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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051552 ID=TCONS_00051552|Name=TCONS_00051552|organism=Clytia hemisphaerica|type=transcript|length=2561bp
caaaaatggtagacgccgttcaaaaaaataccaaaccaagaaacattact
tttttaacttttggaataaataatatctttctgaaaatttacttttttta
tgtttcctggtaaattttattttatttttaaaacttttctttgagATCAA
TTGAGGTTTTTTTTGTTGCAATTGATGCAAAGATGAGATTTTTACTTTGG
TATTTCGTTCTTGTTGTTTTGGTCATCAAACATGATATTAATTGCAAACA
TCATCGATCAAGACAGTCAAAGAAATCAATCATTCCCAAATCACCAAAAA
TCACTCACCAACAACAATCATCACACTTTTCACATAATCTTCCATGGAAA
GAGATCTCTAAAAAATCGTTGATCGATTCAAATCCTTCAGAGGATACCGA
AACAATGCAAAAACAAAAGAGAGGTTTTCTTGCGAATCTGGCTAATTTAC
TAAACGATGCTGAGTCAATCTCATCTCATAAGGAAACTGAGACAAAAGTA
CCAAGTATCGATGAGGCTCACGAAAAGAAGGCTGTCGTAGAAAGCCACGA
AGAAACCCCAATATCAAAACCTAAACACGAAGAAAATAGCGATAAGAAAG
ATGTGATCGATCTATCGGCACTTAAAGACTCTATCAAAGCAGATTCTTCT
GATTTTGCACCAATCTTTGCCATGTATCATGGTAAAGTTGTTGAGCTTGG
TAAATTACCAGAAAGCTCTTTTAAGAAGAGTCATCAAACTTCAGATGTTA
CTTTGCCAGAACATCATGCGAAAGACGTCACAGCTTCAAAACGTGTCTTG
GATGAGACGACAAGTCACAAAATGGACGTCACTCCCGTCAAACGTGAATA
CCATTCATCGACTCCAGATCAACTGAAAACTTACCTCAATACCATGGCTG
GTGGTTCAGATCAACAGAACAGCATTACCAAAGATACAATATCAATACCC
AACTTAGAATCTGGAATTAAGGGAGATTTAATCAACCATGTCAAAGGAGT
CGTGTTAGATGATGGTAAAGTCGTATCTGTCAGCAATAATCATTTATTTG
ATAACAATAATGATGTCTCTAAAGTACAATCAGACCCAGTGCAACAAGAT
GTCCAACAGAAGTTCATGGTTAATAAAGAAGGCAATGTGGAACCATTGGT
TAAAGAAAAAGTGGAAACTGCCGATGCTGTAACCAGGGATAACTTAGGGA
ATGGTCAGAAAACTGTGACACTGACTGTTGATGTTTTGAAGCAACTATTG
AAGAAAACAGGAGATTCAAAAGTTTCTTTGGCACAATTGCTGAATAAACC
AAACGAAGCTGAGCAAAGAAGCAATACTCAAGAAGATGAAGACCCAGGCA
CCATTGAAGATTTTGCTGCTGGTGGATTGAAAGCACACAACGAATACCGT
AGCAAGCATCATGATGACAATGTGATCTGGTCAGACTCACTAGCTGCGAA
AGCACAAAAGCTAGCTGAAGCTTTAGCTGATAAAAAATCATTAGAAATTG
CCAAAGATCTTGAAAAAGAAGGGATGGGAGAAAACGTAGCCAAGGTTTGG
GCGACTTTTAAAAATGCTGGTGAAGCAGCAACTAAAATGTGGTATAGCCA
GAGTGAAAACTACCATTTTGATGATCCGCATTTAGACGAAAATACAGGGC
AATTTGCACAGGTTGTTTGGAAATCAACCAAAGAACTTGGCATGGGTGTA
GCTAAAAGTATTGATGATGTGAACAATAAATATGTTTATGTAACAGCTTT
GTATAGTCCTCCAGGAAATATTGAAGCTGTGTTGAGAGACAATGTTTTAC
CTACTGGTAATAACACACAAGATGTTTattcaactttctttaaaaggACT
GGTGTTATAAACCATGAGCCTGCTGTTGTTCGAAGGTCAAGGCTACCAAA
GAGTAAGAAAGCGAAAAAGATTGTTGCACCTTGAAGATTATAAGCTTTGA
TTTTAAACTATCGACCACATAATCCTTTGAGAGGGTAAGAAGGAGTACAG
AGGGACACTGATTACACTTCTAATCTCTGAATTATTCCATGAGGACTTTC
ACTTATGAACGATAAAATTATTACACATTTGGAACTCAGAGTACTCTGTG
GGAATACTGTTTATTTGCCAAATAAAAGGAACACTGATTATATTCCAGTC
GTAAATGGAGACTGATTTCTTTGCTTTATTTGATGGATTAATTGAATTAA
ACAGATGAACAATTATATGTTTATTATGATTTGATGTAGCTGTGTTTCAG
CTACAAAAACAGTTAAGGATACTCCTAGCCATTAACAGTGACTTTGATGT
CAATCTATTtatcataaattttcaaaaagacaaaggaggattaaagaaaa
atattgattaaGGATGTTTATTtatacaatcgaatgttttattTGTGGTA
ATAATACTACAATTTTAATCACTTAATGTTCAGGCAGTGAGTCCTAACAG
GCAATTTTCTTGTTATGCTATTTTTGTGCAGTTTCAGCTCATCATAAGTC
CAATCAAAAGCTCCAAATCTGGCTAAAATCATAGTTTATTTTAAGCATAG
CGATATCAGTG Run BLAST on NCBI protein sequence of TCONS_00051552-protein >TCONS_00051552-protein ID=TCONS_00051552-protein|Name=TCONS_00051552-protein|organism=Clytia hemisphaerica|type=polypeptide|length=583bp
MRFLLWYFVLVVLVIKHDINCKHHRSRQSKKSIIPKSPKITHQQQSSHFS
HNLPWKEISKKSLIDSNPSEDTETMQKQKRGFLANLANLLNDAESISSHK
ETETKVPSIDEAHEKKAVVESHEETPISKPKHEENSDKKDVIDLSALKDS
IKADSSDFAPIFAMYHGKVVELGKLPESSFKKSHQTSDVTLPEHHAKDVT
ASKRVLDETTSHKMDVTPVKREYHSSTPDQLKTYLNTMAGGSDQQNSITK
DTISIPNLESGIKGDLINHVKGVVLDDGKVVSVSNNHLFDNNNDVSKVQS
DPVQQDVQQKFMVNKEGNVEPLVKEKVETADAVTRDNLGNGQKTVTLTVD
VLKQLLKKTGDSKVSLAQLLNKPNEAEQRSNTQEDEDPGTIEDFAAGGLK
AHNEYRSKHHDDNVIWSDSLAAKAQKLAEALADKKSLEIAKDLEKEGMGE
NVAKVWATFKNAGEAATKMWYSQSENYHFDDPHLDENTGQFAQVVWKSTK
ELGMGVAKSIDDVNNKYVYVTALYSPPGNIEAVLRDNVLPTGNNTQDVYS
TFFKRTGVINHEPAVVRRSRLPKSKKAKKIVAP Run BLAST on NCBI transcript from alignment at scaffold_202:1051879..1056051+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051552 ID=TCONS_00051552|Name=TCONS_00051552|organism=Clytia hemisphaerica|type=transcript|length=4173bp|location=Sequence derived from alignment at scaffold_202:1051879..1056051+ (Clytia hemisphaerica)
caaaaatggtagacgccgttcaaaaaaataccaaaccaagaaacattact
tttttaacttttggaataaataatatctttctgaaaatttacttttttta
tgtttcctggtaaattttattttatttttaaaacttttctttgagATCAA
TTGAGGTTTTTTTTGTTGCAATTGATGCAAAGATGAGATTTTTACTTTGG
TATTTCGTTCTTGTTGTTTTGGTCATCAAACATGATATTAATTGtaagta
ttttcaaaattataaaacGTTCTCATTCTACAAGTCATTTTCTAGATGAA
TTCTTTGATGCTCCATAGCCGTTCAATGTACTAATAAGCCTTCTAGTTTT
TGTAAATAACTATCGATCGATAACTTTCCttagacccccccccctaatac
CGTGCCGCTGCCTCAAGCCCTACCTCGGGGGGGGGGGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTATGCGATtattca
tgcatatattatgacgtaaaagagaaaataacaataggagacgaagtaag
gatatgtgacgaagtagtgctatgcacaggggggcgtacggggtttgcga
tttccgaaataccgaataatttagccaaaatttccgagattccgtaaaaa
aatacttgcaattccgataccgaatttttcctcgttttgactaattttcc
attaaatttgatttttcatgtatgaattccgaaaaagggggataaaaact
ttataataccgaaatttcgaagcaaaaattcatggatttccgatactgaa
agaatttcagaattccgaaataccgaaggaattttccccgatttccgaaa
ttccgaagaaaaaagggtcgatttccgcaattccgaaataccgtacgccc
cccactacCTCCTAGGGAATTTTTATCCTCCTCTCTTTCCTTATCTTGTT
ACCAATCTTACGATTATTCGGGACTCTCTCTCTCATTAAATTATTTAATC
AATACTTAATAGGCAAACATCATCGATCAAGACAGTCAAAGAAATCAATC
ATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACACTTTTC
ACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATTCAA
ATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTATTGTA
TTTTTTCTCGCTTTATTAATTTTGTATTACCTTTCCTTTCAATAGATCTT
TATCCGTAGATATTATATTCTTTTGCACACTAAAAAGCCAGTTTTGAAGT
CGACTTTTCTGTCATGTCTGGTCATGTTTGTCTCTTTTTTACCTTAGATT
GTCGAACGTTTGTATATAAACATTCGAATCCCGTAGTTCATCAACAGAAT
AGAATAGAAAGGTAGAATAGTCGGTTCAAAATAAGCTAGAAACGATTCCG
TTATTTTAAGAAGCCCAGTTCATTAAAGTAGTTGGAGATTAGTGCTTTTG
TCCCTATCTTCAAGTTTTAATCTCTAGCCAAGAGCATTTTTAGGGAGATT
GAAATGCTCAAATATTTGAACTATATTTTCTTTATGTTTCAGGTTTTCTT
GCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCTCATAA
GGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGAAGG
CTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAACACGAA
GAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGACTC
TATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTATCATG
GTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAGAGT
CATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGACGTCAC
AGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGACGTCA
CTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGAAAACT
TACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATTACCAA
AGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGATTTAA
TCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCTGTC
AGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTACAATC
AGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAGAAG
GCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCTGTA
ACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGTTGA
TGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTTTGG
CACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACTCAA
GAAGATGAAGACCCAGGTCCGTTATCGTGTTTTGATTTCTAGTAGAAAAC
GAAATTAAACATTCTTATTATAAGATACATCATAAGATAACttagccaaa
atttcgtcccgttGAGAAGAAACATACCCTataattttacccccactgcg
aaattgactttttattcTCATTTGAAGTTCAATGGAAAAGAAAACCCTcg
aaaccatccccactgggttttttaaaGCTTGGAATTGTAACAATAAAGTT
TCTTTCCACATTCGGATTTcggtagaaattttcatcccaactgtgggaaa
aagttccaccagcACTGAGAAAAGGTGTAAAATGTTTTTACAATCTCCGT
CATGTTTTGGATTTATGAAACGCCCCttatttactcaaaatttaattGAT
GTAATCAATGTTTAGCGTTAGCGTTTTTTAATAAATCTTATCATTACTTT
TCCTTTCAGGCACCATTGAAGATTTTGCTGCTGGTGGATTGAAAGCACAC
AACGAATACCGTAGCAAGCATCATGATGACAATGTGATCTGGTCAGACTC
ACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGATAAAAAAT
CATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAGAAAACGTA
GCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCAACTAAAAT
GTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCATTTAGACG
AAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCAAAGAACTT
GGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAATATGTTTA
TGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGTGTTGAGAG
ACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTattcaactttc
tttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTGTTCGAAGGTC
AAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACCTTGAAGAT
TATAAGCTTTGATTTTAAACTATCGACCACATAATCCTTTGAGAGGGTAA
GAAGGAGTACAGAGGGACACTGATTACACTTCTAATCTCTGAATTATTCC
ATGAGGACTTTCACTTATGAACGATAAAATTATTACACATTTGGAACTCA
GAGTACTCTGTGGGAATACTGTTTATTTGCCAAATAAAAGGAACACTGAT
TATATTCCAGTCGTAAATGGAGACTGATTTCTTTGCTTTATTTGATGGAT
TAATTGAATTAAACAGATGAACAATTATATGTTTATTATGATTTGATGTA
GCTGTGTTTCAGCTACAAAAACAGTTAAGGATACTCCTAGCCATTAACAG
TGACTTTGATGTCAATCTATTtatcataaattttcaaaaagacaaaggag
gattaaagaaaaatattgattaaGGATGTTTATTtatacaatcgaatgtt
ttattTGTGGTAATAATACTACAATTTTAATCACTTAATGTTCAGGCAGT
GAGTCCTAACAGGCAATTTTCTTGTTATGCTATTTTTGTGCAGTTTCAGC
TCATCATAAGTCCAATCAAAAGCTCCAAATCTGGCTAAAATCATAGTTTA
TTTTAAGCATAGCGATATCAGTG Coding sequence (CDS) from alignment at scaffold_202:1051879..1056051+ >TCONS_00051552 ID=TCONS_00051552|Name=TCONS_00051552|organism=Clytia hemisphaerica|type=CDS|length=7008bp|location=Sequence derived from alignment at scaffold_202:1051879..1056051+ (Clytia hemisphaerica)
ATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCAAACA
TGATATTAATTGCAAACATCATCGATCAAGACAGTCAAAGAAATCAATCA
TTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACACTTTTCA
CATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATTCAAA
TCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTTTTCTTG
CGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCTCATAAG
GAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGAAGGC
TGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAACACGAAG
AAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGACTCT
ATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTATCATGG
TAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAGAGTC
ATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGACGTCACA
GCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGACGTCAC
TCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGAAAACTT
ACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATTACCAAA
GATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGATTTAAT
CAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCTGTCA
GCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTACAATCA
GACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAGAAGG
CAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCTGTAA
CCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGTTGAT
GTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTTTGGC
ACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACTCAAG
AAGATGAAGACCCAGGCACCATTGAAGATTTTGCTGCTGGTGGATTGAAA
GCACACAACGAATACCGTAGCAAGCATCATGATGACAATGTGATCTGGTC
AGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGATA
AAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAGAA
AACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCAAC
TAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCATT
TAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCAAA
GAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAATA
TGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGTGT
TGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTattca
actttctttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTGTTCG
AAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACCTT
GAATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCAAA
CATGATATTAATTGCAAACATCATCGATCAAGACAGTCAAAGAAATCAAT
CATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACACTTTT
CACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATTCA
AATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTTTTCT
TGCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCTCATA
AGGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGAAG
GCTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAACACGA
AGAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGACT
CTATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTATCAT
GGTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAGAG
TCATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGACGTCA
CAGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGACGTC
ACTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGAAAAC
TTACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATTACCA
AAGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGATTTA
ATCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCTGT
CAGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTACAAT
CAGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAGAA
GGCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCTGT
AACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGTTG
ATGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTTTG
GCACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACTCA
AGAAGATGAAGACCCAGGCACCATTGAAGATTTTGCTGCTGGTGGATTGA
AAGCACACAACGAATACCGTAGCAAGCATCATGATGACAATGTGATCTGG
TCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGA
TAAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAG
AAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCA
ACTAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCA
TTTAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCA
AAGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAA
TATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGT
GTTGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTatt
caactttctttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTGTT
CGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACC
TTGAATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCA
AACATGATATTAATTGCAAACATCATCGATCAAGACAGTCAAAGAAATCA
ATCATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACACTT
TTCACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATT
CAAATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTTTT
CTTGCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCTCA
TAAGGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGA
AGGCTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAACAC
GAAGAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGA
CTCTATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTATC
ATGGTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAG
AGTCATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGACGT
CACAGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGACG
TCACTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGAAA
ACTTACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATTAC
CAAAGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGATT
TAATCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCT
GTCAGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTACA
ATCAGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAG
AAGGCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCT
GTAACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGT
TGATGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTT
TGGCACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACT
CAAGAAGATGAAGACCCAGGCACCATTGAAGATTTTGCTGCTGGTGGATT
GAAAGCACACAACGAATACCGTAGCAAGCATCATGATGACAATGTGATCT
GGTCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCT
GATAAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGG
AGAAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAG
CAACTAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCG
CATTTAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAAC
CAAAGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATA
AATATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCT
GTGTTGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTa
ttcaactttctttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGTTG
TTCGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCA
CCTTGAATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCAT
CAAACATGATATTAATTGCAAACATCATCGATCAAGACAGTCAAAGAAAT
CAATCATTCCCAAATCACCAAAAATCACTCACCAACAACAATCATCACAC
TTTTCACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTGATCGA
TTCAAATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAGAGGTT
TTCTTGCGAATCTGGCTAATTTACTAAACGATGCTGAGTCAATCTCATCT
CATAAGGAAACTGAGACAAAAGTACCAAGTATCGATGAGGCTCACGAAAA
GAAGGCTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAAAACCTAAAC
ACGAAGAAAATAGCGATAAGAAAGATGTGATCGATCTATCGGCACTTAAA
GACTCTATCAAAGCAGATTCTTCTGATTTTGCACCAATCTTTGCCATGTA
TCATGGTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGA
AGAGTCATCAAACTTCAGATGTTACTTTGCCAGAACATCATGCGAAAGAC
GTCACAGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCACAAAATGGA
CGTCACTCCCGTCAAACGTGAATACCATTCATCGACTCCAGATCAACTGA
AAACTTACCTCAATACCATGGCTGGTGGTTCAGATCAACAGAACAGCATT
ACCAAAGATACAATATCAATACCCAACTTAGAATCTGGAATTAAGGGAGA
TTTAATCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTAT
CTGTCAGCAATAATCATTTATTTGATAACAATAATGATGTCTCTAAAGTA
CAATCAGACCCAGTGCAACAAGATGTCCAACAGAAGTTCATGGTTAATAA
AGAAGGCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATG
CTGTAACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTGACACTGACT
GTTGATGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTCAAAAGTTTC
TTTGGCACAATTGCTGAATAAACCAAACGAAGCTGAGCAAAGAAGCAATA
CTCAAGAAGATGAAGACCCAGGCACCATTGAAGATTTTGCTGCTGGTGGA
TTGAAAGCACACAACGAATACCGTAGCAAGCATCATGATGACAATGTGAT
CTGGTCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAG
CTGATAAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATG
GGAGAAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGC
AGCAACTAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATC
CGCATTTAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCA
ACCAAAGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAA
TAAATATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAG
CTGTGTTGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTT
TattcaactttctttaaaaggACTGGTGTTATAAACCATGAGCCTGCTGT
TGTTCGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTG
CACCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051552-exon-scaffold_202-1491911889:1051879..1052121 | TCONS_00051552-exon-scaffold_202-1491911889:1051879..1052121 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1510915933:1051879..1052121 | TCONS_00051552-exon-scaffold_202-1510915933:1051879..1052121 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1575043694:1051879..1052121 | TCONS_00051552-exon-scaffold_202-1575043694:1051879..1052121 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1491911889:1052891..1053070 | TCONS_00051552-exon-scaffold_202-1491911889:1052891..1053070 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1510915933:1052891..1053070 | TCONS_00051552-exon-scaffold_202-1510915933:1052891..1053070 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1575043694:1052891..1053070 | TCONS_00051552-exon-scaffold_202-1575043694:1052891..1053070 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1491911889:1053471..1054394 | TCONS_00051552-exon-scaffold_202-1491911889:1053471..1054394 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1510915933:1053471..1054394 | TCONS_00051552-exon-scaffold_202-1510915933:1053471..1054394 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1575043694:1053471..1054394 | TCONS_00051552-exon-scaffold_202-1575043694:1053471..1054394 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1491911889:1054838..1056051 | TCONS_00051552-exon-scaffold_202-1491911889:1054838..1056051 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1510915933:1054838..1056051 | TCONS_00051552-exon-scaffold_202-1510915933:1054838..1056051 | Clytia hemisphaerica | exon |
| TCONS_00051552-exon-scaffold_202-1575043694:1054838..1056051 | TCONS_00051552-exon-scaffold_202-1575043694:1054838..1056051 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_202 | supercontig | scaffold_202:1051879..1056051 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00051552 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 2.538e-18 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 3
Query: 1377 LKAHNEYRSKHHDDNVIWSDSXXXXXXXXXXXXXXXXSLEIAKDLEKEGMGENVAKVWATFKNAGEAATKMWYSQSENYHFDDPHLDENTGQFAQVVWKSTKELGMGVAKSIDDVNNKYVYVTALYSPPGNI--EAVLRDNVLP 1802
LKAHNEYR KH + +L +AQ+ +EALA + L+ + + + GEN+A WA++ G+ WYS+ +NY+F P TG F +VWK+TK++G+G A + D + +V A Y P GN+ E +NVLP
Sbjct: 14 LKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLA--WASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSS----FVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
|
