TCONS_00051329 (transcript) - C. hemisphaerica

Overview
NameTCONS_00051329
Unique NameTCONS_00051329
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1991

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00051329 ID=TCONS_00051329|Name=TCONS_00051329|organism=Clytia hemisphaerica|type=transcript|length=1991bp
ttAGCAGCTCCCGCACCatttttcttcgaattttgTAAATACTAGAATTA
TTAATAGCAAGAAAGATATAGCAAACTcgatatgtatttttttttaattg
ttaatGTATATTTTTGGATAATTAATTGAGTAATCCTATTATTGTATTAA
accatttattttttataaatttgaagaGGAATTTTAGCTTTGTTTTAAGT
GCCTATTCACATAAAAAAGTTATATTTATAAATCTACTCGACCCAGGCCA
GCTCTCTGGTCTTTCCCACCATCCGCAGCCACAATCATTTCAGCTCGACA
TTTTTGGCACTTGTCGGTCACTAGCATATTCACTTTCGAGAAAATAATTT
CGGTGGGCTATTTTCCACTTTTAATACAGAGTACATTTATTTCTTGTTTG
TGCAAGGACCTTAACCAAAGAAGACCTTAAGAAGCTGTATGAGTCAGAAA
ACCCAAAAACCAACATTAACAGGACAGCGGATCAAGACCCGCAAAAGGGA
TGAAAAGGAGAAGTACGATCCAAGTAGTTTCAGAGATCAGATTGTAGCCG
GCCTGAATGAAGTTAATGCAGATCTTGAACTAgcttcaaagttcctgatc
CAATCTGGAAGTAAACTTGATTTCCGACGTTACGCTGAGGCACTACTAGA
CATTCTTATCACTGGTGGCATCCTTGCCCCTGGTGGTACGATAGTGACCG
ACAATGCTGCCATCTCAAGCATCTGTGTGTTCAACACAGAACAAGATGTG
GACAACATGCGTAATGTCATCCAGCTTTTTGAGCGTATGATCCGCCAGTA
CAAATACCTTGAAAAATCTCTTGATGATGAGATGAAAAAGaTATTGATGT
TTCTGAAAGGTTTCACCGATGTGCAGCGTGATCGATTAACCCTTGCTACC
TACCTACTCATCTCATCAAGTCTTATCCAACCTACTTGCctcattcaaat
tttgaatgatCATTTGGTCAATGAAGGTATTGCATTGGAGTTTGCAAGAT
GCTTTTTCAGCGCTTGGCTTGCAGAAAAAGATGCACCTGGATTGATCAAC
ATTCTTAAGAAAGCTGAGATGGATGGAAAACTCATGATGCTGTTTCCAGT
GCACAAACGATCCATTGAaacctttgaaaattatttcaatgaaGCTGACC
TGAAGCCAATTGTCGATTTCCAGCGCAATCAAAATGCACGTATAGTAACA
AAAGAGATGAAATCACGAATCAAAAGATTACTTGAGGATGAATCTACTGC
TGAAGAGATAACCAGTTACATGCAAGAAACTTGcgagaaaaacaaaattg
aaaacttgGACATCATCCCACTGTTGTGGTCGAGTTTGATGAAAGGTGTC
GAATGGAACAAGAAGGAGGACTTATTGGCTGAACAAATTCTTCGTCATTT
GAAAACATACGCTTCAGTTCTCCAAAGGTTCACTACCACTCCTGCTACCG
AACTATTGTTGTtgcaaaaaattcaagaattcTGTTACGATAACATGAGC
TTCTTGAAACTCTTTCAAAAGATTGTCATGCTCCTCTACAAAGTTGACGT
GATTGGTGAGGATACAATCATCAAGTGGTTCAAGTCGGGACACAGTTCTA
AAGGAAAGAGTGTTTTCTTAGCACAAATGGAGAAAATGGTGGAGTGGCTT
CAAAGTGCTGAGGAGGAGAGctctgaagaagaagatgatgatgaagaaga
agaagattgaaaaataatgggatcttttttataatgatattttttttgct
gCCACCcatataaaattgatttttttttgtataaggGGTACACTTACTTA
CTATAACTTTGTTtcatacttataaaaaaaattggtctatatctaaactt
attttttatttatacattttaaataaagttttttttcgttCAATCTTTTT
GTCATGGTGGTTAGGAAATCTATATTAAAATGGAAAGGgtctttaaatat
aattttttatacTGTATCCATAAAATGCTCTTTGATCTTCT
Run BLAST on NCBI

transcript from alignment at scaffold_200:141402..156351-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00051329 ID=TCONS_00051329|Name=TCONS_00051329|organism=Clytia hemisphaerica|type=transcript|length=14950bp|location=Sequence derived from alignment at scaffold_200:141402..156351- (Clytia hemisphaerica)
TTAGCAGCTCCCGCACCATTTTTCTTCGAATTTTGTAAATACTAGAATTA
TTAATAGCAAGAAAGATATAGCAAACTCGATATGTATTTTTTTTTAATTG
TTAATGTATATTTTTGGATAATTAATTGAGTAATCCTATTATTGTATTAA
ACCATTTATTTTTTATAAATTTGAAGAGGAATTTTAGCTTTGTTTTAAGT
GCCTATTCACATAAAAAAGTTATATTTATAAATCTACTCGACCCAGGCCA
GCTCTCTGGTCTTTCCCACCATCCGCAGCCACAATCATTTCAGCTCGACA
TTTTTGGCACTTGTCGGTCACTAGCATATTCACTTTCGAGAAAATAATTT
CGGTGGGCTATTTTCCACTTTTAATACAGAGTACATTTATTTCTTGTTTG
TGCAAGGACCTTAACCAAAGAAGACCTTAAGGTAACTTTTTATTTACAGC
CCTATGTCTTGTCTAAGGAAAGTTTCCTAGTATTTTTTTAAGCTACCAGT
TACATTCAAGACTAGCAAAGAGTTTCAATATTTAGGAGAATATATGAGTT
CCCATAGAATGCTGTTTTAAATATTGCCGGTAAAATCTATTTTCTGTCCC
AGACGAAGAAAAGCCTTCTTTGGTCAGTGTTTAAAATATTGGGGTGGGTT
AGTCTAAACCGGTTGTCGAACTAGGACCCTGCCGACGCACCGGACTTAAC
GAACACCGGACACGCGAAAGTCCGGTGTAAAATGAGAATTTATTTTACCA
CCGGACAATTTCTACACCGGACTTAAGGAAGTCGGATGTCCGGTGTTGGA
GAAGGATATTTTTCCCCACCGGACAATCAAAACACCGGACATGACCAGTC
CGGTGGCGTCCGGTGTTTCTTAATTTTTTGTTTCATAAATGTCCGGCGTC
CAAAATTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ATCGAATACTCACAAATTTCTCAAAATACAAAGTTCGATTAAGTTCGATT
ACTGAAATCAAACTTAATCGAACTTTTTTTAAAGAGACCTCAACAGTTCG
ATTACCTTATTGGTATATATTTTTGCGTGTTACAAATTTTCGCGAATCGC
GAAATTTTTTCGAAAAAACGTGTTTCGCGCGTATTAAATTTCGCGATTGC
CGACTTCTGGAAAATTTTCGCGTGTATTAAATTTCGCGATTCACTAAACT
AGGTATTTTCAGAAAGTGGGAATATAAAGCAAGAAAAAGACTGGTTTTGC
TTGAAACACAACGTTTTTGATGTAAAAATACTAACAAAATATTAAGAAAA
AGATTTTCGCGTGTATTTAATTTCGCGATTTTGTAATTTTGAAAAATTTA
AACAGTATTAAATTTCGCGAAAATTGACCAAAAAACTCGCGAAATTAAGT
ACCCGCGAAAATTTGTAACACGCGAAAATATATACCAATAAGGTAGTTCG
ATTACATTTAATCGAACTTAATCAAACTTTGTCAAGTTTAATCGAATTAA
AATTTGAGAAAACTCGAGCAACTGAAGGCCGCTCCACTTGCGCGTAATTC
AATCGCACTTTTTGCCGGCCTTTGAGGACACTTTGAGGAACTTTGAAGCA
CCCCCGCTGATGCAGGCGTGTACCCTCGCGTCCACCTGACCAGTGGACAC
CGATCAAACTCCCCGGAACCTCCAGGGGCCGTCCACGGTGGTACCCAAAT
GAGGTCATTTTTCCCAATTTACGCCAATTTTCAAGCCTTTCCCAGCCTTT
TAAAGGCTTCGGAGCACTGATGGAGGGTGCTTACTTTGAGGGAGAGCAAG
GCAGAGGGTATCCGAAGGGGTCCAAAGGACTATGGGGGCTGTGGAGGGCT
GTAGAGGCCTCAATTGGTCTCACCGGCGATTTTTCCTGGTGAGAAAGGGG
TGTAGCAGCCTCAATTGAGGAAGTCATTTTTGGCAATTTTTGCCGGCTTT
TGACAGCACTTAGAGGAATTTTGAAGAACCCCCAACGGTGCAGACCTGTA
CTCTAACATCCCCCCTGACCAGTGAGCACCAATCGGACCCCCCGGCACAC
CGGGNACCTGTACTCTAACATCCCCCCTGACCAGTGAGCACCAATCGGAC
CCCCCGGCACACCGGGACCCCCAGGGGCCGTCCGCGGTGGTACCCAAAGG
AGGTCATTTTTTCTAATTTTGACCAATTTTCAAGCCTTTCCGCCTTTCCA
AGCATTTTAAAGGCTTCGGATGACTGATGGAGGGTGCTGGCTTTGAGGGA
AAGCAAGGTAGAGGTTATCCAAAGCGGTCCAAAGGGGTCCGAAGGGCTGT
GGTAGGCTGTGGGGGGCTGTAGAGGCCTCGATTGGTCCCACCGGGGCTGG
TACCCAAAGGAGGTCATTTTTCGCAATTTTTGCTGGCTTTTGACGACACT
TAGAGGAACTTTGAAGGACCTCAAACGGTGCAGACGTGTACCCTCACATC
CCCCTGACCAGTGGGCACCAATCGGATCCCCGGGACCTCGGCCGGGACCC
CCAGGGGCCTCCCAAAGGAGGTCATTTTTAATTGTCGAACTTTTTCGAAC
GGAGTTTTTTGTCGAATTTGTTGAACCTTCCTTGTTGTCGAACTTTATCG
AACTGAGTTTTTTTGTCGTATTTGTCGAACATTTCTCGTTGTCGAACTTT
GTCAAACTTAATATGTTTTGTCGAACTTAATCGAATACTCACAATTTTAG
CGACTTTTGAAAATAAGTTCAATTAAAGAATTTAATCGAACTTTTGTCGT
TTGATTAAGTTCGACAAAGTTCGATTAGTTCGGTAATCGAACTGTTCGAT
TAATTACGTCTGGATAGGATCGATAATAGGAACGGATCGATAAAGGGTTG
ATAAAAGATCGATAAATTACTTATCGACTCCGATAAGGGATCGATAGAAG
ATTGAGCTCTAAAAAATCTTGAGTATCGATCCTTCCATGATCCCTTATCG
ATCTTTTTTTCAATCGATCCTCTAGTGATTTATCTATATTACTAAACATA
GAATTCGTATTGAGCCGTGGTGGAGCCATTATGGATTTTTGAGATGGGGG
TTCAAGAGTTACGTGACCGATTTTTGGTTGGTTGGATGGATGGGTGGTTG
AAAACGAAAGCAAAAGTGGTCAAGGGAAGAGTATGAAAATTAGCGTTTTT
TTAAAGAAGTCGTTGCAGTGCAAATCTTTTTCAAATTTAAAAACCCACTT
TCCTTGGAAATAATTGACGTTTTTGGGTTTTTTGGGACCCTTGGGGCACA
AGCTACCCGTTGACCGCAAAAATTTCAAAATTTGCGAATTGACGGTTGAC
AACATTAGGACATGTTCATTAAAAAAGGCAAGTCCTGTGACATGTCAAAA
AGTTGGAAGAATCGTTTTTTGTTAATAAATCAATAAATATTGTCTCAAAG
TCTATGAAATTTGCTGGATAATTAGGTAACATGGTAACAAAGCCCCTGAA
AGGACAAAACTTCACTTTTTGTTGTTAGTTTACCAAGAATGGATAATAAT
GTAACTTTTTAATTCATTGGGGTAAAGGGACCCAATGACGTCACAGATTT
GAGAAAAATTTCAAAATGCGATATCTCGAGTTTGAAAAAGAGTTGGGAGG
TTGGTGACCCCTCATTGGATCGAGAATTTCATGGAGAATAAGATGGGAGG
ATTTATNAGGGGTAAAGGGACCCAGTGACGTCACAGATTTGGGAAAAACT
TCAAAATGCGATATCTCGAGTTTGAAAAAGAGTTGGGAGGTTGGTGACCC
CTCATTGGATCGAGAATTTCATGGAGAATAAGATGGGAGGATTTATATGG
CTTGAGTGTGACTTTGAAATTTGGCTGAATTTTTAGGCCTTTTCACTTAA
TGACGTCATCAAAACCGGTAAAATGCGATATCTCGAGATCGGAAAGGAGT
TAAGAGATGGTTGACCCCTCATTGGATCGGGAATTTAATAGAGAATAAGT
TGGGAAAGGTAAGAGTGGGTATAAAGAGACTTTCGAAAATAAATATACTC
AAATTGAGGCATTTTGGGTCCGATGACGTCATCAAAACCTGAAAAATACA
ATAACTGGTGTTTGAGAAGGATTTCAGTAATGATTGACACCTCATCGGAT
CGGAAATCATCGTTAAAATCTTTTGGGTAAATGACAAATTGATTTTAGTG
AAATAAAATATTTATTACCCTTTCGATGATGTCATTAAGAGCCCAAATGA
CGTCACAAAACATTAAATTTGCAATATTTTTAGTTTTCAACATTTAAAGT
GGTAATTTTTCGTTCTTTGGGCTTATAAATCAGATCTATTACGGAATTAT
GTATTATGAATTGGATCGATGTAAGATAATAATCGATAAATGATCCTGAC
CAAAAAAATTTGAGTATCGTCCCCACTCGATCTCTTATCGGAATCGATAA
GTAATTTATTGATCTTATATCGATTCTTCATCGATCCCTTCCGATTATCG
ATCCTATCGAGCCCGACCGCCTGGTCTAAAGCAATAAAAAGGTATTTCAA
TGGGTTGGCAGACGATATCATCCACCAGGATGCAAGTGAAATTTTTCAAT
CTACAGACCTAGATGGGGGTTCGGTTATTATCAGTTAGGGTTACAGTTGG
AGCTCGAGAGTCACAATATAAGGCCGAAGGCCTTCTTAGGGGCATCCTAT
TTGTGTAATTGATTAATGTGCAATTGGAACAAGTCCATTCTTAAGAGTTC
ATCGTTTGTACAAGCATTAAATACATGAGAGTTCAATGATAAGCAATTTA
CTTGAAATGTCTAGAAGAATGTGAATTTGTACATAGTGAGGAAGCTGTAA
CTCCTCTTGCCCTTCTCAATTTTACAGCAACAAAAGAAGCAGGGCTGCAA
ATAAATATTTTTGGTCACTCTGACATTATGTCGGACTGAAATTAAACCCA
GTCAGTCAGACTCAAAATCCTCTCGGTCTTTCAGTCGTTATAATTTTTCA
ACTAGCAGGATATATTTTCTAACCTCAATAAGAGGATAGCCTTTAAAAGT
TAGTTAGACAGCTAATATGTAGATAGGAGTGACCTTGGAACATACAGTAA
TAGAGAAAGTGGTAAGTTGATAAAAGTGAAATTAGAAACACTCTTAAAAA
CTACAAAAAAAGCGATTTGATAAAAGTGATCTTTGAAACACTCGTAAAAG
TTACGAAAAAAGCAATTTGATAAAAGTGATCTTAGAAACACTCCTAAAAG
TAATGAAGAAAGCGATTGGATAAAAGTGATCTTAGAAACACTCCTAAAAG
TAATGAAGAAAGCGATTGGATAAAAGTGATCTTTGAAACACTTTTAAAAG
TTTCAAAGAAAGCGATTTGATAAAATGATCTTTGAAAGACTCCTAAAAGT
AATGAAGAAAGTGATTGGATAAAAGTGAATTTAGAAACACAAGGAGGTTA
ATCTAAAGAATCCTGCATTATTAAAAATAAACAAAAAAAACAACAAATTT
CATATAGAACGACATATTTTGCCGTGCACAACCAGACCGAAAGTGACTGT
ACCACCCCTATCGATTTATTCCTCTTCGTTTATCATGGAAATTAACTGCA
TGTGGTTTAAAAAAACGACAAATTACGCATGCCATGTGTGTCACAATGCA
GGTTTCTTTAGAAGAATAGACTGACACTATTAAAAGTTACGAAGAAAGCG
ATTCGATAAAAAAAGTGAACGTAGAAGCACTCTTATTAAATATGTTCACT
AATATTGATGAGTGTATGCTCAGTAGAGTGAGCCTTATAAAAACCAAATA
GAGAGTAGATTTTAATTATGTTGATTGAAGAAAGTCAAACAGACATGAAT
ACACATGAATACACTCTTTCAAAAAAACAAGTTTCAGCTTCGAGGAAACT
GAATAATGGAAAAAGACAAAACTGGGGGAGATGATCTGATATGGAAAAGC
ATAATGTTGCCAGATACAGCTCCATCGTTAATATTAGATGGTTTAGAAAG
AATATATCAATAAGAGTATTAGGATCCATAATGGACATTATCTCTGTATC
ATCCTCTCATTTTAGAATTGAAGTCTCTAAAGGAGAAGCTGCTTTTTCTC
AGGAGTAATTTAGCTAATCAAAGGTTTTAGAAAATCGTGGTTCATGCCAA
CCATGTTTTGCAATAATAATGTAGTACTGCATTGGTACTGTCCCGTAGCA
TGATTTCTAATGAAAAATAGCAAAGTTGGTCTAAGTCTGTGCTAGGTTTG
TGAGATATAATAAGGCTTTTCTCTTTTGGAATAGATTCTGTTGATGTTGT
GTAAATATTATGCAAATGGCACATGTGTGACATGATTAATTTTAGATTTT
TGTAAAGTGTTTAGGTTATATTTTCAATTACAAAAAAAACTTGTGGCATT
GAAGGCCCTAGTCATTATTGCAGCTTCAATTGAACTACCCTTCTTCCTCA
GGGCCATTTTTGCCAGGAATCCCATTTTAGAGGTTTGTATTGTGTATAAT
GTTTTGTCTAGCTCTTTCTACCTTTGTTAATATTTTTGACTAACTCTAAA
TCTTTGGTGTTCTCTTTTCTATTTAGAAGCTGTATGAGTCAGAAAACCCA
AAAACCAACATTAACAGGACAGCGGATCAAGACCCGCAAAAGGGGTAGGT
AACTAAAATTACATTTTATTTGGTTACATGTCTTTTGGCTTTTTTCACTT
CAAAATACTTTACACTGAAAATAAATTAAACTTAATGCATATACGTTATT
TGTACAAAGGTCAAACTTAAGGACTGAATATCTGTTTTAATTGTTGTCTT
AATAATGGTTCATATATTTTTAGATGAAAAGGAGAAGTACGATCCAAGTA
GTTTCAGAGATCAGATNTATCAATAAGAGTATTAGGATCCATAATGGACA
TTATCTCTGTATCATCCTCTCATTTTAGAATTGAAGTCTCCAAAGGAGAA
GCTGCTTTTTCTCAGGAGTAATTTAGCTAATCAAAGGTTTTAGAAAATCG
TGGTTCATGCCAACCATGTTTTGCAATAATAATGTAGTACTGCATTGGTA
CTGTCCCGTAGCATGATTTCTAATGAAAAATAGCAAAGTTGGTCTAAGTC
TGTGCTAGGTTTGTGAGATATAATAAGGCTTTTCTCTTTTGGAATAGATT
CTGTTGATGTTGTGTAAATATTATCCAAATGGCACATGTGTGACATGATT
AATTTTAGATTTTTGTAAAGTGTTTAGGTTATATTTTCAATTACAAAAAA
AACTTGTGGCATTGAAGGCCCTAGTCATTATTGCAGCTTCAATTGAACTA
CCCTTCTTCCTCAGGGTCATTTTTGCCAAGAATCCCATTTTAGAGGTTTG
TATTGTGTATAATGTTTGGTCTAGCTCTTTCTACCTTGTTAATATTTTTG
ACTAACTCTGAATCTTTGGTGTTCTCTTTTCTATTTAGAAGCTGTATGAG
TCAGAAAACCCAAAAACCAACATTAACAGGACAGCGGATCAAGACCCGCA
AAAGGGGTAGGTAACTAAAATTACATTTTATTTGGTTACATGTCTTTTGG
CTTTTTTCACTTCAAATTACTTTACACTGAAAATAAATTAAACTTAATGC
ATATACGTTATTTGTACAAAGGTCAAACTTAAGGACTGAATATCTGTTTT
AATTGTTGTCTTAATAATGGTTCATATATTTTTAGATGAAAAGGAGAAGT
ACGATCCAAGTAGTTTCAGAGATCAGATTGTAGCCGGCCTGAATGAAGTT
AATGCAGATCTTGAACTAGTAAGTTGACTTTTTCCAAACTCGTTATCCAA
CTTAATACTGAACACATTGTAGTGCGTATATTTTTGCCTGTTTTAATCTA
GCAAAGATAGATGGGATCAGGGGGGTCGATAACCCACCTAACCCACCCAT
CCCACCTAGGCAAAAGTTTTTTTTAATGCAGAATCCTTTTTTAATACTAA
AAAAATATTAATTAAAACACTATCGAAACTGTACAAGAGTTATATTCTTT
GTATACACATGGAGGTAATAAAGATATAGATGGAGAGAAAACGTCTCGGT
AATGATCTAAATGGTCGTTGAAATCTTTTATAAATCTATTCAAAGCGGCT
TTTCTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTCTTTGATGTACCATCATTGGAAGCAAAAAACATCAATTTATAA
CTTTATAAGAACAGAAAGAGACTGTTTGGTTGATTTTGAAAAACTTAATT
TTGCCAAACATCCTTGTTAATATGCGATTCGAAATAGTTTCGACTGATGT
AAGACTAAAATAGTATATTAATTTCATAAGGACACATTTTTGGGCTGGCA
TTTTGTTAACATTGAGAGTTGCATCACATTATCATTGAAAGTTTCTTATC
TTAAAATCTTCACGTCTAAGTGGGCAGCGGTTTTCATACTCTGACAAAAT
GATCGATACAAGGTTCCTAATCGTAGCACGTAATTCTTTTTTAAATCTAT
CAATGGCTTTATGGGCAGCTTCCCCTAGAAGTTTGGAGTATTGTGCTTAT
TGTGAAGTTTTTTTCAATTTTTCATGACAAGGCTATTATATTTCAATATA
CTTGTTAAAAATGTAATGCCTTTTCATTCATCTTAAATATTCCCACGAGT
ATACCCAAAATTAATCATCTTATTCCCAAAGGAACCAAACAGCTGTTTGC
TTCCGATGATAAATCAGAATAGAACAAAAGGCATTGACTCTCCATCTATA
TTTTTATTACCTCCATGGTATACATCAGCCAGGAATGTTGGTAGTTTTCG
GCTGGCTTTGCGCTTTTCTTTATGTAACTTTGAAGTTTTCGCTTTATTTT
AAGCTACTCTTATTACCCTGTAGCTTACAAAAAATTTCCATCTAACACAC
ACACAAACAGAAGTCTATCGTGATACTTTAAGCGAAACTAATAAAGTTCT
CTTGAGCCACTAATTACTGCTTCTTTTTAGGCTTCAAAGTTCCTGATCCA
ATCTGGAAGTAAACTTGATTTCCGACGTTACGCTGAGGCACTACTAGACA
TTCTTATCACTGGTGGCATCCTTGCCCCTGGTGGTACGATAGTGACCGAC
AATGCTGCCATCTCAAGCATCTGTGTGTTCAACACAGAACAAGATGTGGA
CAACATGCGTAATGTCATCCAGCTTTTTGAGCGTATGATCCGCCAGTACA
AATACCTTGAAAAATCTCTTGATGATGAGATGAAAAAGGTTAGGGAATTT
AGTTTTTACTTCAAATCATATTTTGTTTGTATTTTTCCTTTGATATCGTT
TTAACAGTTTATCGAGGTATCCAACAAGTTGAACTGCTTCAGTCAGCTTT
TAAACCCCTTTTCCAAATTCCCAGTTTTGATTTTAGTTTTATAGCCCTGT
ATGTAGATGGCATGGCATTCCAAAGTTTTTACATTCCAGCAAAATAGATG
AAGACTGCCTGTAGTTTGTTGTAATTTATGTCCAATTCACCCAACACAGT
TAGAAAACTATTATTGGAATCTTTACACTTCCAGCTATCGACGTTTCTAA
AAGTTGTTTATTCACATTGGTTGCAACATGATTTGATTGATGTTATTTTT
TCCTTTCTTTAGATATTGATGTTTCTGAAAGGTTTCACCGATGTGCAGCG
TGATCGATTAACCCTTGCTACCTACCTACTCATCTCATCAAGTCTTATCC
AACCTACTTGCCTCATTCAAATTTTGAATGATCATTTGGTCAATGAAGGT
ATTGCATTGGAGTTTGCAAGATGCTTTTTCAGCGCTTGGCTTGCAGAAAA
AGATGCACCTGGATTGATCAACATTCTTAAGAAAGCTGAGATGGATGGAA
AACTCATGGTAATTGATTTGGTGAATTTTTGGAAGTTTTTATCTGCTAAT
AATCATCCACCCTTTAAAAAATCGATACAAAACCGGTATTTGAACCATCG
ACACTTTGAACAAATTCATGTTGACCAGAAAGTTTCCCAGCATTGTGTAA
TTTAATCGAATGAATACAGTCACTCTGAATTAGTTGTCTTATAACCAGCC
ACTTGAACCTTTAGAAAACTGGTGAATCCAACCAGAGTCTAATTTGCAAC
CAAACCATCTTTGTATGTGTTTTCTCACCTTCATAGATGCTGTTTCCAGT
GCACAAACGATCCATTGAAACCTTTGAAAATTATTTCAATGAAGCTGACC
TGAAGCCAATTGTCGATTTCCAGGTATGTTAACCTTTACTTAGAAAATGT
TTTAACAGTTTTATAATGGTCTTTTCGAATATATTGAAAACAATGGGCTA
TTCCAGAAAAAGTCTATGCCCATGTTGAGGAGGTATGACGTCCAGGGTGG
TCAATAAAATGAGGTCGGAAAGGTAGTCAAAAAATGAGATTCAAGGTGTC
CTTGAAAAATTTATTTACAAATCTCAACATAGCAGATAGAGGATGCAAAT
TTTTCTGGAATAGCCCAATGTCGTAAAAAAGTTTAACAGAATTAATTTAA
ACACGAATTCATGAAATCGTTTACCTTGTCGGAGGTTTGGATTTTGATTA
TTTGTATGTTTGAGTTTTGACACTTAATTTCTCGTTGTTTTCTTTCAGCG
CAATCAAAATGCACGTATAGTAACAAAAGAGATGAAATCACGAATCAAAA
GATTACTTGAGGATGAATCTACTGCTGAAGAGGTATACTTTCTCATCCAA
AACGCTGATTGAAAAAATATTTTCTCTTTTTGAGTATTTGAAATCTTCCA
AGCCAGTCACCTCCCTATATATATATAGCTTTAACTAACATTGGAATATT
ATAGAGCTTTTCATAAATTACGTCACGAACATCACTTGCCTCGTTTTTAA
ATTATTGCCATGTTGATTAACTCCCAACGGATTTTATTATAACTCCTTTC
TATTCATAAAAAAATCATTTTAATGTCTCAAGCGACATAATCACCATGGT
AATTGTTTGAATACGAGGCAAGTGAGTTCGTGACGTAATTTATGAAAAGA
TCTATTAATGCCAATGAACAGTTTACCATATATTGATAACGTTTTCCTTA
CATTTTAGATAACCAGTTACATGCAAGAAACTTGCGAGAAAAACAAAATT
GAAAACTTGGACATCATCCCACTGGTAGATAAAATTCATCTTTTATTGTT
TTCTTCTTTCTTTATGCACATTAATTTGATCTTAGGGGGTTGATGTTCAG
GGCTTCTCCAGTATGCTTTCACCAAGAAAATGTTAGCCTGGCAACTNCCA
TCTTTGTATGTGTTTTCTCACCTTCATAGATGCTGTTTCCAGTGCACAAA
CGATCCATTGAAACCTTTGAAAATTATTTCAATGAAGCTGACCTGAAGCC
AATTGTCGATTTCCAGGTATGTTAACCTTTACTTAGAAAATGTTTTAACA
GTTTTATAATGGTCTTTTCGAATATATTGAAAACANAGCGTCATAATCTA
TCATCACAGTTGACGCGCTCTAATTCGACGTTCTACCATTCCATACGCTA
CAATTATTTGATAATATTGAAAGTCACCGTAAACGTAAACGGCGCTCTTT
TATACGATANGAAAAAGTCTATGCCCATGTTGAGGAGGTATGACGTCCAG
GGTGGTCAATAACATGAGGTCGGAAAGGTAGTCAAAAAATGAGATTCAAG
GTGTCCTTGAAAAATTTATTTACAAATCTCAACATAGCAGATAGAGGATG
CAAATTTTTCTGGAATAGCCCAATGTCGTAAAAAAGTTTAACAGAATTAA
TTTAAACACGAATTCATGAAATCGTTTACCTTGTCGGAGGTTTGGATTTT
GATTATTTGTATGTTTGAGTTTTGACACTTAATTTCTCGTTGTTTTCTTT
CAGCGCAATCAAAATGCACGTATAGTAACAAAAGAGATGAAATCACGAAT
CAAAAGATTACTTGAGGATGAATCTACTGCTGAAGAGGTATACTTTCTCA
TCCAAAACGCTGATTGAAAAAATATTTTCTCTTTTTGAGTATTTGAAATC
TTCCAAGCCAGTCACCTCCCTATATATATATAGCTTTAACTAACATTGGA
ATATTATAGAGCTTTTCATAAATTACGTCACGAACATCACTTGCCTCGTT
TTTAAATTATTGCCATGTTGATTAACTCCCAACGGATTTTATTATAACTC
CTTTCTATTCATAAAAAAATCATTTTAATGTCTCAAGCGACATAATCACC
ATGGTAATTGTTTGAATACGAGGCAAGTGAGTTCGTGACGTAATTTATGA
AAAGATCTATTAATGCCAATGAACAGTTTACCATATATTGATAACGTTTT
CCTTACATTTTAGATAACCAGTTACATGCAAGAAACTTGCGAGAAAAACA
AAATTGAAAACTTGGACATCATCCCACTGGTAGATAAAATTCATCTTTTA
TTGTTTTCTTCTTTCTTTATGCACATTAATTTGATCTTAGGGGGTTGATG
TTCAGGGCTTCTCCAGTATGCTTTCACCAAGAAAATGTTAGCCTGGCAAC
TGCTATCTTTTGGCGCCTGCGTCATGATCTATCATCACAGTTGACGCACT
CTAATTCGACGTTCTACCATTCCATACGCTACAATTATTTGATAATATTG
AAAGTCACCGTAAACGTAAACGGCGCTCTTTTATACGATAATTTTTGATG
AAAATCCTATTTCCCTTAGACGTCGAATTAGAAAGCGTCAACTGTACATC
GAAAATAACCCCCTTTCATTTGACCAATTCTTTCTTTTGCAGTTGTGGTC
GAGTTTGATGAAAGGTGTCGAATGGAACAAGAAGGAGGACTTATTGGCTG
AACAAATTCTTCGTCATTTGAAAACATACGCTTCAGTTCTCCAAAGGTTC
ACTACCACTCCTGCTACCGAACTATTGTTGTTGCAAAAAATTCAAGAATT
CTGTTACGATAACATGAGCTTCTTGAAACTCTTTCAAAAGATTGTCATGC
TCCTCTACAAAGGTATGTATGGTAAAATCTATATTGATTTCGTTTTTTTC
TTTCGAAAGAATCATTCAGAGATGTTGANTAAATTTGTATCAATTTCGTT
TTTTTTTCCCGAAAGAATCATTCAGAGATTTGAGTCAGAAAATATACTCA
GAAAATTCTGGCTCGCGTTGTATTTGAATTTCCATCAAAACTGTCAAAAA
TCCTAATTTAGTAATAATCTATATATTAATACGCTTAAACGTGTGTGTTT
ACAACGTTTTGTAAAATGTTTTCGAAAATCTAACAAAGCTCTACAAAGCC
TCCTCTTCATGGCGTTGAACCATCATCTTTTTGCACCTTAAAGGGATAAT
CAGATGGTTTGAGATATTTTGCCTACAGATAGCTTCTAGGATTTTAGGAA
AAACCTCTAAATTTTTTGGTGTACTTATTTTCCTAACTCAAGTTATGCCA
CTTTGAAATTTTGAACCTTTGCTTGAAAACAATAGAAAAAAGTGTGAAAA
GTCCCTGAAAAGTCCCATTTTTCGAGATTTCAAATTGGCATAACTTGAGT
TAGGAGAATGAGTACACCGAAAAGTTAAGAGGTTTTTCCTTAAATCCTAG
GAGCTATCTGCAGGCAAAATATCTCAAACCATCTGATCATCCCTTTAAGT
AGATTTCCTACCACTAGACTAACTTTGAGACCCCAAGATACTATTTTCTA
TTCACCAAGTTTGGAGCTTGATGGGTTAAAATCAACCTTCTTCCCAATTT
TTTTCGTCATTTTAAAGAATTCTTATTCAGATGCTCTTTAAAACTTTCTG
TTTACAATAGCGGTTCCCTATCACTTTCAAAACTTTTCAAAGTCTTTCAA
AGTCACCCTCGAATGTCCAACCACGATAGCTAGCCACGATGGCTAAAATA
TACTTTTGCTAAGCCATTTATTTAATTGTGGTTAAAAATTGCAATGCAAT
GTTATCTTCTTCCTCCTTTATTTCCTAAAATCAAAATCAAATCATCGATC
GGCGGCTACCTTTCTTCCGTTAGAATTTTTTAGATGTGTAGTGACTCACT
GGATTGGGACACGCAGCGTGCGACGCTGCGCATACGGCTAGTAGACCTTA
AATCGGAGTTTTTTATTCTTCTAAAAAAGTAATGCATTGTGTGATTATTA
CAATAGAATTCCCTCGATGAATTCCTAAGAGATTTCTATTGTAATACACT
CGAAACAATCCCACAATGCATCGCTTTTTTTAGAAAAATCAAAAACTCTG
ATAAGGTCTATGAACTGGCCATATTCTGATGTGCATTCTCTTGCTTTCTT
AGTTGACGTGATTGGTGAGGATACAATCATCAAGTGGTTCAAGTCGGGAC
ACAGTTCTAAAGGAAAGAGTGTTTTCTTAGCACAAATGGAGAAAATGGTG
GAGTGGCTTCAAAGTGCTGAGGAGGAGAGCTCTGAAGAAGAAGATGATGA
TGAAGAAGAAGAAGATTGAAAAATAATGGGATCTTTTTTATAATGATATT
TTTTTTGCTGCCACCCATATAAAATTGATTTTTTTTTGTATAAGGGGTAC
ACTTACTTACTATAACTTTGTTTCATACTTATAAAAAAAATTGGTCTATA
TCTAAACTTATTTTTTATTTATACATTTTAAATAAAGTTTTTTTTCGTTC
AATCTTTTTGTCATGGTGGTTAGGAAATCTATATTAAAATGGAAAGGGTC
TTTAAATATAATTTTTTATACTGTATCCATAAAATGCTCTTTGATCTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032520XLOC_032520Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00051329-exon-scaffold_200-1575043694:155921..156351TCONS_00051329-exon-scaffold_200-1575043694:155921..156351Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:149558..149625TCONS_00051329-exon-scaffold_200-1575043694:149558..149625Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:148434..148516TCONS_00051329-exon-scaffold_200-1575043694:148434..148516Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:146864..147121TCONS_00051329-exon-scaffold_200-1575043694:146864..147121Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:146244..146489TCONS_00051329-exon-scaffold_200-1575043694:146244..146489Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:144736..144822TCONS_00051329-exon-scaffold_200-1575043694:144736..144822Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:144165..144248TCONS_00051329-exon-scaffold_200-1575043694:144165..144248Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:143723..143788TCONS_00051329-exon-scaffold_200-1575043694:143723..143788Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:143140..143359TCONS_00051329-exon-scaffold_200-1575043694:143140..143359Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1575043694:141402..141849TCONS_00051329-exon-scaffold_200-1575043694:141402..141849Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:155921..156351TCONS_00051329-exon-scaffold_200-1510915933:155921..156351Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:149558..149625TCONS_00051329-exon-scaffold_200-1510915933:149558..149625Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:148434..148516TCONS_00051329-exon-scaffold_200-1510915933:148434..148516Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:146864..147121TCONS_00051329-exon-scaffold_200-1510915933:146864..147121Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:146244..146489TCONS_00051329-exon-scaffold_200-1510915933:146244..146489Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:144736..144822TCONS_00051329-exon-scaffold_200-1510915933:144736..144822Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:144165..144248TCONS_00051329-exon-scaffold_200-1510915933:144165..144248Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:143723..143788TCONS_00051329-exon-scaffold_200-1510915933:143723..143788Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:143140..143359TCONS_00051329-exon-scaffold_200-1510915933:143140..143359Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1510915933:141402..141849TCONS_00051329-exon-scaffold_200-1510915933:141402..141849Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:155921..156351TCONS_00051329-exon-scaffold_200-1491911889:155921..156351Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:149558..149625TCONS_00051329-exon-scaffold_200-1491911889:149558..149625Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:148434..148516TCONS_00051329-exon-scaffold_200-1491911889:148434..148516Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:146864..147121TCONS_00051329-exon-scaffold_200-1491911889:146864..147121Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:146244..146489TCONS_00051329-exon-scaffold_200-1491911889:146244..146489Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:144736..144822TCONS_00051329-exon-scaffold_200-1491911889:144736..144822Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:144165..144248TCONS_00051329-exon-scaffold_200-1491911889:144165..144248Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:143723..143788TCONS_00051329-exon-scaffold_200-1491911889:143723..143788Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:143140..143359TCONS_00051329-exon-scaffold_200-1491911889:143140..143359Clytia hemisphaericaexon
TCONS_00051329-exon-scaffold_200-1491911889:141402..141849TCONS_00051329-exon-scaffold_200-1491911889:141402..141849Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_200supercontigscaffold_200:141402..156351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.163987	0.0736169	0.0984808	0.0667178	0	0	0	0	0	0	0	0	0	0.0678994	0.0582359	0.153211	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00051329 vs. Swiss-Prot (Human)
Match: BZW2 (Basic leucine zipper and W2 domain-containing protein 2 OS=Homo sapiens GN=BZW2 PE=1 SV=1)

HSP 1 Score: 427.943 bits (1099), Expect = 3.853e-143
Identity = 199/406 (49.01%), Postives = 287/406 (70.69%), Query Frame = 1 
Query:  448 KTQKPTLTGQRIKTRKRDEKEKYDPSSFRDQIVAGLNEVNADLELASKFLIQSGSKLDFRRYAEALLDILITGGILAPGGTIVTDN--AAISSICVFNTEQDVDNMRNVIQLFERMIRQYKYLEKSLDDEMKKILMFLKGFTDVQRDRLTLATYLLISSSLIQPTCLIQILNDHLVNEGIALEFARCFFSAWLAEKDAPGLINILKKAEMDGKLMMLFPVHKRSIETFENYFNEADLKPIVDFQRNQNARIVTKEMKSRIKRLLEDESTAEEITSYMQETCEKNKIENLDIIPLLWSSLMKGVEWNKKEDLLAEQILRHLKTYASVLQRFTTTPATELLLLQKIQEFCYDNMSFLKLFQKIVMLLYKVDVIGEDTIIKWFKSGHSSKGKSVFLAQMEKMVEWLQSA 1659
            K QKP LTGQR KTRKRDEKEK++P+ FRD +V GLNE   DLE  +KFL  +GS+LD+RRYA+ L DIL+ G +LAPGGT + D     +++ CVF+  +D + +RN  Q+F ++IR+YKYLEK+ +DEMKK+L+FLK F++ ++ +L + + +L+ +  +  T L  +  D LV EGIA  FA   F AW+AEKDA  + + L+KA +D +L+ LFPV+++S++ F  YF +A LK + DF R Q +    KE++  ++  L  E   +E+  Y++E  ++N +    +I LLW+ +M  VEWNKKE+L+AEQ L+HLK YA +L  F++   +EL+LLQK+QE+CYDN+ F+K FQKIV+L YK DV+ E+ I+KW+K  H +KGKSVFL QM+K VEWLQ+A
Sbjct:    3 KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYRRYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRYKYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGIAASFAVKLFKAWMAEKDANSVTSSLRKANLDKRLLELFPVNRQSVDHFAKYFTDAGLKELSDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVKEEMKRNDLPETAVIGLLWTCIMNAVEWNKKEELVAEQALKHLKQYAPLLAVFSSQGQSELILLQKVQEYCYDNIHFMKAFQKIVVLFYKADVLSEEAILKWYKEAHVAKGKSVFLDQMKKFVEWLQNA 408
The following BLAST results are available for this feature:
BLAST of TCONS_00051329 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BZW23.853e-14349.01Basic leucine zipper and W2 domain-containing prot... [more]
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