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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00050979 ID=TCONS_00050979|Name=TCONS_00050979|organism=Clytia hemisphaerica|type=transcript|length=1212bp
ttcgattatatcctatatgggagtgttttatgtGAAACGTTTAACAATAA
TTGACATATATAATGTTTCgtttttgcctctaggtatataataaaacata
tattcaataggttttcgttggttattggatttattaaccNATTATCTCTG
AAACTACGGCCAATATAGATCCTATAAATAGACTCCACTTGCATTCTCCA
CCTCTGCCAAATAActcaaaaatagttttaccGCCCACCCACCCAACGCA
TGTCCTTTCTTGGTTTGctcctttttttttttcttttctctttcagGTGT
ACACGACGGGTCGATGTCATCAGCCAATCGCCACCCAGCGCCTCGGTCCT
AGAGTTTTTCCTGATGGCAGGTTTTTTAGCCCAAGGACTGACCATTTGGG
ATGTGCTGTGCAAATTTTAGCCGGTGGTTTCATTTCTGAATCTACCCTTT
TCAACAATCCTAATTATGTGGTCTCTTACACTGCTTGGCCACGGTCCACA
GTGCTCACATATACAATTTTTACACTGCCTGGCCACGGTCCACAGTGCTT
ACAGATACTATTACACTGCTTGACCACGGTTCACAGTGCTTACAGATATA
ATTACACTGCCTGGCCACGGTCCACAGTGCTTACATATACAATTTTTACA
CTGCCTGGCCACGGTCCACAGTGCTTACAAATACTATTACACTGCTTGAC
CACGGTTCACAGTGCTTACAGttacaatttatttattttttacactgCCT
GGCCACGGTCCACAGTGCTTACAGATACTATTACACTGCTTGACCACGGT
TCACAGTGCTTACAGttacaatttatttattttttacactgCCTGGCCAC
GGTCCACAGTGCTTACAGATACTATTACACTGCTTGACCACGGTTCACAG
TGCTTACAGATACAGATACAATTACACTGCCTGGCCACGGTCCACAGTGC
TTACATATACAATTTTTACACTGCCTGGCCACGGTCCACAGTGCTTACAT
ATACAATTTTTACACTGCCTGGCCACGGTCCACAGTGCTTACAAATACTA
TTTACACTGCTTGACCACGGTTCACAGTGCTTACAgttacaaattttttt
atttatttttttttttacactgcctggccacggtccacagtaattttctt
tttttttctctttgttagTCTCACCTCCTTTAGGGGTGTTGGCTTACCTT
CGGTAACCTTAG Run BLAST on NCBI transcript from alignment at scaffold_19:787247..788458 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00050979 ID=TCONS_00050979|Name=TCONS_00050979|organism=Clytia hemisphaerica|type=transcript|length=1212bp|location=Sequence derived from alignment at scaffold_19:787247..788458 (Clytia hemisphaerica)
CTAAGGTTACCGAAGGTAAGCCAACACCCCTAAAGGAGGTGAGActaaca
aagagaaaaaaaaagaaaattactgtggaccgtggccaggcagtgtaaaa
aaaaaaataaataaaaaaatttgtaacTGTAAGCACTGTGAACCGTGGTC
AAGCAGTGTAAATAGTATTTGTAAGCACTGTGGACCGTGGCCAGGCAGTG
TAAAAATTGTATATGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAAAAA
TTGTATATGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAATTGTATCTG
TATCTGTAAGCACTGTGAACCGTGGTCAAGCAGTGTAATAGTATCTGTAA
GCACTGTGGACCGTGGCCAGGcagtgtaaaaaataaataaattgtaaCTG
TAAGCACTGTGAACCGTGGTCAAGCAGTGTAATAGTATCTGTAAGCACTG
TGGACCGTGGCCAGGcagtgtaaaaaataaataaattgtaaCTGTAAGCA
CTGTGAACCGTGGTCAAGCAGTGTAATAGTATTTGTAAGCACTGTGGACC
GTGGCCAGGCAGTGTAAAAATTGTATATGTAAGCACTGTGGACCGTGGCC
AGGCAGTGTAATTATATCTGTAAGCACTGTGAACCGTGGTCAAGCAGTGT
AATAGTATCTGTAAGCACTGTGGACCGTGGCCAGGCAGTGTAAAAATTGT
ATATGTGAGCACTGTGGACCGTGGCCAAGCAGTGTAAGAGACCACATAAT
TAGGATTGTTGAAAAGGGTAGATTCAGAAATGAAACCACCGGCTAAAATT
TGCACAGCACATCCCAAATGGTCAGTCCTTGGGCTAAAAAACCTGCCATC
AGGAAAAACTCTAGGACCGAGGCGCTGGGTGGCGATTGGCTGATGACATC
GACCCGTCGTGTACACctgaaagagaaaagaaaaaaaaaaaggagCAAAC
CAAGAAAGGACATGCGTTGGGTGGGTGGGCggtaaaactatttttgagTT
ATTTGGCAGAGGTGGAGAATGCAAGTGGAGTCTATTTATAGGATCTATAT
TGGCCGTAGTTTCAGAGATAATNggttaataaatccaataaccaacgaaa
acctattgaatatatgttttattatatacctagaggcaaaaacGAAACAT
TATATATGTCAATTATTGTTAAACGTTTCacataaaacactcccatatag
gatataatcgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00050979-exon-scaffold_19-1491911889:787247..788458 | TCONS_00050979-exon-scaffold_19-1491911889:787247..788458 | Clytia hemisphaerica | exon |
| TCONS_00050979-exon-scaffold_19-1510915933:787247..788458 | TCONS_00050979-exon-scaffold_19-1510915933:787247..788458 | Clytia hemisphaerica | exon |
| TCONS_00050979-exon-scaffold_19-1575043694:787247..788458 | TCONS_00050979-exon-scaffold_19-1575043694:787247..788458 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:787247..788458 . |
Blast
The following BLAST results are available for this feature:
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