TCONS_00052002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052002
Unique NameTCONS_00052002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1317

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052002 ID=TCONS_00052002|Name=TCONS_00052002|organism=Clytia hemisphaerica|type=transcript|length=1317bp
CTAACTTTCGTTTTAAGTTTGctttacatttctttttttcagtttatCAA
ATTAAAATGAATACCAACTGGAAATATGAGGGAAAATTGGAGTTGTATGT
TGCTCAATGTTTGAAACGAACTGAGATTGTTGAActtatgaaaaaagaat
ttggcAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAGATTCAATCAT
TTTGGAATTAGATATACTGATACTGAAGTTCCTGTCGAGTCGGTCAGAGA
AGCTGTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTGGGCTACAGAG
CCATGCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGTTCCTAGGAAT
CTTGTTCATGATGTTATGTTTTTGGAAGAAAGTCAATTACTGAAGGACAG
AAGACCCTATCAGAAGAAAAAGAGAGTGAAGGGTCATTTTGTATCAAATG
GACCTAATTGGGTACACTCCTTTGATGGCCATGATAAGCTTATGGGCTAT
CAGAACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCGACACTGCTAG
TCGAAAGATACTTTGGCTCAAAATTTGGACTTCTAACAGCGACCCAAAGC
TTGTTGGTAAATGGTATCTTCAACATATCATTGAGACGAAAAGGATTTCA
AATATGGTTCGTCTTGATAAAGGTACCGAAACAGGTGATCTTGCGGCTAT
TCATTGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGACCCTTCATCTG
TGATACACTATGGTCCATCAACCTCAAATCAGATTGAGCGATGGTGGAAA
GAACTGCATGAAAGACTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTT
AAAATGTGGCGGACATTATGATCCAAGTTGTGAACAAGACAGgatgattt
tagcctatatcaTGATCCCAATCCTCCAAGCCGAACTTAACACATTCAAA
GATGTCATCTGGAATTGCCATCGCATTAGATATCAAAAAGACCAAGTTTT
ACCAGACGGTGTTCCCAACCACATTTATACCGTACCTGAGGTGCATGACC
TTGTTGAATGTGGCTTTGATGTATCAGACCAGGATATCCAATCCCTTATA
GATGAATCGGGAATCACACCAGAAGATGCCGACTACCTTGATGATGATTT
TAGGCATCTATGTGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTC
ATGAATGTCAGGAAGCGTATATATACTTAAAACGAGAGATTGAAAATGGC
AGTTTTTAAGAAACTTAAcaattaagttttttttctccataCCGTATTTC
CTctaactactttaatg
Run BLAST on NCBI

protein sequence of TCONS_00052002-protein

>TCONS_00052002-protein ID=TCONS_00052002-protein|Name=TCONS_00052002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=418bp
NFRFKFALHFFFSVYQIKMNTNWKYEGKLELYVAQCLKRTEIVELMKKEF
GNYPWSLSTLTRRFNHFGIRYTDTEVPVESVREAVSTELRGPGRLLGYRA
MHKKLRVVHGLKVPRNLVHDVMFLEESQLLKDRRPYQKKKRVKGHFVSNG
PNWVHSFDGHDKLMGYQNSTFPLAVYGCIDTASRKILWLKIWTSNSDPKL
VGKWYLQHIIETKRISNMVRLDKGTETGDLAAIHCFLRSRCDENLDPSSV
IHYGPSTSNQIERWWKELHERLEKFFKGQLLFLKCGGHYDPSCEQDRMIL
AYIMIPILQAELNTFKDVIWNCHRIRYQKDQVLPDGVPNHIYTVPEVHDL
VECGFDVSDQDIQSLIDESGITPEDADYLDDDFRHLCEQYLPNLELVKPH
ECQEAYIYLKREIENGSF
Run BLAST on NCBI

transcript from alignment at scaffold_208:444182..448076-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052002 ID=TCONS_00052002|Name=TCONS_00052002|organism=Clytia hemisphaerica|type=transcript|length=3895bp|location=Sequence derived from alignment at scaffold_208:444182..448076- (Clytia hemisphaerica)
CTAACTTTCGTTTTAAGTTTGCTTTACATTTCTTTTTTTCAGTTTATCAA ATTAAAATGAATACCAACTGGAAATATGAGGGAAAATTGGAGTTGTATGT TGCTCAATGTTTGAAACGAACTGAGATTGTTGAACTTATGAAAAAAGAAT TTGGCAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAGATTCAATCAT TTTGGAATTAGATATACTGATACTGAAGTTCCTGTCGAGTCGGTCAGAGA AGCTGTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTGGGCTACAGAG CCATGCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGTTCCTAGGAAT CTTGTTCATGATGTTATGTTTTTGGAAGAAAGTCAATTACTGAAGGACAG AAGACCCTATCAGAAGAAAAAGAGAGTGAAGGGTCATTTTGTATCAAATG GACCTAATTGGGTACACTCCTTTGATGGCCATGATAAGCTTATGGGCTAT CAGAACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCGACACTGCTAG TCGAAAGATACTTTGGCTCAAAATTTGGACTTCTAACAGCGACCCAAAGC TTGTTGGTAAATGGTATCTTCAACATATCATTGAGACGAAAAGGATTTCA AATATGGTTCGTCTTGATAAAGGTACCGAAACAGGTGATCTTGCGGCTAT TCATTGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGACCCTTCATCTG TGATACACTATGGTCCATCAACCTCAAATCAGGTACTTTGTAGGATTAAT TTAAGACACAACAATTGCGAAGTAAAACATCATCTTTTGTCTGAGGTTGA AAACGCAGAAATACTACAATTAAATAGATTACACATTTTTTATAAGAACA CGAAAAGCCTTCAGATGTTCTAGATTTTTTGAACTTTCAGCCTAACAACG TTCTTAAAATGTTCTTATTTTTGGAGGTTTTTATTTCCTAAGAAATTGCA TATTTTGTAGTCTTCAAAGCCTTCAAATGTTCTTGCTATGTACTCCTGTG TACTCAATTTTTTTGGCCCTCAAAGCCAAGAAAAAACCCGTCAATCTCAT TTGAAGACTACAAAATATGCAATTTCTTAGGAAATGGTACCGAAATACTA AAAACATTTCTACAATCATTTTTGGCTTTGCTCAGAGCGTTTTTGAAGGA AATTGCACTTGAAATGTAAGAAAATATTGCTCGTGTAGCCTTAGCTGTCA TAAAGTTTAAGAGAAGGTCAGACTTTGCAGTAAACTGTAGATTGCGTTAC TGCTCGTTTTGAAGGAGATAACAACCTCTCATTTTGTCTTCATCAACTGT TTTTTGAAACTCAAAACCAATTTCAAAATCTTTAAATACATATGTTATTC TCTTTGGTTTATGAAATATTTGAAACACTTTTTTATTGGTATAGATTGAG CGATGGTGGAAAGAACTGCATGAAAGACTAGAGAAATTCTTCAAAGGTCA ACTCCTGTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTGAACAAG ACAGGTAATTTGCTTTACATCAATCTTATTTTCTGCATGCAATAATTGTC CAAAGATGAATATTAAGATCCGATAAAGCTCCGCAACGCATACGTCAAGT TATTGAGGTTCAAATTATTGTTTCATAATGTTCAGTGTTTGATATACCGG GTGCGCCAAAAAAAAGTTTCTCTCTTTAAAACCAATCTTCTAGAAATCTA AAGATTTTAAAAGAACCATTTCTATTTTACTGGAAAGAAGAAAGATAAAC TTAAATTTTGATGTGTCATTTATTAAATTCGATTCATTAGATCAAAAGTT ATGCTCAATTGAATAAAAAAGTTACTTTCGGAAAGTGCTCGAAAACGTTG AAAATCGACCTATCAAATTTTTATATTAAAATTGGTAATCGCAATAACCT TTACATGATTAAAAGCATTATTCAGTGATTAAACACATAAAATTTCGAGA CTGAAAGGCCAAAAGGGTTTAAAATCTTCATCAAAATCACTTTTAATTTA CTTTTACCGAAATTTTCCTCCGATTTTCGGTTTTAGATTGGATAAAGTCT ATGTAAGGCTGGATTTACCTCGAAACCAATATTTTATGTATTTTCATGAA TTTTACCAGATTTTTTTGTCTCTTTCGACGAATTTTCTGCCTTTTATTGA AATTTATCTTTCCTTTACATTACAAAAGGTCATTTAGACAGCTAATTATC ATTTTTAATGACTGAAACGAAGGATAATGATGTATCATGTAATTATGCTT CTGTTTAATTTGATAGGTCGATTTTNAAAGTGATTTTGATGAAGATTTTA AACCCTTTTCGCCTTTCAGTTTCGAAATTTTATGTGTTTAATCACTGAAA AATGCTTTTAATCATGTAAAGGTAATTGCGATTGCCAATTTCAATATAAA AATTTGATAGGTCGATTTTCAACCTTTTTGAGCACTTTCAGAAAGTAACT TTTTTATTCAATTGAGCATAACTTTTGATCTAATGAATCGAATTTAATAA ATGACCCATATAAATTTAAGTTTATCTTTCTTCTTTCCAGTAAAGTAGGA ATGGTTCTTTTAAAATCTTTAGATTTCTAGAAAATTAGTTTTAAAAAGAG AAACTTTTTTGTGGCGCACCCGGTAGAAATATCTGTTCGCCTTTTTAGAC ACCATGTCTGCAAACTGTGGCAAAAACTGTTAAAATTTAAAAGAGTCTTG ACTTTTGGTGGTACCATTCAGTATGCTTTTGTACTTTTAGGATGATTTTA GCCTATATCATGATCCCAATCCTCCAAGCCGAACTTAACACATTCAAAGA TGTCATCTGGAATTGCCATCGCATTAGATATCAAAAAGACCAAGTTTTAC CAGACGGTGTTCCCAACCACATTTATACCGTACCTGAGGTGCATGACCTT GTTGAATGTGGTAAGTTCCAGTCAACTTTTACTCGATTGTTGATGTCTTC AGCTCAGTTTTTGCAAAGATAATCTGTGGCAAATCTTTTTTACAATACTT AGGTATTTGCTTCCAGGCACATACGCTAATCGTTGATCTTTACAGCGTAA TTTTGATGAAGGTACACGCTTTTTTTTATAAGAATAGTGAACTTTGGATG AGGGTCAAATATTCTTAAGAAATTGCCAAAATTGAGGGTGAAATAATTCT TAACGTATTCTTACTTTTTTAGACTTGACTTTTTTACAAACACGAGAAAT GATTTTTTGAGAATTTGGGCTTTGGAATGAACATTTGAAGCTAACATTAC ATTCAGCCTCAAAGTTTAAATTCAAATCTAACAAAGGAAGCAGTTTCTTT CTGATAACCAAATACAAAATGACTACCCAAAATCTGTGTAACTCACACTG AGGGTATTCATAGAGTATTCTAACGATTTGGCCAATTTTCACCCTGATAT TCTTACATAAAAAGCGTGTAGCATAAGTTTTTACTAAACCTCGTAAAGAA ATTTCACTTTAGTAATGAAACATTTTGTGGCGTCTCCGGTACTTTAGACC CCAAGCTTAAAAAAAAGCAATCTTGGAATTTATAAACTCTTTTTTTTATC TCCTCCCCGTGTACTTCTTGACTGACCTTATTCATTGTAGGCTTTGATGT ATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGAATCACACCAG AAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATGTGAACAATAT CTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGGAAGCGTATAT ATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAAGAAACTTAACAAT TAAGTTTTTTTTCTCCATACCGTATTTCCTCTAACTACTTTAATG

Coding sequence (CDS) from alignment at scaffold_208:444182..448076-

>TCONS_00052002 ID=TCONS_00052002|Name=TCONS_00052002|organism=Clytia hemisphaerica|type=CDS|length=5028bp|location=Sequence derived from alignment at scaffold_208:444182..448076- (Clytia hemisphaerica)
GCTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGA
ATCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATG
TGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGG
AAGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAAGAT
GATTTTAGCCTATATCATGATCCCAATCCTCCAAGCCGAACTTAACACAT
TCAAAGATGTCATCTGGAATTGCCATCGCATTAGATATCAAAAAGACCAA
GTTTTACCAGACGGTGTTCCCAACCACATTTATACCGTACCTGAGGTGCA
TGACCTTGTTGAATGTGATTGAGCGATGGTGGAAAGAACTGCATGAAAGA
CTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTTAAAATGTGGCGGACA
TTATGATCCAAGTTGTGAACAAGACAGAACTTTCGTTTTAAGTTTGCTTT
ACATTTCTTTTTTTCAGTTTATCAAATTAAAATGAATACCAACTGGAAAT
ATGAGGGAAAATTGGAGTTGTATGTTGCTCAATGTTTGAAACGAACTGAG
ATTGTTGAACTTATGAAAAAAGAATTTGGCAACTATCCTTGGAGTTTGAG
TACTCTAACCAGGAGATTCAATCATTTTGGAATTAGATATACTGATACTG
AAGTTCCTGTCGAGTCGGTCAGAGAAGCTGTTTCAACTGAACTTCGAGGT
CCAGGGCGACTTTTGGGCTACAGAGCCATGCATAAAAAACTACGTGTTGT
TCATGGTTTGAAAGTTCCTAGGAATCTTGTTCATGATGTTATGTTTTTGG
AAGAAAGTCAATTACTGAAGGACAGAAGACCCTATCAGAAGAAAAAGAGA
GTGAAGGGTCATTTTGTATCAAATGGACCTAATTGGGTACACTCCTTTGA
TGGCCATGATAAGCTTATGGGCTATCAGAACAGCACCTTCCCTCTAGCTG
TGTATGGCTGTATCGACACTGCTAGTCGAAAGATACTTTGGCTCAAAATT
TGGACTTCTAACAGCGACCCAAAGCTTGTTGGTAAATGGTATCTTCAACA
TATCATTGAGACGAAAAGGATTTCAAATATGGTTCGTCTTGATAAAGGTA
CCGAAACAGGTGATCTTGCGGCTATTCATTGTTTTCTGCGTTCCCGTTGT
GACGAAAACTTGGACCCTTCATCTGTGATACACTATGGTCCATCAACCTC
AAATCAGGCTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGA
ATCGGGAATCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGC
ATCTATGTGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAA
TGTCAGGAAGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTT
TTAAGATGATTTTAGCCTATATCATGATCCCAATCCTCCAAGCCGAACTT
AACACATTCAAAGATGTCATCTGGAATTGCCATCGCATTAGATATCAAAA
AGACCAAGTTTTACCAGACGGTGTTCCCAACCACATTTATACCGTACCTG
AGGTGCATGACCTTGTTGAATGTGATTGAGCGATGGTGGAAAGAACTGCA
TGAAAGACTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTTAAAATGTG
GCGGACATTATGATCCAAGTTGTGAACAAGACAGAACTTTCGTTTTAAGT
TTGCTTTACATTTCTTTTTTTCAGTTTATCAAATTAAAATGAATACCAAC
TGGAAATATGAGGGAAAATTGGAGTTGTATGTTGCTCAATGTTTGAAACG
AACTGAGATTGTTGAACTTATGAAAAAAGAATTTGGCAACTATCCTTGGA
GTTTGAGTACTCTAACCAGGAGATTCAATCATTTTGGAATTAGATATACT
GATACTGAAGTTCCTGTCGAGTCGGTCAGAGAAGCTGTTTCAACTGAACT
TCGAGGTCCAGGGCGACTTTTGGGCTACAGAGCCATGCATAAAAAACTAC
GTGTTGTTCATGGTTTGAAAGTTCCTAGGAATCTTGTTCATGATGTTATG
TTTTTGGAAGAAAGTCAATTACTGAAGGACAGAAGACCCTATCAGAAGAA
AAAGAGAGTGAAGGGTCATTTTGTATCAAATGGACCTAATTGGGTACACT
CCTTTGATGGCCATGATAAGCTTATGGGCTATCAGAACAGCACCTTCCCT
CTAGCTGTGTATGGCTGTATCGACACTGCTAGTCGAAAGATACTTTGGCT
CAAAATTTGGACTTCTAACAGCGACCCAAAGCTTGTTGGTAAATGGTATC
TTCAACATATCATTGAGACGAAAAGGATTTCAAATATGGTTCGTCTTGAT
AAAGGTACCGAAACAGGTGATCTTGCGGCTATTCATTGTTTTCTGCGTTC
CCGTTGTGACGAAAACTTGGACCCTTCATCTGTGATACACTATGGTCCAT
CAACCTCAAATCAGGCTTTGATGTATCAGACCAGGATATCCAATCCCTTA
TAGATGAATCGGGAATCACACCAGAAGATGCCGACTACCTTGATGATGAT
TTTAGGCATCTATGTGAACAATATCTACCAAATCTAGAGCTCGTTAAACC
TCATGAATGTCAGGAAGCGTATATATACTTAAAACGAGAGATTGAAAATG
GCAGTTTTTAAGATGATTTTAGCCTATATCATGATCCCAATCCTCCAAGC
CGAACTTAACACATTCAAAGATGTCATCTGGAATTGCCATCGCATTAGAT
ATCAAAAAGACCAAGTTTTACCAGACGGTGTTCCCAACCACATTTATACC
GTACCTGAGGTGCATGACCTTGTTGAATGTGATTGAGCGATGGTGGAAAG
AACTGCATGAAAGACTAGAGAAATTCTTCAAAGGTCAACTCCTGTTCTTA
AAATGTGGCGGACATTATGATCCAAGTTGTGAACAAGACAGAACTTTCGT
TTTAAGTTTGCTTTACATTTCTTTTTTTCAGTTTATCAAATTAAAATGAA
TACCAACTGGAAATATGAGGGAAAATTGGAGTTGTATGTTGCTCAATGTT
TGAAACGAACTGAGATTGTTGAACTTATGAAAAAAGAATTTGGCAACTAT
CCTTGGAGTTTGAGTACTCTAACCAGGAGATTCAATCATTTTGGAATTAG
ATATACTGATACTGAAGTTCCTGTCGAGTCGGTCAGAGAAGCTGTTTCAA
CTGAACTTCGAGGTCCAGGGCGACTTTTGGGCTACAGAGCCATGCATAAA
AAACTACGTGTTGTTCATGGTTTGAAAGTTCCTAGGAATCTTGTTCATGA
TGTTATGTTTTTGGAAGAAAGTCAATTACTGAAGGACAGAAGACCCTATC
AGAAGAAAAAGAGAGTGAAGGGTCATTTTGTATCAAATGGACCTAATTGG
GTACACTCCTTTGATGGCCATGATAAGCTTATGGGCTATCAGAACAGCAC
CTTCCCTCTAGCTGTGTATGGCTGTATCGACACTGCTAGTCGAAAGATAC
TTTGGCTCAAAATTTGGACTTCTAACAGCGACCCAAAGCTTGTTGGTAAA
TGGTATCTTCAACATATCATTGAGACGAAAAGGATTTCAAATATGGTTCG
TCTTGATAAAGGTACCGAAACAGGTGATCTTGCGGCTATTCATTGTTTTC
TGCGTTCCCGTTGTGACGAAAACTTGGACCCTTCATCTGTGATACACTAT
GGTCCATCAACCTCAAATCAGGCTTTGATGTATCAGACCAGGATATCCAA
TCCCTTATAGATGAATCGGGAATCACACCAGAAGATGCCGACTACCTTGA
TGATGATTTTAGGCATCTATGTGAACAATATCTACCAAATCTAGAGCTCG
TTAAACCTCATGAATGTCAGGAAGCGTATATATACTTAAAACGAGAGATT
GAAAATGGCAGTTTTTAAGATGATTTTAGCCTATATCATGATCCCAATCC
TCCAAGCCGAACTTAACACATTCAAAGATGTCATCTGGAATTGCCATCGC
ATTAGATATCAAAAAGACCAAGTTTTACCAGACGGTGTTCCCAACCACAT
TTATACCGTACCTGAGGTGCATGACCTTGTTGAATGTGATTGAGCGATGG
TGGAAAGAACTGCATGAAAGACTAGAGAAATTCTTCAAAGGTCAACTCCT
GTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTGAACAAGACAGAA
CTTTCGTTTTAAGTTTGCTTTACATTTCTTTTTTTCAGTTTATCAAATTA
AAATGAATACCAACTGGAAATATGAGGGAAAATTGGAGTTGTATGTTGCT
CAATGTTTGAAACGAACTGAGATTGTTGAACTTATGAAAAAAGAATTTGG
CAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAGATTCAATCATTTTG
GAATTAGATATACTGATACTGAAGTTCCTGTCGAGTCGGTCAGAGAAGCT
GTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTGGGCTACAGAGCCAT
GCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGTTCCTAGGAATCTTG
TTCATGATGTTATGTTTTTGGAAGAAAGTCAATTACTGAAGGACAGAAGA
CCCTATCAGAAGAAAAAGAGAGTGAAGGGTCATTTTGTATCAAATGGACC
TAATTGGGTACACTCCTTTGATGGCCATGATAAGCTTATGGGCTATCAGA
ACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCGACACTGCTAGTCGA
AAGATACTTTGGCTCAAAATTTGGACTTCTAACAGCGACCCAAAGCTTGT
TGGTAAATGGTATCTTCAACATATCATTGAGACGAAAAGGATTTCAAATA
TGGTTCGTCTTGATAAAGGTACCGAAACAGGTGATCTTGCGGCTATTCAT
TGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGACCCTTCATCTGTGAT
ACACTATGGTCCATCAACCTCAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032918XLOC_032918Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052002-exon-scaffold_208-1575043694:447295..448076TCONS_00052002-exon-scaffold_208-1575043694:447295..448076Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1575043694:446523..446632TCONS_00052002-exon-scaffold_208-1575043694:446523..446632Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1575043694:445117..445286TCONS_00052002-exon-scaffold_208-1575043694:445117..445286Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1575043694:444182..444436TCONS_00052002-exon-scaffold_208-1575043694:444182..444436Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1510915933:447295..448076TCONS_00052002-exon-scaffold_208-1510915933:447295..448076Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1510915933:446523..446632TCONS_00052002-exon-scaffold_208-1510915933:446523..446632Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1510915933:445117..445286TCONS_00052002-exon-scaffold_208-1510915933:445117..445286Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1510915933:444182..444436TCONS_00052002-exon-scaffold_208-1510915933:444182..444436Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1491911889:447295..448076TCONS_00052002-exon-scaffold_208-1491911889:447295..448076Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1491911889:446523..446632TCONS_00052002-exon-scaffold_208-1491911889:446523..446632Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1491911889:445117..445286TCONS_00052002-exon-scaffold_208-1491911889:445117..445286Clytia hemisphaericaexon
TCONS_00052002-exon-scaffold_208-1491911889:444182..444436TCONS_00052002-exon-scaffold_208-1491911889:444182..444436Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052002-proteinTCONS_00052002-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_208supercontigscaffold_208:444182..448076 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.544334 0.554013 0.0362543 0.177346 6.94342 6.5461 5.34748 5.20282 4.15891 5.80915 3.72472 4.16074 2.12359 1.76923 1.83509 1.76739 2.55025 2.17551 1.52451 2.66099 3.34694 3.95844 1.22241 2.41461 0.756317 0.951129 3.6045 2.42861 1.52457 1.03253
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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