TCONS_00051902 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051902
Unique NameTCONS_00051902
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051902 ID=TCONS_00051902|Name=TCONS_00051902|organism=Clytia hemisphaerica|type=transcript|length=137bp
GATAAACACGATTCGGAGAAATGCAAAAAGTGGGCCAAAGAGAAATTCTG
TACAaaggataaaaacaaaaagtggATGGCTCAAAATTGTTGCTTCTCTT
GCAAGACTTATGGTTTTTAAATGGAACAGAAATATGG
Run BLAST on NCBI

transcript from alignment at scaffold_206:81279..81628-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051902 ID=TCONS_00051902|Name=TCONS_00051902|organism=Clytia hemisphaerica|type=transcript|length=350bp|location=Sequence derived from alignment at scaffold_206:81279..81628- (Clytia hemisphaerica)
GATAAACACGATTCGGAGAAATGCAAAAAGTGGGCCAAAGAGAAATTCTG
TACAAAGGATAAAAACAAAAAGTGGATGGCTCAAAATTGTTGCTTCTCTT
GCAAGGTAAGATTAAGACTTCGGCAATTTGCTAGAAATACCTTCTCAGAA
ATCTTTCGTCGACTACTATACGACATTTTGAATTCATAATATTCAAATTT
CATAATTATAAAGATCGGAATTAACGAAATTGTTATACGCCAAACTTGAG
TTGAGAACATGGAAAGCATCGTATTTTTTGGCTTCTACCTTTTTTTAACT
TGTATTTCCAATTTTCAGACTTATGGTTTTTAAATGGAACAGAAATATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032852XLOC_032852Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051902-exon-scaffold_206-1575043694:81524..81628TCONS_00051902-exon-scaffold_206-1575043694:81524..81628Clytia hemisphaericaexon
TCONS_00051902-exon-scaffold_206-1575043694:81279..81310TCONS_00051902-exon-scaffold_206-1575043694:81279..81310Clytia hemisphaericaexon
TCONS_00051902-exon-scaffold_206-1510915933:81524..81628TCONS_00051902-exon-scaffold_206-1510915933:81524..81628Clytia hemisphaericaexon
TCONS_00051902-exon-scaffold_206-1510915933:81279..81310TCONS_00051902-exon-scaffold_206-1510915933:81279..81310Clytia hemisphaericaexon
TCONS_00051902-exon-scaffold_206-1491911889:81524..81628TCONS_00051902-exon-scaffold_206-1491911889:81524..81628Clytia hemisphaericaexon
TCONS_00051902-exon-scaffold_206-1491911889:81279..81310TCONS_00051902-exon-scaffold_206-1491911889:81279..81310Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_206supercontigscaffold_206:81279..81628 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00051902 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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