scaffold_267-1510915933:9141..10526 | Clytia hemisphaerica | exon |
| TCONS_00056109-exon-scaffold_267-1575043694:9141..10526 | TCONS_00056109-exon-scaffold_267-1575043694:9141..10526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_267 | supercontig | scaffold_267:9141..10526 . |
Blast
The following BLAST results are available for this feature:
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