TCONS_00050455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050455
Unique NameTCONS_00050455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1663

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050455 ID=TCONS_00050455|Name=TCONS_00050455|organism=Clytia hemisphaerica|type=transcript|length=1663bp
NNAATTGGCTGCTCAGTGGATCACGTGACCGATTGGTCAAAGTCTTTGAT
ATTCGAACGATGAAAGAAATTTCTACATTCCGCGGACACAAGAAAGAAGC
TGCTTCTGTGAATTGGCATCCCATCTACGAGAAGATGTTTGCAAGTGGAG
GTTCGGATGGATCCATCATGTTTTGGTTGATGGGGTGTGAAAAAGAGCTG
GGTTGTATAGAAGGAGCTCATGACGGCATGATCTGGGATTTGAAATGGCA
TCCGCTGGGCCATATTTTGTGCACTGGCTCCAACGATCATACCACGAAAT
TTTGGACGCGGAATCGACCGGGAGACAAGATGCGAGACAAATACAATCTC
AATGTTTTGCCAACTGGCTTTGAAGACGATTATGAGTACGAGATACCGAA
CACATCACAATCAGAACTGGACACAACTCAGGAGACAGACACCTCCATCA
ACGAGAACAGCAAAGGTGAACAAGAACAGGAAGGGAAGCCAGATTTAAAT
TCACCAGTGGTCAAAGCATTGTTGGAACAATCCACTCTCGAAGTTTCAAA
ACCCAAGGAAACAGACGTTCCTGCACAAATTTATACATTCTCGCGAAGTA
ATCAACTGAAGAAGTTCCGTATCGATCCGGGAAAACAAAGGCGGGCTATC
GAAGAAGCGGAAAAATCACAATACGATCACGAGAGACAGATGGAAGAAAA
CATGGAGAAAACGAGAAATCGACGTGCGATGGAGCAACAACAACACGGAG
GAGGGTTTATACCAGGCGCTCCTTCGTTGCTTACCATGGATGTTCCTGTA
CCCGACTTTTTAGAAGGAGAGTATTGGGATGAAGGAGAAGAACCAAGTAT
GCATGAAGCTAAAAGAAGGTACAACCAACGTACAAGGCCCAATGACGACG
GGATGGACCCTAATGCTGGACACATCGGCCCTTCTGGATTCTATCACGGC
CCTGATGAACATTTCGGACCTGGTGGCCCTCATGGACCACCACCAATGCG
TCCGCCCTTTGATGGAGGTCGATTTCCAGGACCACGGCCTCGCTTTGATG
GACCGCCGCCGCCACACGATTTTCATGGTCCACCGCCAGGGCATTTCAAC
GAAGGAGAGGGCTACGATGAGAATTGGGAAGGTGGAGGATACGAACCTCA
TCCTCCTTTCCAAGGACAATTTCAAGGTGGACCTAGATTCCGACCACATG
GTCCTCCTGGTCCAGGTTTTGGTCCTGGTGGACCCCGTCCTCCTCGCATG
AGAGGACCTCGCCCGAACTTCCACGGTGGTCGCCCACCACGCCCACCTTA
TTGAAAAGTTAGATTTTCATATGATGGAGAAGGAGTTACGGTTCCAATGA
ATGAATGGATGTGCTTCGGTGTCTTGTTAGAGCTCTGATAGAAAATGCAG
TGAGCCAATATTGCTGGTTATCTTCTTTTACTTGGAGATTCCTTGATTCG
CAGAGTTTTAGGAGCTTTTACCTAAAACAATTTTGATTATATTGTTTTAC
AAATAAATTCCCTCCTttagtaaatatttttaatcTTGTAAGTAAAGAGA
AAAATGATgggattttatgaaaaaaatttattacttGTGTATTTCCAGTA
CCTTTTGTgcggttttttattttttgaaaaagaaaacatttatatTTTCT
GTTTCGTTAAATT
Run BLAST on NCBI

transcript from alignment at scaffold_172:116821..127055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050455 ID=TCONS_00050455|Name=TCONS_00050455|organism=Clytia hemisphaerica|type=transcript|length=10235bp|location=Sequence derived from alignment at scaffold_172:116821..127055+ (Clytia hemisphaerica)
NNAATTGGCTGCTCAGTGGATCACGTGACCGATTGGTCAAAGTCTTTGAT ATTCGAACGATGAAAGAAATTTCTACATTCCGCGGACACAAGAAAGAAGC TGCTTGTGAGTTACTTTTTCTGTGTCTTAGTTGATAAGAAAATCAGGGAA TACTTCAATATCCTAGGTTTAAGATGGCTGCTACGTCTTTATATAAGGGT ATTGGGAAAAGGGAAGTCCTTACTTAgatttggtgtttttaccaGAAGGA GGGTTAATAACTTTAATAAAAAAGCGTTATTTTGTAATTTGGGattgtaa agttttttgctGCAAATAACTTCTACCTTGTTCGAGAGTTAAATACATTG CCATTAAAGCCAGCCTTGTAAAAAATGCTTCATAAAATTTCTTCTTGAAC CTGTTTGAAAAGGTTGTCGAATCCAGGANAAAATGCTTCATAAAATTACT TCTTGAACCTGTTTGAAAAGGTTGTCAAATCCTGGGTAAAGGAGGGTTTG TCTTAAGATTAGCGACCTCCATTCATATTATGGTATAAATTTCATTATGA GAAATTTTGTTTGACTTGTTTTTATAGCTGTGAATTGGCATCCCATCTAC GAGAAGATGTTTGCAAGTGGAGGTTCGGATGGATCCATCATGTTTTGGTT GATGGGGTGAGTGTTCTTCCTCTACACAGAATGTATCTCTTTACCACGTA CCTTATTTGCTAAAAGTGAAGGTTTAAAATGTATGATTGACCAACACTGG AGATTTTTCAATGGAAAAGCTTTTATACGCAAATTATCTCCGGTATCTTA AAAAAAGGCCTTACAAACCATAAGAGGATGCGGACTTATAAGTGATTCTA TTTTTCTTAGAGATGGTTGAAAACGTTATAGTTTTgtggtttgtttttgt tttgttggtgaAATCTATGTCAGCTAGGAACAGACTGCTTGCTTTTGTTA CGGTTGAAGATTTTTCCTATCTGGGTTTGGCGGAATCGGTCAATTTAAAA GCACGAAGAAATCGAAtaaattccaaattttaaagGAAGGGTGATCAAAT TTCAACATTATTTTCAGGTGTGAAAAAGAGCTGGGTTGTATAGAAGGAGC TCATGACGGCATGATCTGGGATTTGAAATGGCATCCGCTGGGCCATATTT TGTGCACTGGCTCCAACGATCATACCACGTAAGACGCTATTACTTATCTT TTTTCACTAATAGTTCGGTGGCCCAGATCTTCCTATTTAGAATCGAGTAC TTTTTCGGTTATAAGATCGAGGTAgactccaggtaagtgacctaccggac atgcggcccttaagggtaggttttttggactttggaaagtgcgctgtaag ggttgatttgtgagcaaatgggaaaaagtgcattgtaagggtgtaaaatt tgagaaaataccaaattttcaggtaaaatttgagaaatttcgaaaaatta cactataagggtcgattttcatccagatttttcctgcactgtaagggtcc gattttagagacctgatttttggccgaacgtacggtggttttcaaaatcg agtgccccccccgggctcATCTTATGCGCAActtgttttaaaagtttctc tATTNAAtctaaattatttcgtagaggtcgatagacctgtgaaatataat tctatgaataatgCACGTGCATAAGTAATAATAATGATTGTTTAAAGGAT CAAATTAAAGAGGGAATCgaagttttttaagaaaaataactaTGCTGGAA CATTTTGGATGTTGATATATATTTGGCaaggatttttttgtttttgatgt tgTAATACAAGAAATCTTAATGAAAATATGCAGCGGTGTTCAAAGCACCG CCGACATGTGCTAAAAGTTTTTGAACGACATCAAGTTTGCATGCGGTCGT TCGACTTTTGGACAATGTGGAAAACAAGCTTTTCTTCTGTAAACAATCTT TAAGATGTTTTAATCCAATTTGGATCGTGAGATCATGGTTCATTTGGATT GCGTGTGAGTGGACAACGGTTTTTAGATCAGCCTCGGATTTGGCGAGTTG CTCAGATAATTTGTCTTTGGTGATGTTTGACATTCTAATTTCACTATGTG CTTCTGCCAACGATTTCTCATACTGTCCTCGTTGTTCACGCTTTTCTTTT ACTAATTTCCGGATCCAGAAATCCAATCCGTTTTGTTCGACAATCATTTC TTCCAAACGGCGTTCAAGAACTTCGTTCTGTTGATCCAAATCTTCGATGT CTTTATCGGCAGACTCTAAATCTGCTTGGAAATCGTTGTTATCTTTCTCC AAGAATTCTACTTTACACGCATACtcttccaactgaattttcaaCTCTTG CATTTGTCGCATGGACTGCTCAAATACGGCTCGTTCTCTACGGGAATTTT CCTCGATTTTTTCATTAGCAACACGAAGCATGTTTTTTAGCTGGATATTG TCTTGATCTTGTCGATTAATTTTCTGTTTGTAACTGGCAAGTTCAGTTTC GAGTTGCCTGATTTGTCCAGCTCCAATAAGGGAGGTTTTTTGACTCACTT CGCTTCGAAGATCGTCGTTTTCAATCTTGAGTTGGTGATTCTGTTGAACG AGTTCCTCAATTTGctgaaattaagaaaaaaagaaatttttaaaagacgA TGTAAATTTCCAAGCAGTTTTTCAAAGTTTATGCATACGGTTAACACTGT TGAGTTTGAATTGGAAAACTTAGCTAAAGATACTCTCAACTAACCTGTCT AGCTTGTTCGTAGAGTTCGCGGTAATTTACTTCGTTTGTTTTCTCCATCT TGGTAGAGAAATGAAGACAAACAATTTGTCCTTAACTGACTTTCTTGATA AAgtctttcttatttttttacaattttcacaaTTACTTGAGATGAAGTCT CTCACTATCTTCCAAGGAAtaatttatcaaacaaaattatTCTTAATAAC AATACTATCGACTACACTTGTCGCTTTCTGGGAAGATTTTGAAAACATTG ATTCGCAAAAAATGTtaattaacaaaaaatatatatttgacgtcagtttg aAATATTCGACGTCACAATTTGATGACGTCTTGTCCCTTTCGAAGTTTGG TACATTCCATTTTCGCTAACCGTAGTTTTCAAACGCTGTGTAATAATTTG TAATTACAGAAATCCTTGAAGGGTTCGCTTGCAGTGCCTTTGATCAGTAT GTTTCATGCTTTTGTCTCTGTTTAAGCCCCTTCCAGGAGACCACCGCCAT ATCTAGCGTGTAGCGAATACAGTAAACAATTAAACAAATCGACTGTTGGT CAAGGAGAAGTGACTGTTTAAAACACTCTCTTAATTTGTTATAGGAAATT TTGGACGCGGAATCGACCGGGAGACAAGATGCGAGACAAATACAATCTCA ATGTTTTGCCAACTGGCTTTGAAGACGATTATGGTATGTCTTTTTATTGT TACATTTATTTTGGTTGGTTCTCctttatcaattttttattgATTAAATC CATTTCCCCTGCCACGAGCTATAGTTTAACttatatttttgcatttctga aAAAATACCTGACTTTACTAGGATGCAGATCCTTTCTagatcaagtacca ttttaagCACAGTCATGGATATAAGTACGGATTAATACTGAACCAATTTT TTTGTAGAGTACGAGATACCGAACACATCACAATCAGAACTGGACACAAC TCAGGAGACAGACACCTCCATCAACGAGAACAGCAAAGGTATTAGACTTa gagtcgtttataatccgtgtgtaatacagtaataagGGTGTTATATGGTA ATACGATAATTATTACGGGATAACATCAGTTTGTNTGGTCAAGGAGAAGT GACTGTTTAAAACACTCTCTTAATTTGTTATAGGAAATTTTGGACGCGGA ATCGACCGGGAGACAAGATGCGAGACAAATACAATCTCAATGTTTTGCCA ACTGGCTTTGAAGACGATTATGGTATGTCTTTTTATTGTTACATTTATTT TGGTTGGTTCTCctttatcaattttttattgATTAAATCCATTTCCCCTG CCACGAGCTATAGTTTAActtatatttttgtatttctgaaaaaataCCTG ACTTTACTAGGATGCAGATCCTTTCTagatcaagtaccattttaagCACA GTCATGGATATAAGTACGGATTAATACTGAACCAATTTTTTTGTAGAGTA CGAGATACCGAACACATCACAATCAGAACTGGACACCACTCAGGAGACAG ACACCTCCATCAACGAGAACAGCAAAGGTATTAGACTTagagtcgtttat aatccgtgtaatacagtaatgtgggtgttatatgataatacgataattgt tacgggataacaTCAGTTTGAATAAACCTTCACTCGGCTCTCAATTTACA AATAGGAATTTTCCCCATGTATTACTACGCTATTTTCTCAGCCAATTTTC AACTTCGGCTTTGACTTGGAATCCGCCATTTATATTTCACCAGAGGTTTT ACATCTATCAAAAGCAATTTCTACCTGATGTGCTGCATTTTCGTAATTTG CCAggttaccgtattacttcgaataaacgccccttcttttaaacgcccct cgaataaacgcgcctcctaaaaggaaaattatttaataaacgcccccctc aaataaacgcccccttcaaATAATCGCCCTTTTAggagaggggcgtttat tagaaacttgtgactttaatacttcaataccagtgttaactgggtttgaa aaggaatattttagtcatttcttgtaaccagagcagttttcgaCGCAATT TTAAtcgttgaaccaaagaaattttgcactaaaatcctaataaagaacta aaacaaagggtatatttgctctaaattttcgactttagactaaaataatt caataatCACCCCCTTCTTttcccttcttttaaacgccccctcgaataaa ggCATcttctaaaatcgaaaaaaattaaataaacgcccaataaacgcccc gggcgtttattcgagtaATACggtatacagtggagtctcatAACTCGAAC TCGAACACGTACATGTACTCGGAACATTAATTTGTTTAAGGAGAGTTATA GAGATTCGATTAAATGAGCCACTGGACCACTGGACTAGGTTTCAATGGCA TTCCATCCTTACATAAGCCGATTCGTCCAACATTTTATATTGAATATGTA TTTCTGTAAGcaatgtttgaaaataattcgaatttcaatatcgtcaaata aaaattcttttgattctCAGGTGAACAAGAACAGGAAGGGAAGCCAGATT TAAATTCACCAGTGGTCAAAGCATTGTTGGAACAATCCACTCTCGAAGTT TCAAAACCCAAGGAAACAGACGTTCCTGTAAGAAGATTTTCACCTGTGTA ctttgactctcgctaattcgaacttacTCTaatcatgaaggtaataaaga tatagatggagagaaaacgtctcggtaatgacctgaATGGTCgttaaaat cttttataaatctattcaaagcggcttttctttgatgtaccatcattgga agcaaaacacatcaatttataactttataagaacagaaagagactgtttg gttgattttgaaaaacttaattttgccgaaaatccttgttaaaatgcgat tcgaaatagtttcaactgatgtaagactaaaagagtatattaatttcata gggacacatttttgggctggcattttgttaacattgagagttgcatcaca ttatcattgaaagtttcttatcttaaaatcttcacgtctaagttgGCAGC GGTTTTCAAACTCTGACAAAAAAATANGTTCTAACTTTCAAAAAGATTGA ATATTTCATTTTGAGTTATTGAGGGTTGCGAGTTATTTATGagggaaaaa gaaaagaatacaTTTCATGTTAAAGAGGTCTGAGCTAAGAAGACTCAGCT TTATTACATTCTTAGACCTTGAAATAAACAAGGAAAAATGTACCCGAGAT ATTATGTCCTGTTGAAGAATATTCGATAATAtctttaacacccctgtgtc agtgGTCCGGTCAGATTCGCCCCGGTCAGATTCGCCCCGGTCGATAACCC GGTGTAAAAATCGAGTGAAGAACAATGGGAATCTCAACCCGGGCAAAAAA CGAGAACTTTATCAAAAACCCCGATTTTTCTAAAGTGGTGAATGGCACAA ACCCAGGGAAAAATCCTGCTNcttattcccaaagcaaccaaacagctgtt tgcttccgatgataaatcagaatagaacaaaaggcattgactctccatct atctttattacctacATGCTCTAATGGGGAATTTCGAATGTTCGAATTAC ATagagattcaaattatagaaagtatattgagtgggtttctccttgacgg ggactgggaACAAGTTCGAATTCTATAAAGATTGATTCGAATGATAGAAG TTCGATTAAGAGATATTCTGCTGCACTTTTGATGAATGAAGTTCAATGTG TAACTCAAGTTAATTTGAGAGGTTCTAACTTTCAAAAAGATTGAATATTT CATTTTGAGTTATTGAGGGTTGCGAGTTATTTATGagggaaaaagaaaag aatacaTTTCATGTTAAAGAGGTCTGAGCTAAAAAGACTCAGCTTTATTA CATTCTTAGACCTTGAAATAAACAAGGAAAAATGTACCCGAGATATTATG TCCTGTTGAAGAATATTCGATAATAtctttaacacccctgtgtcagtgGT CCGGTCAGATTCGCCCCGGTCAGATTCGCCCCGGTCGATAACCCGGTGTA AAAATCGAGTGAAGAACAATGGGAATCTCAACCCGGGCAAAAAACGAGAA CTTTATCAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACCCAGC GACTGAAATCTCTACCCCGGTGGATATTTCTCATTTCAAAGTCACCCCGG TGAACTTTTAAGACCCAAtgggttactgagacaggggtgttcagGGTGCA TTTTGAACACTTTCTCTAGACTCCAAAATGTTAATGACAAATTGAACAAC ACAATACCTaatcaataattatttttatgCTAGGCACAAATTTATACATT CTCGCGAAGTAATCAACTGAAGAAGTTCCGTATCGATCCGGGAAAACAAA GGCGGGCTATCGAAGAAGCGGAAAAATCACAATACGATCACGAGAGACAG ATGGAAGAAAACATGGAGAAAACGAGAAGTAAGAAGCCTAGTTTATTTTG ATTCTTATTTTGAACTAAATCCGAATGGATATGTTGTTTTAGGCAGCCCA TCTTCcctggaaatgaaaaaaattcaacggAAAATGTTATGTTACCATCA ACTTCCTCTTTTATCTAAATTATAAGATTTACAATTTTTAACCATCAGAG CTTTCGTTTAATACACTAGACTAGCAACAATCTTTTGTTgattatattca tgatatgcaacattGCAATATCTTCTGACATTAAATCATGgttccaacag ctgattggttgtaagtggcGTAAAATTAGTCAATAcatcacttgcaacca atcagctgttgggtccgtggaagacattgcaatggtgcatatcatgaatt cttttttgaaatttgcaaaACAAGGACAATTTGGAGTTTCTTGCCAGAGA GCGAATTTCATTTGTCTATTTGAGGTCAGTTAGACATTTGATAATTTATC ACCGCGCTCCTTTATTTTTGTTCAGATCGACGTGCGATGGAGCAACAACA ACACGGAGGAGGGTTTATACCAGGCGCTCCTTCGTTGCTTACCATGGATG TTCCTGTACCCGACTTTTTAGAAGGTAAAACAACGATTTAGATTTTTCTT GATATATTGAACTTCCATTTACCCACCATTCTAAAAGTAGTAGAAAGAGA AAGATTTGAAAGTATATTTCAAAGTATGTGAACACTTTTTCCTCTATTAA ATGatgtatatataatatatgtagCACCAGTACTTGAAACAGgcctcttt ttcttcttcatcagttttcttcttcaatttgtaaaataatgaaataattt taGGCTTATAACAATCCACTCATTACTCGCTTTCCAACGAGGTGGAAATT TGTGAAAGTAAAGTCAAATTAAGTTTCCACATACTTTATAGACAGAAttt agaaagaaaaattgatttgTGCTTTATCCTGAATAACTTTTTTGACTCGT TTTATGCAAATTACAACAAAGCTAATCAACTGAGTGTTACTAGTTGATTA CCAGGAAACTTGGTAAATTTGTCCACCTTTTTCTATAGGAGAGTATTGGG ATGAAGGAGAAGAACCAAGTATGCATGAAGCTAAAAGAAGGTACAACCAA CGTACAAGGCCCAATGACGACGGGATGGACCCTAATGCTGGACACATCGG CCCTTCTGGATTCTATCACGGCCCTGATGAACATTTCGGACCTGGTGGCC CTCATGGACCACCACCAATGCGTCCGCCCTTTGATGGAGGTCGATTTCCA GGACCACGGCCTCGCTTTGATGGACCGCCGCCGCCACACGATTTTCATGG TCCACCGCCAGGGCATTTCAACGAAGGAGAGGGCTACGATGAGAATTGGG AAGGTGGAGGATACGAACCTCATCCTCCTTTCCAAGGACAATTTCAAGGT GGACCTAGATTCCGACCACATGGTCCTCCTGGTCCAGGTTTTGGTCCTGG TGGACCCCGTCCTCCTCGCATGAGAGGACCTCGCCCGAACTTCCACGGTG GTCGCCCACCACGCCCACCTTATTGAAAAGTTAGATTTTCATATGATGGA GAAGGAGTTACGGTTCCAATGAATGAATGGATGTGCTTCGGTGTCTTGTT AGAGCTCTGATAGAAAATGCAGTGAGCCAATATTGCTGGTTATCTTCTTT TACTTGGAGATTCCTTGATTCGCAGAGTTTTAGGAGCTTTTACCTAAAAC AATTTTGATTATATTGTTTTACAAATAAATTCCCTCCTttagtaaatatt tttaatcTTGTAAGTAAAGAGAAAAATGATgggattttatgaaaaaaatt tattacttGTGTATTTCCAGTACCTTTTGTgcggttttttattttttgaa aaagaaaacatttatatTTTCTGTTTCGTTAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031954XLOC_031954Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050455-exon-scaffold_172-1491911889:116821..116925TCONS_00050455-exon-scaffold_172-1491911889:116821..116925Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:116821..116925TCONS_00050455-exon-scaffold_172-1510915933:116821..116925Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:116821..116925TCONS_00050455-exon-scaffold_172-1575043694:116821..116925Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:117398..117476TCONS_00050455-exon-scaffold_172-1491911889:117398..117476Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:117398..117476TCONS_00050455-exon-scaffold_172-1510915933:117398..117476Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:117398..117476TCONS_00050455-exon-scaffold_172-1575043694:117398..117476Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:117888..117998TCONS_00050455-exon-scaffold_172-1491911889:117888..117998Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:117888..117998TCONS_00050455-exon-scaffold_172-1510915933:117888..117998Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:117888..117998TCONS_00050455-exon-scaffold_172-1575043694:117888..117998Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:120165..120253TCONS_00050455-exon-scaffold_172-1491911889:120165..120253Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:120165..120253TCONS_00050455-exon-scaffold_172-1510915933:120165..120253Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:120165..120253TCONS_00050455-exon-scaffold_172-1575043694:120165..120253Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:120478..120558TCONS_00050455-exon-scaffold_172-1491911889:120478..120558Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:120478..120558TCONS_00050455-exon-scaffold_172-1510915933:120478..120558Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:120478..120558TCONS_00050455-exon-scaffold_172-1575043694:120478..120558Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:122091..122197TCONS_00050455-exon-scaffold_172-1491911889:122091..122197Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:122091..122197TCONS_00050455-exon-scaffold_172-1510915933:122091..122197Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:122091..122197TCONS_00050455-exon-scaffold_172-1575043694:122091..122197Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:125004..125148TCONS_00050455-exon-scaffold_172-1491911889:125004..125148Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:125004..125148TCONS_00050455-exon-scaffold_172-1510915933:125004..125148Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:125004..125148TCONS_00050455-exon-scaffold_172-1575043694:125004..125148Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:125646..125744TCONS_00050455-exon-scaffold_172-1491911889:125646..125744Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:125646..125744TCONS_00050455-exon-scaffold_172-1510915933:125646..125744Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:125646..125744TCONS_00050455-exon-scaffold_172-1575043694:125646..125744Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1491911889:126209..127055TCONS_00050455-exon-scaffold_172-1491911889:126209..127055Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1510915933:126209..127055TCONS_00050455-exon-scaffold_172-1510915933:126209..127055Clytia hemisphaericaexon
TCONS_00050455-exon-scaffold_172-1575043694:126209..127055TCONS_00050455-exon-scaffold_172-1575043694:126209..127055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:116821..127055 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 8.82365 4.18893 2.39755 7.08925 0.993158 2.09978 2.85226 0.896783 2.41158 1.56743 0.0492757 0.0867094 0.109727 0 0 0 0 0 0 0 12.2125 6.80594 0 0 0 0
Blast
BLAST of TCONS_00050455 vs. Swiss-Prot (Human)
Match: WDR33 (pre-mRNA 3' end processing protein WDR33 OS=Homo sapiens GN=WDR33 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 9.474e-58
Identity = 91/131 (69.47%), Postives = 110/131 (83.97%), Query Frame = 3
Query:    3 NWLLSGSRDRLVKVFDIRTMKE-ISTFRGHKKEAASVNWHPIYEKMFASGGSDGSIMFWLMGCEKELGCIEGAHDGMIWDLKWHPLGHILCTGSNDHTTKFWTRNRPGDKMRDKYNLNVLPTGFEDDYEYE 392
            NWLL+ SRD L K+FDIR +KE +  FRGHKKEA +V WHP++E +FASGGSDGS++FW +G EKE+G +E AH+GMIW L WHPLGHILC+GSNDHT+KFWTRNRPGDKMRD+YNLN+LP   ED  EY+
Sbjct:  301 NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPGMSEDGVEYD 431          
The following BLAST results are available for this feature:
BLAST of TCONS_00050455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR339.474e-5869.47pre-mRNA 3' end processing protein WDR33 OS=Homo s... [more]
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