|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00051379 ID=TCONS_00051379|Name=TCONS_00051379|organism=Clytia hemisphaerica|type=transcript|length=399bp
TACCTGTAATAGCTGAAGGTTGAGCTTCTTCTTTAATGGTTGTGATAGAA
GTTGTAGATGGCGCAGACTGTTGCTGTTGTCCTGTGTCAGACTTTCTATC
AGATGATTTATTGGCAACAGTACTCGAAGAAGAAGTGACCTCTGAAGAAG
AAGGGGAAGAAGAAGAATCGACTTTCTTGGTGGTCTGTTCAGTCTTCAAC
TGTCTTTCTGTTGTCGTCTGTTCCTTCTATAAAAAACAAGGTCTCCAACG
AGTTATTTCTAATGTTGTCAAAATTATACTATCTGTTATGAAAAATTCTG
CACTAATAGACATTGGAAAATGAAAGTAACATataaaacttttgattgga
aaaaCCTTTGGCAGTTTGACGGTCTACTGGTAATTTTGAAGAGAgaata Run BLAST on NCBI transcript from alignment at scaffold_201:211316..212573+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00051379 ID=TCONS_00051379|Name=TCONS_00051379|organism=Clytia hemisphaerica|type=transcript|length=1258bp|location=Sequence derived from alignment at scaffold_201:211316..212573+ (Clytia hemisphaerica)
TACCTGTAATAGCTGAAGGTTGAGCTTCTTCTTTAATGGTTGTGATAGAA
GTTGTAGATGGCGCAGACTGTTGCTGTTGTCCTGTGTCAGACTTTCTATC
AGATGATTTATTGGCAACAGTACTCGAAGAAGAAGATGTAACCTggattt
aaaaaataaacatgttgaaaaataaaagagcTTACAAAATACACAGCTAC
ATACTTTTATTTCAATAGGCTTGCTTACGAATTTTAATTGTATGTTacga
tttgttttgttttattttataaattctTATTTGAAAATCGCGTATAATAA
ACattaacttatttattcaaATAACATTTAGTTCAAGCGGGAAAGGTTGC
TTTCCTCCGCTAAAATGTACAAATCATTAAAGTCTTTTTCATTTGCCACC
TTAAGTGAATAGAGTCCGTGACCCTCGCAAACACAAGAGGCAAGATCTCA
ATAGGCTAAAGTTTAGTTTTGTAAGGATCTAATTTACAGTTAGATTGTAA
ATCCATCCTTTTTTTCCCGCAAATTTGCTTACGAATTGACGTCGCAAAAT
TTCGAGGGTTCTAAGGGGTTTCGCAAAAGGGAGCTGAAATAGTCAACCTG
AGCCTTAAATTCAagagaacaaaaacaaaaataatgcgcattttaagtaa
agaaacgaattaagaatatattaagaacaatttaaagtCTGgacattttt
aaagaaatacacttttttataagaacaagctatataagaacgtaaggctt
cgctggccaaaatgttaagaacaagttaagaacattttaagactttgtgg
actcaaaaacacccgatttcttaggaaaatggtcaattaTGTTCACAAAa
gggtcaaaataagaacatgtaaagtacatttttaggcttgaaaatcaaaa
agttaagagcatccgaaggcttcaaaaattttggatattcttgtaaaaaa
caacgtgtatgcGCAGCTGAGAACTGGTAAAAACAAGTGTAAACTGACCT
CTGAAGAAGAAGGGGAAGAAGAAGAATCGACTTTCTTGGTGGTCTGTTCA
GTCTTCAACTGTCTTTCTGTTGTCGTCTGTTCCTTCTATAAAAAACAAGG
TCTCCAACGAGTTATTTCTAATGTTGTCAAAATTATACTATCTGTTATGA
AAAATTCTGCACTAATAGACATTGGAAAATGAAAGTAACATataaaactt
ttgattggaaaaaCCTTTGGCAGTTTGACGGTCTACTGGTAATTTTGAAG
AGAgaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00051379-exon-scaffold_201-1491911889:211316..211450 | TCONS_00051379-exon-scaffold_201-1491911889:211316..211450 | Clytia hemisphaerica | exon |
| TCONS_00051379-exon-scaffold_201-1510915933:211316..211450 | TCONS_00051379-exon-scaffold_201-1510915933:211316..211450 | Clytia hemisphaerica | exon |
| TCONS_00051379-exon-scaffold_201-1575043694:211316..211450 | TCONS_00051379-exon-scaffold_201-1575043694:211316..211450 | Clytia hemisphaerica | exon |
| TCONS_00051379-exon-scaffold_201-1491911889:212310..212573 | TCONS_00051379-exon-scaffold_201-1491911889:212310..212573 | Clytia hemisphaerica | exon |
| TCONS_00051379-exon-scaffold_201-1510915933:212310..212573 | TCONS_00051379-exon-scaffold_201-1510915933:212310..212573 | Clytia hemisphaerica | exon |
| TCONS_00051379-exon-scaffold_201-1575043694:212310..212573 | TCONS_00051379-exon-scaffold_201-1575043694:212310..212573 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_201 | supercontig | scaffold_201:211316..212573 + |
Blast
The following BLAST results are available for this feature:
|
